FFCP PHASE1:Hg19::chr22:30000137..30000142,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:30000137..30000142,- | |||
|description=CAGE_peak_at_chr22:30000137..30000142,- | |description=CAGE_peak_at_chr22:30000137..30000142,- | ||
|id=chr22:30000137..30000142,- | |id=chr22:30000137..30000142,- | ||
|ontology_enrichment_celltype=CL:0000359!4.96e-09!32;CL:0002393!2.56e-08!9;CL:0002397!2.56e-08!9;CL:0000192!7.77e-07!42;CL:0000514!7.77e-07!42 | |ontology_enrichment_celltype=CL:0000359!4.96e-09!32;CL:0002393!2.56e-08!9;CL:0002397!2.56e-08!9;CL:0000192!7.77e-07!42;CL:0000514!7.77e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0002595;1.48e-18;5!CL:0002593;2.45e-12;2!CL:0002144;1.17e-08;3!CL:0000623;1.17e-08;3!CL:0002592;1.17e-08;3!CL:1000306;6.49e-07;4!CL:0002547;6.49e-07;4!CL:0000359;6.63e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,1.77e-18,5;CL:0002593,2.90e-12,2;CL:0002592,9.66e-09,3;CL:0002144,1.04e-08,3;CL:0000623,1.12e-08,3;CL:0000825,1.12e-08,3;CL:1000306,6.50e-07,4;CL:0002547,6.50e-07,4;CL:0000359,7.77e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!1.59e-14!42;UBERON:0003509!1.59e-14!42;UBERON:0004572!1.59e-14!42;UBERON:0004573!2.92e-11!33;UBERON:0004571!2.92e-11!33;UBERON:0001981!2.10e-10!60;UBERON:0007500!2.10e-10!60;UBERON:0004537!2.10e-10!60;UBERON:0006965!2.10e-10!60;UBERON:0002049!2.62e-09!79;UBERON:0007798!2.62e-09!79;UBERON:0000055!4.35e-09!69;UBERON:0004872!4.97e-07!84 | |ontology_enrichment_uberon=UBERON:0001637!1.59e-14!42;UBERON:0003509!1.59e-14!42;UBERON:0004572!1.59e-14!42;UBERON:0004573!2.92e-11!33;UBERON:0004571!2.92e-11!33;UBERON:0001981!2.10e-10!60;UBERON:0007500!2.10e-10!60;UBERON:0004537!2.10e-10!60;UBERON:0006965!2.10e-10!60;UBERON:0002049!2.62e-09!79;UBERON:0007798!2.62e-09!79;UBERON:0000055!4.35e-09!69;UBERON:0004872!4.97e-07!84 | ||
|ontology_enrichment_uberon_v019=UBERON:0003834;1.48e-18;5!UBERON:0001533;1.48e-18;5!UBERON:0004573;3.00e-14;33!UBERON:0004571;3.00e-14;33!UBERON:0003513;1.49e-13;7!UBERON:0002456;2.45e-12;2!UBERON:0001637;1.21e-11;42!UBERON:0003509;1.21e-11;42!UBERON:0004572;1.21e-11;42!UBERON:0007500;9.43e-11;56!UBERON:0001981;9.43e-11;56!UBERON:0004537;9.43e-11;56!UBERON:0003498;1.17e-08;3!UBERON:0010523;1.17e-08;3!UBERON:0005985;1.17e-08;3!UBERON:0001915;1.17e-08;3!UBERON:0001621;1.17e-08;3!UBERON:0001982;1.17e-08;3!UBERON:0000055;3.82e-07;65!UBERON:0004797;6.49e-07;4!UBERON:0000415;6.49e-07;4!UBERON:0007240;6.49e-07;4!UBERON:0005742;6.49e-07;4!UBERON:0005734;6.49e-07;4!UBERON:0004664;6.49e-07;4!UBERON:0004663;6.49e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,1.77e-18,5;UBERON:0001533,1.77e-18,5;UBERON:0004573,5.87e-17,33;UBERON:0004571,5.87e-17,33;UBERON:0007500,1.58e-13,59;UBERON:0001981,1.58e-13,59;UBERON:0004537,1.58e-13,59;UBERON:0006965,1.58e-13,59;UBERON:0003513,1.69e-13,7;UBERON:0001637,2.25e-13,42;UBERON:0003509,2.25e-13,42;UBERON:0004572,2.25e-13,42;UBERON:0002456,2.90e-12,2;UBERON:0000055,9.72e-12,68;UBERON:0002049,3.13e-10,78;UBERON:0007798,3.13e-10,78;UBERON:0004872,1.30e-09,83;UBERON:0001621,9.66e-09,3;UBERON:0010523,1.04e-08,3;UBERON:0001915,1.04e-08,3;UBERON:0001982,1.04e-08,3;UBERON:0004535,2.67e-07,109;UBERON:0001009,4.22e-07,112;UBERON:0000415,6.50e-07,4;UBERON:0007240,6.50e-07,4;UBERON:0005742,6.50e-07,4;UBERON:0005734,6.50e-07,4;UBERON:0004664,6.50e-07,4;UBERON:0004663,6.50e-07,4;UBERON:0003914,8.59e-07,117 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0.975865597581014,0,0,0.313454721478088,0,0.136874425072884,0.125542639594803,0,0,0,0.786728553697808,0,0,0,0,0,0,0,0,0.553995408531877,0,0.434021741431704,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0.224723484445085,0.306083892370903,0,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0.521482918420201,0.217188844705117,0,0,0,0.211255286311942,0,0.838634582033504,0.22465726229299,0.150176892841506,0,0.285012743741249,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786839080455332,0.393010762749165,0.411202997999018,0,0,0.473447805734733,0,0,0,0.443067789167242,0,0.128091319725675,0,0.328875809207352,0,0,0.14828656316206,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,1.00803371612366,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0.973269740605272,0,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0.238490624305342,0,0,0,1.72046919021225,0.347140501607594,0,0.419499436209906,0,0.835979866147242,0,0,0,0,1.52054421143703,0.732186172644509,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,3.44263870114369,0,0,0.560677600142307,0,0.49333509683432,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.179389635688862,0.213557388818567,0,0,0.103052529238439,0.257640540045629,0,0,0,0,0,0.161646056818812,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0.433099343283221,0,0,0,0.858486162094873,0,0,0,0,0,0.141775097242386,0,0,0,0,0.088048434013226,1.03664057770386,0.144119953416961,0.6312121671319,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.868687840005475,0.205476322550383,0,0.112085143993527,0.591092280605782,1.50939302401662,0.385029108839245,0,0,0,0,0,0.749007023947182,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0.924100740528266,0.532306030317022,0.869932992075073,0.37064843820784,0.286249773483982,0,0,0,0.255897791311334,0,0,0,0,0,0,0.606547444719948,1.58510321173008,0.421258456238981,0,0,1.05650146756755,0,0,0,0,0,1.31535265576129,0,0,0.405820753925408,0.6196469961995,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0.31900115973192,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0.264768380074501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.254019996197353,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0.414706207840855,0,0,0,0.380805212168795,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0.521988583930423,0,0,0,0.358177682162975,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0.19998739585493,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.462102664601353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0.975865597581014,0,0,0.313454721478088,0,0.136874425072884,0.125542639594803,0,0,0,0.786728553697808,0,0,0,0,0,0,0,0,0.553995408531877,0,0.434021741431704,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0.224723484445085,0.306083892370903,0,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0.521482918420201,0.217188844705117,0,0,0,0.211255286311942,0,0.838634582033504,0.22465726229299,0.150176892841506,0,0.285012743741249,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786839080455332,0.393010762749165,0.411202997999018,0,0,0.473447805734733,0,0,0,0.443067789167242,0,0.128091319725675,0,0.328875809207352,0,0,0.14828656316206,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,1.00803371612366,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0.973269740605272,0,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0.238490624305342,0,0,0,1.72046919021225,0.347140501607594,0,0.419499436209906,0,0.835979866147242,0,0,0,0,1.52054421143703,0.732186172644509,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,3.44263870114369,0,0,0.560677600142307,0,0.49333509683432,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.179389635688862,0.213557388818567,0,0,0.103052529238439,0.257640540045629,0,0,0,0,0,0.161646056818812,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0.433099343283221,0,0,0,0.858486162094873,0,0,0,0,0,0.141775097242386,0,0,0,0,0.088048434013226,1.03664057770386,0.144119953416961,0.6312121671319,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.868687840005475,0.205476322550383,0,0.112085143993527,0.591092280605782,1.50939302401662,0.385029108839245,0,0,0,0,0,0.749007023947182,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0.924100740528266,0.532306030317022,0.869932992075073,0.37064843820784,0.286249773483982,0,0,0,0.255897791311334,0,0,0,0,0,0,0.606547444719948,1.58510321173008,0.421258456238981,0,0,1.05650146756755,0,0,0,0,0,1.31535265576129,0,0,0.405820753925408,0.6196469961995,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0.31900115973192,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0.264768380074501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0.254019996197353,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0.414706207840855,0,0,0,0.380805212168795,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0.521988583930423,0,0,0,0.358177682162975,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0.19998739585493,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.462102664601353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr22:30000137..30000142,- | |short_description=p@chr22:30000137..30000142,- | ||
}} | }} |
Latest revision as of 20:01, 28 July 2015
Short description: | p@chr22:30000137..30000142, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:30000137..30000142, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 1.77e-18 | 5 |
smooth muscle cell of the internal thoracic artery | 2.90e-12 | 2 |
smooth muscle cell of the coronary artery | 9.66e-09 | 3 |
capillary endothelial cell | 1.04e-08 | 3 |
natural killer cell | 1.12e-08 | 3 |
pro-NK cell | 1.12e-08 | 3 |
fibroblast of tunica adventitia of artery | 6.50e-07 | 4 |
fibroblast of the aortic adventitia | 6.50e-07 | 4 |
vascular associated smooth muscle cell | 7.77e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
thoracic segment blood vessel | 1.77e-18 | 5 |
subclavian artery | 1.77e-18 | 5 |
systemic artery | 5.87e-17 | 33 |
systemic arterial system | 5.87e-17 | 33 |
epithelial tube open at both ends | 1.58e-13 | 59 |
blood vessel | 1.58e-13 | 59 |
blood vasculature | 1.58e-13 | 59 |
vascular cord | 1.58e-13 | 59 |
trunk blood vessel | 1.69e-13 | 7 |
artery | 2.25e-13 | 42 |
arterial blood vessel | 2.25e-13 | 42 |
arterial system | 2.25e-13 | 42 |
internal thoracic artery | 2.90e-12 | 2 |
vessel | 9.72e-12 | 68 |
vasculature | 3.13e-10 | 78 |
vascular system | 3.13e-10 | 78 |
splanchnic layer of lateral plate mesoderm | 1.30e-09 | 83 |
coronary artery | 9.66e-09 | 3 |
microcirculatory vessel | 1.04e-08 | 3 |
endothelium of capillary | 1.04e-08 | 3 |
capillary | 1.04e-08 | 3 |
cardiovascular system | 2.67e-07 | 109 |
circulatory system | 4.22e-07 | 112 |
artery wall | 6.50e-07 | 4 |
tunica adventitia of artery | 6.50e-07 | 4 |
adventitia | 6.50e-07 | 4 |
tunica adventitia of blood vessel | 6.50e-07 | 4 |
aorta tunica adventitia | 6.50e-07 | 4 |
aorta wall | 6.50e-07 | 4 |
epithelial tube | 8.59e-07 | 117 |