FFCP PHASE1:Hg19::chr2:192252150..192252173,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:192252150..192252173,- to FFCP PHASE1:Hg19::chr2:192252150..192252173,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:192252150..192252173,- | |||
|description=CAGE_peak_at_chr2:192252150..192252173,- | |||
|id=chr2:192252150..192252173,- | |||
|ontology_enrichment_celltype=CL:0000220!3.72e-13!246;CL:0002321!5.58e-13!248;CL:0000066!6.29e-12!254;CL:0000055!7.53e-12!180;CL:0000057!8.19e-11!75;CL:0000548!1.06e-10!679;CL:0000004!1.06e-10!679;CL:0000255!1.06e-10!679;CL:0000012!3.13e-10!682;CL:0002620!5.47e-09!23;CL:0002076!1.85e-07!43;CL:0000221!3.14e-07!71;CL:0000223!3.63e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002076;7.36e-09;42!CL:0002251;1.04e-08;20!CL:0002620;2.74e-08;23!CL:0000135;5.89e-07;3!CL:0000388;5.89e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.05e-10,42;CL:0000057,1.20e-09,76;CL:0000223,3.72e-09,58;CL:0002251,7.68e-09,20;CL:0002620,1.34e-08,23;CL:0000135,4.29e-07,3;CL:0000388,4.29e-07,3;CL:0002321,5.23e-07,250;CL:0002334,9.98e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.17e-07!143;DOID:305!1.51e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.68e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.07e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0003102!4.61e-15!95;UBERON:0002199!4.56e-11!45;UBERON:0002416!4.56e-11!45;UBERON:0002097!2.25e-10!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0003729;8.26e-10;13!UBERON:0000344;1.62e-08;20!UBERON:0003343;4.81e-08;4!UBERON:0004785;4.81e-08;4!UBERON:0007846;5.89e-07;3!UBERON:0000043;5.89e-07;3!UBERON:0007845;5.89e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,4.89e-13,99;UBERON:0003729,4.84e-10,13;UBERON:0000344,7.48e-09,20;UBERON:0003343,3.27e-08,4;UBERON:0004785,3.27e-08,4;UBERON:0002097,1.97e-07,41;UBERON:0002199,3.27e-07,46;UBERON:0002416,3.27e-07,46;UBERON:0007846,4.29e-07,3;UBERON:0000043,4.29e-07,3;UBERON:0007845,4.29e-07,3 | |||
|phase1_expression=0.54503513781167,0,0.563817616383885,2.00146596706261,0.893922188854576,1.74467704820074,0,0.631719873426831,0.522371256399677,0.491467873003018,0,0,0,0.74259811776028,0,2.6893005858071,1.80808358407193,0,0.487932798790507,0,0,0.626909442956176,0.85870796139317,0.684372125364421,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.639312809217652,2.53007406669196,0,2.75208386025565,0,0,0.661743720148475,0.221729397462564,1.22968699970376,0.196468613246569,1.09288586487763,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,1.95249646038536,1.47065232138347,0,0.17859945656816,0,0.225222960966644,0,0,0,0,0,0,4.96971951695318,1.01304409331664,1.32409180813219,0,0.709336764396714,0.560677600142307,0,0.98667019366864,0,0.404132016209064,0.163461903113459,0,0,0,1.24864030732128,0,1.79338416662161,0.704606991862589,0.323745888736263,0.98315564691574,0,1.35117749042945,0.103325781175765,0,0.989067717114227,0,0,1.17835279767846,0.250237039743928,0,0,0.612975591598039,0.150238058906597,0.907457465280168,1.61450672119976,1.70845911054854,2.54318281391474,3.00091096084402,0.92747276314595,1.54584324027377,0.37223371266318,1.5189869901714,0.292311015483596,1.7670364197088,1.84099797284599,0.484938170456436,2.4850671476163,1.10827308050404,0.847802961552438,1.93260853163297,3.27295344709002,1.14721838155602,0,0.132529768321485,0.69716365721711,0.207322110030741,0.756962552626885,0,0,1.92972281457866,0,0.928735856063958,2.16563844500876,0.236613600079688,0.674338760312407,0,0.441175890929576,0.435758888184812,0.237270619111097,0.269662616320329,0.588664395376038,0.769494313892781,0,0,0,0,2.53510069643662,0.982827216677626,0,0,0.245976877086227,0.857839051492628,2.52425656439839,0,2.6137532827024,1.574003567695,0,1.03993478527958,2.88662684050547,0.927443239800615,0,0.721832238805369,0.462985512576611,2.09279567458058,0,0,0,0,0,0,0.671928512795438,0.992425680696705,8.41850113406774,3.48760726216754,0,0,0,0,0,0,0.507983154337352,0,0,0,0.411309970813294,0.600686115687835,0,0.112131084345361,0,0.51336800074665,1.42198887333556,0,3.381211010224,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0.977208552881205,0.710783897485092,0,0.301439377059586,0,0.499864955910285,0,0,0,1.67737398844108,1.14861935834114,0,1.15825045334063,0.205476322550383,0.179060963239896,0,0,0,0,0,2.60279707715243,0,0.167516265334349,0.637938751653163,0,0,0,0.12269149171914,0,0.271265023699736,4.99130067673937,7.49401752948079,3.31175071571263,1.17141414992713,0,0,0,1.32845119707087,0,1.12948698808508,0,0.343143423810856,0,0,0,0.606255142892519,0,0,0.744323423456331,1.84154367945675,1.40330047216537,0.896974044789907,0,1.93024705372329,0,0.462629081407967,2.30830242907065,2.46381468041427,1.55776328755086,2.44041794765914,0.483437798366489,3.20810352485256,1.65745780084613,0.114814448164607,0.910455840033585,0,0,0.231046011313244,0,0,0.316654886678627,0,0.170093705276516,0.431831832204279,0,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0.515205058238611,0.457847324091717,0.41254749960294,0,0.650060246036521,1.6068392984416,2.22342652071881,0.770243085573222,0.767518373630648,1.10269257987624,0.859361958946189,0.870100163485371,0.596586391912706,1.33548053470106,3.30569830721956,3.2672311452068,0.765676274967505,1.8208400553999,0,0.94443704049192,0,0.308033580176089,0,0,0.18532421910392,0,0.744316738719335,0.316379424718726,1.14378116354295,0,0,0,0,0.899362287916574,0.823611089208164,0.942499218765491,0,0,0,0,1.21856744815642,0,0.545999645631943,1.27264888758341,0,0,0,0,0,1.31178950409327,0,0,0.281695602532241,0.717056761020258,0.687743287091848,0,0.709522128141196,3.37772216476263,2.96365403663912,0,0,0.192444225451024,0,1.08890984861323,0.376575203107117,0,0,0,0.918893600827838,0,0,0,0,0,0,0,0,0,0,2.69544237579135,0,0.28853842595289,0.142283686696828,0.478278818186467,0,0,0,0,0,0,0,0,0,0.321176150207399,0,0,0,0,0,0,0,0,0,0,0,0,1.68426486367398,0,0,0,0.284136146806413,0,0,0,0,0,1.33570446027487,0,0,0.19924798825107,0,0.251932747854276,0.511343412510774,0,0.933118762985422,0.718946809178615,0.358042349351218,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,1.137934482855,1.01701460117107,0,0.689486746482929,0.291604613383254,0.173624994933292,0,0,0,0,0,0,0.544692317594951,1.67308493134324,0.153900517007594,1.13942055847001,0,0.269272933229316,0,0,0.732780747214898,0,0,0.156980256395025,0,0,0,0,0,0,0.421996129056054,0.163232808159148,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414752765588989,0,0,0,0,0.569219092059585,0,0,0.587954384486266,1.91530254476886,0,0,0,0.0730893170861856,0,0.0969890164884194,0,0.451961481561065,0.685209623233754,0.397429223405979,0,0,0.480952921509202,0,0.999048047910651,0.144090417154106,0,0,0.432164393964449,0.248505071130865,0,0,0,0,0,0,0,0,0.859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| 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| ||
|short_description=p@chr2:192252150..192252173,- | |||
}} | }} |
Latest revision as of 04:29, 29 July 2015
Short description: | p@chr2:192252150..192252173, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:192252150..192252173, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.05e-10 | 42 |
fibroblast | 1.20e-09 | 76 |
endodermal cell | 3.72e-09 | 58 |
epithelial cell of alimentary canal | 7.68e-09 | 20 |
skin fibroblast | 1.34e-08 | 23 |
fibrocyte | 4.29e-07 | 3 |
tendon cell | 4.29e-07 | 3 |
embryonic cell | 5.23e-07 | 250 |
preadipocyte | 9.98e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
surface structure | 4.89e-13 | 99 |
mouth mucosa | 4.84e-10 | 13 |
mucosa | 7.48e-09 | 20 |
mucosa of oral region | 3.27e-08 | 4 |
respiratory system mucosa | 3.27e-08 | 4 |
skin of body | 1.97e-07 | 41 |
integument | 3.27e-07 | 46 |
integumental system | 3.27e-07 | 46 |
dense regular connective tissue | 4.29e-07 | 3 |
tendon | 4.29e-07 | 3 |
regular connective tissue | 4.29e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.07e-07 | 14 |