FFCP PHASE1:Hg19::chr1:160318861..160318881,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:160318861..160318881,+ | |||
|id=chr1:160318861..160318881,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002619;3.09e-14;3!CL:0000346;2.59e-07;3!CL:1000428;2.59e-07;3!CL:0002541;3.02e-07;3!CL:0000775;3.02e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,2.02e-14,3;CL:0000775,2.22e-07,3;CL:0000346,2.68e-07,3;CL:1000428,2.68e-07,3;CL:0002541,4.53e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;9.99e-08;10!UBERON:0000158;9.99e-08;10!UBERON:0000412;2.59e-07;3!UBERON:0001992;2.59e-07;3!UBERON:0003124;3.02e-07;3!UBERON:0000920;3.02e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.40e-08,14;UBERON:0000158,4.40e-08,14;UBERON:0004923,1.28e-07,66;UBERON:0000412,2.68e-07,3;UBERON:0001992,2.68e-07,3;UBERON:0000920,4.53e-07,3 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0.281908808191942,1.0007329835313,0.893922188854576,0,0,0.631719873426831,0.783556884599516,0,0,0,0,0,0,1.34465029290355,0.602694528023977,0.730310090387373,0,0,0.204000691244253,0,0,0.136874425072884,0,0,0.0821005894499457,0,0,0,0,0,0.30120591877825,0,0.0774672005803016,0.142169232487422,0,0,0,0,1.79132379391939,1.6194683300949,1.03030227053675,0.872389432677388,0.755751887377619,0.242584061187816,0.232429036905685,0.411167888021826,0,0,0,0.236482229888585,0.689491361473237,0.645484683583826,1.35426486594342,0,0,0,1.53041946185451,0,0.639337125799041,0,0.598390972864896,0,0,0,0,0.251248665256743,0,0.217188844705117,0.605399502633369,0,0.316462387440884,0,1.06302149982522,0.419317291016752,0.336985893439485,0.450530678524519,0.32145117339416,0,0.59675003159727,0,0,0.546138611262131,0,0.426730222566507,0.800791974072025,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0,0,0,0,0,0,0,0.334231370655521,0,0,0.270803863765016,0,0.260118695119756,0,0.276350017785848,0.289803085735052,0,0,0,0.339928028092699,0,0,0.506039384039006,0,0,0,0.451725357233318,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0.0945348171640679,0,0.263504357079378,0.392937226493138,0.364295288292542,0,0,0.348259474598534,0.531831842075461,0.238490624305342,0,0,0,0,0.347140501607594,0.56530794192401,0.419499436209906,0.550236083880135,0,0.775250277507987,0,0,0,0,0.488124115096339,0.735326160691737,0.81014194788176,0.17859945656816,0,0,0,0,0.183201743930407,0,0,0,0.993943903390637,0.506522046658319,0.397227542439656,3.44203944898576,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0,0.163461903113459,0.151357427644931,0,0,0.624320153660641,0,0.298897361103602,0.117434498643765,0.161872944368132,0,0,0,0.103325781175765,1.18800285728205,1.23633464639278,1.82032272387605,0,0.168336113954066,0,0,0,0.30648779579902,0.45071417671979,0.226864366320042,0.358779271377724,0,0.423863802319124,0.300091096084402,0.206105058476878,0.515281080091258,0.18611685633159,0,0.194874010322397,0.504867548488229,0.276149695926898,0.80823028409406,1.06502877754984,0.10075209822764,0.169560592310488,0.386521706326594,0.272746120590835,0.286804595389004,0.121973706129595,0,0.116193942869518,0.310983165046111,0,0,3.12899064659632,1.28648187638577,0,0.464367928031979,0,0.118306800039844,0,0,0.441175890929576,0,0,0.134831308160164,0.196221465125346,0.769494313892781,0,0,0.4115740113314,0,1.26755034821831,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.231860809950154,0,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0.492434012174795,0.468008530278475,0.297262324577456,0,0.503946384596579,0.283550194484773,0,0,0,0.492663237895943,0.616339038092582,0.414656231081544,0.864719720501769,1.13618190083742,0.063497894292169,0,1.17217447210047,0,0,0.300343057843917,0,0,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,1.04007436911366,0,0,0,0.428933980974443,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0.502257091432126,2.10833939483032,0.239624855491583,0,0,0,0.410952645100767,0.716243852959582,0.112085143993527,0,0,0.128343036279748,0,0,0,0.167516265334349,0,1.49801404789436,2.99161459204025,0,0.12269149171914,0,0,0.415941723061614,0,0.157702415033935,0.117141414992713,0.601892199455438,0,1.03473071292505,0,0.184369168541703,0.347534457872331,0.391602314925481,0.686286847621712,0,0.215714200818617,0.106727557803444,0.606255142892519,1.66435439510497,0.30239029332968,0.496215615637554,0.306923946576125,0.561320188866147,1.53766979106841,0,0,0,0.154209693802656,0.177561725313127,0.164254312027618,0,0,0.483437798366489,1.80455823272956,0.0920809889358963,0.68888668898764,0.182091168006717,1.04899531967539,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0.650756789328606,1.44257416306811,0.0915694648183434,0.247528499761764,0,0,0,0.193341436584244,0,0.15350367472613,0,0.322260734604821,0.145016693914229,0,0.178064071293475,1.4875642382488,0.192190067365106,0.127612712494584,0.4046311234222,0.464845549297286,2.20368642781448,0,0.616067160352178,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0.42793898803392,0.318203247925937,0,0.179872457583315,0.823611089208164,0.117812402345686,0.404364963146632,0,0,0,0.487426979262569,1.05650146756755,0.682499557039929,0.565621727814851,0,0,1.99031692572366,0.876901770507525,0,0,0,0.6196469961995,0,0,0.0982490410131212,0,0.354761064070598,0.844430541190656,0,0,0,0,0,1.08890984861323,1.03558180854457,0,0,0.443430153536676,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0.371606350251437,0,0.0711418433484141,0,0,0,0.423347165447766,0,0.280797178113459,0,0,0,0.338583555603207,0,0,0,0,0,0.671028323677248,0,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0.485442086998054,0,0,0,2.37571744666111,0,0,0,0,0,0,0,0.276283915531148,0.251932747854276,0.102268682502155,0,0.311039587661807,0.0898683511473268,0.179021174675609,0,0.493217028184668,2.3948309234694,0,0,0.185536196323703,0,0.260427761085233,0.174919999992391,0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| |||
|short_description=p@chr1:160318861..160318881,+ | |||
}} |
Revision as of 21:47, 10 January 2014
Short description: | p@chr1:160318861..160318881, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:160318861..160318881, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 2.02e-14 | 3 |
neutrophil | 2.22e-07 | 3 |
hair follicle dermal papilla cell | 2.68e-07 | 3 |
stem cell of epidermis | 2.68e-07 | 3 |
chorionic membrane mesenchymal stem cell | 4.53e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.40e-08 | 14 |
membranous layer | 4.40e-08 | 14 |
organ component layer | 1.28e-07 | 66 |
dermal papilla | 2.68e-07 | 3 |
papillary layer of dermis | 2.68e-07 | 3 |
egg chorion | 4.53e-07 | 3 |