FFCP PHASE1:Hg19::chr2:113382182..113382198,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:113382182..113382198,+ | |||
|description=CAGE_peak_at_chr2:113382182..113382198,+ | |description=CAGE_peak_at_chr2:113382182..113382198,+ | ||
|id=chr2:113382182..113382198,+ | |id=chr2:113382182..113382198,+ | ||
|ontology_enrichment_celltype=CL:0000548!1.51e-11!679;CL:0000004!1.51e-11!679;CL:0000255!1.51e-11!679;CL:0000222!1.70e-11!119;CL:0000012!3.58e-11!682;CL:0000003!7.70e-11!722;CL:0000359!3.21e-10!32;CL:0000055!2.86e-09!180;CL:0000057!3.64e-09!75;CL:0000144!1.39e-08!625;CL:0000076!1.39e-08!62;CL:0000192!2.59e-08!42;CL:0000514!2.59e-08!42;CL:0002371!7.85e-08!591;CL:0000680!1.59e-07!57;CL:0000056!1.59e-07!57;CL:0000355!1.59e-07!57;CL:0000220!2.12e-07!246;CL:0002321!3.82e-07!248;CL:0000187!5.77e-07!54;CL:0000077!6.73e-07!19 | |ontology_enrichment_celltype=CL:0000548!1.51e-11!679;CL:0000004!1.51e-11!679;CL:0000255!1.51e-11!679;CL:0000222!1.70e-11!119;CL:0000012!3.58e-11!682;CL:0000003!7.70e-11!722;CL:0000359!3.21e-10!32;CL:0000055!2.86e-09!180;CL:0000057!3.64e-09!75;CL:0000144!1.39e-08!625;CL:0000076!1.39e-08!62;CL:0000192!2.59e-08!42;CL:0000514!2.59e-08!42;CL:0002371!7.85e-08!591;CL:0000680!1.59e-07!57;CL:0000056!1.59e-07!57;CL:0000355!1.59e-07!57;CL:0000220!2.12e-07!246;CL:0002321!3.82e-07!248;CL:0000187!5.77e-07!54;CL:0000077!6.73e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0000077;8.96e-10;19!CL:0000174;1.07e-08;3!CL:0002595;2.08e-08;5!CL:0002166;8.44e-08;3!CL:0000197;6.34e-07;6!CL:0000098;6.34e-07;6!CL:0002167;6.34e-07;6 | |ontology_enrichment_celltype_v019=CL:0000077;8.96e-10;19!CL:0000174;1.07e-08;3!CL:0002595;2.08e-08;5!CL:0002166;8.44e-08;3!CL:0000197;6.34e-07;6!CL:0000098;6.34e-07;6!CL:0002167;6.34e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000077,8.15e-10,19;CL:0000057,3.75e-09,76;CL:0000174,1.34e-08,3;CL:0002595,1.68e-08,5;CL:0002166,3.54e-08,3;CL:0000197,6.71e-07,6;CL:0000098,6.71e-07,6;CL:0002167,6.71e-07,6 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;3.13e-10;14!DOID:193;5.02e-08;29!DOID:120;3.09e-07;27!DOID:0060072;5.19e-07;4 | |ontology_enrichment_disease_v019=DOID:2394;3.13e-10;14!DOID:193;5.02e-08;29!DOID:120;3.09e-07;27!DOID:0060072;5.19e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,3.12e-10,14;DOID:193,5.00e-08,29;DOID:120,2.96e-07,27;DOID:0060072,4.54e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001637!3.64e-18!42;UBERON:0003509!3.64e-18!42;UBERON:0004572!3.64e-18!42;UBERON:0001981!1.61e-13!60;UBERON:0007500!1.61e-13!60;UBERON:0004537!1.61e-13!60;UBERON:0006965!1.61e-13!60;UBERON:0004573!1.77e-13!33;UBERON:0004571!1.77e-13!33;UBERON:0004872!1.98e-12!84;UBERON:0000055!1.15e-10!69;UBERON:0002049!2.24e-10!79;UBERON:0007798!2.24e-10!79;UBERON:0004535!1.86e-09!110;UBERON:0000947!5.29e-09!21;UBERON:0010191!5.29e-09!21;UBERON:0000914!8.33e-09!83;UBERON:0002329!8.33e-09!83;UBERON:0003077!8.33e-09!83;UBERON:0003059!8.33e-09!83;UBERON:0007282!8.33e-09!83;UBERON:0009618!8.33e-09!83;UBERON:0007285!8.33e-09!83;UBERON:0001009!9.38e-09!113;UBERON:0000486!1.17e-07!82;UBERON:0004290!1.42e-07!70;UBERON:0002204!1.59e-07!167;UBERON:0000926!2.64e-07!448;UBERON:0004120!2.64e-07!448;UBERON:0006603!2.64e-07!448;UBERON:0003081!7.90e-07!216 | |ontology_enrichment_uberon=UBERON:0001637!3.64e-18!42;UBERON:0003509!3.64e-18!42;UBERON:0004572!3.64e-18!42;UBERON:0001981!1.61e-13!60;UBERON:0007500!1.61e-13!60;UBERON:0004537!1.61e-13!60;UBERON:0006965!1.61e-13!60;UBERON:0004573!1.77e-13!33;UBERON:0004571!1.77e-13!33;UBERON:0004872!1.98e-12!84;UBERON:0000055!1.15e-10!69;UBERON:0002049!2.24e-10!79;UBERON:0007798!2.24e-10!79;UBERON:0004535!1.86e-09!110;UBERON:0000947!5.29e-09!21;UBERON:0010191!5.29e-09!21;UBERON:0000914!8.33e-09!83;UBERON:0002329!8.33e-09!83;UBERON:0003077!8.33e-09!83;UBERON:0003059!8.33e-09!83;UBERON:0007282!8.33e-09!83;UBERON:0009618!8.33e-09!83;UBERON:0007285!8.33e-09!83;UBERON:0001009!9.38e-09!113;UBERON:0000486!1.17e-07!82;UBERON:0004290!1.42e-07!70;UBERON:0002204!1.59e-07!167;UBERON:0000926!2.64e-07!448;UBERON:0004120!2.64e-07!448;UBERON:0006603!2.64e-07!448;UBERON:0003081!7.90e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0003834;2.08e-08;5!UBERON:0001533;2.08e-08;5 | |ontology_enrichment_uberon_v019=UBERON:0003834;2.08e-08;5!UBERON:0001533;2.08e-08;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,1.68e-08,5;UBERON:0001533,1.68e-08,5;UBERON:0001637,2.78e-07,42;UBERON:0003509,2.78e-07,42;UBERON:0004572,2.78e-07,42;UBERON:0004573,4.46e-07,33;UBERON:0004571,4.46e-07,33;UBERON:0010188,5.26e-07,6;UBERON:0002539,5.26e-07,6;UBERON:0008816,5.26e-07,6 | |||
|phase1_expression=0.54503513781167,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,1.34465029290355,0.602694528023977,0,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,1.83884244895785,0,0.739508020333575,0,0,0,0.553995408531877,0.601633342410425,0.217010870715852,0,0,0,0.581592955118259,1.13362783106643,0.970336244751265,0.464858073811369,0,0.309706370895104,0.28769239232215,0,0.236482229888585,0.344745680736619,0.645484683583826,0,1.31769637679823,0,0.674170453335254,0.306083892370903,0.320929027076094,0,0,0.398927315243264,0,0.290209238628584,0,0,0.502497330513487,0,0.65156653411535,0,0,0.316462387440884,0.211255286311942,0,0,0.44931452458598,0.150176892841506,0,0.855038231223746,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0.167186495390678,0,0,0,0.891283655081389,0,0,0.541607727530031,0.25618263945135,0.390178042679635,0.164437904603676,0,0.869409257205157,0,0,0,0.226618685395132,0,0,0,0,0,0.950452044448374,0.150575119077773,0.127986611154418,0,0,0,0.201606743224732,0,0,0,0.670700859703636,0.12786256184353,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0,0.364295288292542,0,0,0.174129737299267,0.797747763113191,0,0,0,1.39133685156694,2.58070378531837,0.347140501607594,2.26123176769604,0.838998872419812,0.275118041940067,0.417989933073621,0,0.71153252537342,0,0,0,0,0.367663080345869,0,0.357198913136319,0.22452937262617,0.450445921933289,0,0.949265659568129,1.09921046358244,0,0,0.436094052142534,0,0.506522046658319,2.64818361626438,0.573673241497627,1.06400514659507,0,0,0,3.42332138939743,0.538842688278752,1.63461903113459,0,0,1.17160715916898,1.87296046098192,1.1409436430889,1.04614076386261,0.469737994575059,0.161872944368132,0.280901613404497,8.16616685019573,1.35117749042945,2.58314452939414,0,0,0,0,1.0100166837244,0.875829639103749,4.43302584774693,0,0,0.150238058906597,0.453728732640084,0.538168907066586,0,0,1.50045548042201,0.412210116953756,0,0,0.168776332241266,0.194874010322397,0,0,1.93975268182574,0.355009592516614,0.302256294682921,0,0.386521706326594,0.272746120590835,1.43402297694502,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0,0.241011029883482,0.110293972732394,0,0,0.404493924480493,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,1.20725313949488,0,0,0.185176890317059,0.325808305310325,0,0,0,0,0,0,0,0.790204397959275,0,0,0.936017060556951,0.594524649154913,1.87467667973554,1.6798212819886,1.41775097242386,0.268675568108545,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0.600686115687835,0,0.784917590417525,0,0.80672114403045,0.129271715757778,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,3.01439377059586,1.74306691720059,3.89894665610022,0,0,0,0.239624855491583,0,0,1.30303176000821,0.821905290201534,0,0,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0.542530047399471,1.66376689224646,1.24900292158013,1.26161932027148,4.4513737697231,0,0,0,0,0,0.347534457872331,0.195801157462741,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0,0,1.48418066444991,0.154209693802656,0.710246901252508,0.574890092096664,3.63478100428535,0.464841513839837,0,1.00253235151642,0,0.459257792658427,0,0,0,0.0770153371044148,0,0,0,0,0.680374821106063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,1.6068392984416,0,0.308097234229289,0,0,0.107420244868274,0,0,0.0890320356467374,0.165284915360978,0,0.765676274967505,0,0.464845549297286,0.62962469366128,0.6970372701606,0.308033580176089,2.66153015158511,0,0.18532421910392,0.715624433709956,0,0.316379424718726,0.190630193923825,0,0,0.95460974377781,0.78494864019923,0,0,0.117812402345686,0.808729926293264,0,0.842516912477962,0,1.70599442741899,2.11300293513511,0.272999822815972,0.141405431953713,2.26016233240486,0,1.32687795048244,2.63070531152258,0,0.655894752046633,1.21746226177622,0.92947049429925,0.845086807596724,0,0,0.35667105148125,0,0.211107635297664,0,0.75894634753143,0.349934720244983,0.0962221127255121,0,0,0.376575203107117,0,0,0.443430153536676,0.229723400206959,0,0,0.569647187174163,0.714695326373367,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334330152832435,0,0.23874448473769,0,0,0,0,0.779160935160341,0,0,0.19924798825107,0,0,0,0,0.933118762985422,0,0,0.511572370226872,0.0986434056369336,0,5.55684950723184,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0.31396051279005,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0.242780379534093,0,0,0,0,0,0,3.98792323624311,3.64091151463049,7.53439004177341,4.77889719091835,0,1.10939738410511,0,0.195984794828755,0,0,0.171986032471617,0.0967563312890851,0.219267951258557,0.328461828212837,0.0969890164884194,0,0,3.42604811616877,3.97429223405979,0,0,0.0801588202515337,0,0,0,0,0,0,2.23654564017779,0.707082103850386,0.135904206073614,0.523014231561666,0,0,0,0,0,1.28929632425987,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0.896436696664224,0.383830394638891,0,0,0,0,7.77799342081141,2.61269888087527,0,0.164185041498678,2.5558203267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| ||
|short_description=p@chr2:113382182..113382198,+ | |short_description=p@chr2:113382182..113382198,+ | ||
}} | }} |
Latest revision as of 23:19, 28 July 2015
Short description: | p@chr2:113382182..113382198, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:113382182..113382198, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 8.15e-10 | 19 |
fibroblast | 3.75e-09 | 76 |
steroid hormone secreting cell | 1.34e-08 | 3 |
smooth muscle cell of the subclavian artery | 1.68e-08 | 5 |
epithelial cell of Malassez | 3.54e-08 | 3 |
receptor cell | 6.71e-07 | 6 |
sensory epithelial cell | 6.71e-07 | 6 |
olfactory epithelial cell | 6.71e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
thoracic segment blood vessel | 1.68e-08 | 5 |
subclavian artery | 1.68e-08 | 5 |
artery | 2.78e-07 | 42 |
arterial blood vessel | 2.78e-07 | 42 |
arterial system | 2.78e-07 | 42 |
systemic artery | 4.46e-07 | 33 |
systemic arterial system | 4.46e-07 | 33 |
protuberance | 5.26e-07 | 6 |
pharyngeal arch | 5.26e-07 | 6 |
embryonic head | 5.26e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.12e-10 | 14 |
reproductive organ cancer | 5.00e-08 | 29 |
female reproductive organ cancer | 2.96e-07 | 27 |
benign neoplasm | 4.54e-07 | 4 |