FFCP PHASE1:Hg19::chr8:128218609..128218622,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:128218609..128218622,- | |||
|coexpression_cluster_id=C170 | |coexpression_cluster_id=C170 | ||
|description=CAGE_peak_at_chr8:128218609..128218622,- | |description=CAGE_peak_at_chr8:128218609..128218622,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000066!7.89e-26!254;CL:0000223!1.36e-21!59;CL:0002076!5.57e-11!43;CL:0002150!1.64e-10!3;CL:0000861!1.64e-10!3;CL:0000181!2.03e-08!12;CL:0000417!2.03e-08!12;CL:0000668!2.03e-08!12;CL:0000414!2.03e-08!12;CL:0000412!2.03e-08!12;CL:0000182!2.03e-08!12;CL:0002202!1.73e-07!9;CL:0002632!1.73e-07!9;CL:0000083!1.82e-07!4;CL:0000063!2.55e-07!578;CL:0002368!5.38e-07!13 | |ontology_enrichment_celltype=CL:0000066!7.89e-26!254;CL:0000223!1.36e-21!59;CL:0002076!5.57e-11!43;CL:0002150!1.64e-10!3;CL:0000861!1.64e-10!3;CL:0000181!2.03e-08!12;CL:0000417!2.03e-08!12;CL:0000668!2.03e-08!12;CL:0000414!2.03e-08!12;CL:0000412!2.03e-08!12;CL:0000182!2.03e-08!12;CL:0002202!1.73e-07!9;CL:0002632!1.73e-07!9;CL:0000083!1.82e-07!4;CL:0000063!2.55e-07!578;CL:0002368!5.38e-07!13 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.93e-10,253 | |||
|ontology_enrichment_development_v019=UBERON:0009497;3.57e-08;13!UBERON:0008814;6.99e-07;2!UBERON:0010056;6.99e-07;2 | |ontology_enrichment_development_v019=UBERON:0009497;3.57e-08;13!UBERON:0008814;6.99e-07;2!UBERON:0010056;6.99e-07;2 | ||
|ontology_enrichment_disease=DOID:305!1.94e-38!106;DOID:0050687!1.52e-25!143;DOID:162!1.09e-13!235;DOID:14566!3.60e-13!239;DOID:299!6.75e-12!25;DOID:1793!1.82e-07!4;DOID:4468!2.62e-07!2;DOID:4074!3.23e-07!2;DOID:4905!3.23e-07!2;DOID:3498!3.23e-07!2;DOID:1749!3.75e-07!14;DOID:4929!6.37e-07!2 | |ontology_enrichment_disease=DOID:305!1.94e-38!106;DOID:0050687!1.52e-25!143;DOID:162!1.09e-13!235;DOID:14566!3.60e-13!239;DOID:299!6.75e-12!25;DOID:1793!1.82e-07!4;DOID:4468!2.62e-07!2;DOID:4074!3.23e-07!2;DOID:4905!3.23e-07!2;DOID:3498!3.23e-07!2;DOID:1749!3.75e-07!14;DOID:4929!6.37e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:4468;1.07e-22;2!DOID:3111;3.08e-12;1!DOID:3603;3.08e-12;1!DOID:305;6.56e-12;106!DOID:299;8.06e-11;25!DOID:0050687;7.81e-08;143!DOID:1749;1.03e-07;14!DOID:4074;6.24e-07;2!DOID:4905;6.24e-07;2!DOID:3498;6.24e-07;2!DOID:3493;9.53e-07;2 | |ontology_enrichment_disease_v019=DOID:4468;1.07e-22;2!DOID:3111;3.08e-12;1!DOID:3603;3.08e-12;1!DOID:305;6.56e-12;106!DOID:299;8.06e-11;25!DOID:0050687;7.81e-08;143!DOID:1749;1.03e-07;14!DOID:4074;6.24e-07;2!DOID:4905;6.24e-07;2!DOID:3498;6.24e-07;2!DOID:3493;9.53e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:305,5.69e-28,106;DOID:4468,6.12e-23,2;DOID:0050687,3.42e-20,143;DOID:162,5.22e-13,235;DOID:14566,1.08e-12,239;DOID:3111,2.46e-12,1;DOID:3603,2.46e-12,1;DOID:299,7.57e-11,25;DOID:1749,1.06e-07,14;DOID:4074,6.42e-07,2;DOID:4905,6.42e-07,2;DOID:3498,6.42e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001041!4.43e-28!98;UBERON:0000077!5.49e-26!130;UBERON:0001737!1.26e-24!9;UBERON:0004921!1.26e-24!129;UBERON:0004185!1.26e-24!129;UBERON:0001007!8.34e-24!155;UBERON:0001555!8.34e-24!155;UBERON:0007026!8.34e-24!155;UBERON:0004119!3.98e-22!169;UBERON:0000925!3.98e-22!169;UBERON:0006595!3.98e-22!169;UBERON:0000072!4.43e-17!46;UBERON:0008947!6.02e-17!38;UBERON:0003258!6.02e-17!38;UBERON:0001557!3.72e-16!19;UBERON:0000065!7.69e-16!53;UBERON:0007499!5.18e-14!25;UBERON:0009497!5.59e-14!25;UBERON:0000015!5.59e-14!25;UBERON:0002423!5.59e-14!25;UBERON:0006235!5.59e-14!25;UBERON:0004161!5.59e-14!25;UBERON:0008835!1.06e-13!22;UBERON:0003894!1.06e-13!22;UBERON:0009856!2.30e-13!26;UBERON:0001048!2.46e-13!168;UBERON:0009854!5.37e-13!23;UBERON:0000466!5.54e-13!126;UBERON:0001004!6.71e-13!72;UBERON:0003104!1.06e-11!238;UBERON:0009142!1.06e-11!238;UBERON:0005911!1.17e-08!82;UBERON:0005177!1.18e-08!107;UBERON:0002107!1.93e-08!19;UBERON:0006925!1.93e-08!19;UBERON:0008836!1.93e-08!19;UBERON:0000063!2.19e-08!97;UBERON:0003929!2.52e-08!54;UBERON:0000344!3.65e-08!12;UBERON:0002394!2.73e-07!4;UBERON:0003928!2.73e-07!4;UBERON:0005057!3.28e-07!26;UBERON:0002294!8.76e-07!7;UBERON:0001173!8.76e-07!7;UBERON:0004912!8.76e-07!7;UBERON:0000481!8.89e-07!347 | |ontology_enrichment_uberon=UBERON:0001041!4.43e-28!98;UBERON:0000077!5.49e-26!130;UBERON:0001737!1.26e-24!9;UBERON:0004921!1.26e-24!129;UBERON:0004185!1.26e-24!129;UBERON:0001007!8.34e-24!155;UBERON:0001555!8.34e-24!155;UBERON:0007026!8.34e-24!155;UBERON:0004119!3.98e-22!169;UBERON:0000925!3.98e-22!169;UBERON:0006595!3.98e-22!169;UBERON:0000072!4.43e-17!46;UBERON:0008947!6.02e-17!38;UBERON:0003258!6.02e-17!38;UBERON:0001557!3.72e-16!19;UBERON:0000065!7.69e-16!53;UBERON:0007499!5.18e-14!25;UBERON:0009497!5.59e-14!25;UBERON:0000015!5.59e-14!25;UBERON:0002423!5.59e-14!25;UBERON:0006235!5.59e-14!25;UBERON:0004161!5.59e-14!25;UBERON:0008835!1.06e-13!22;UBERON:0003894!1.06e-13!22;UBERON:0009856!2.30e-13!26;UBERON:0001048!2.46e-13!168;UBERON:0009854!5.37e-13!23;UBERON:0000466!5.54e-13!126;UBERON:0001004!6.71e-13!72;UBERON:0003104!1.06e-11!238;UBERON:0009142!1.06e-11!238;UBERON:0005911!1.17e-08!82;UBERON:0005177!1.18e-08!107;UBERON:0002107!1.93e-08!19;UBERON:0006925!1.93e-08!19;UBERON:0008836!1.93e-08!19;UBERON:0000063!2.19e-08!97;UBERON:0003929!2.52e-08!54;UBERON:0000344!3.65e-08!12;UBERON:0002394!2.73e-07!4;UBERON:0003928!2.73e-07!4;UBERON:0005057!3.28e-07!26;UBERON:0002294!8.76e-07!7;UBERON:0001173!8.76e-07!7;UBERON:0004912!8.76e-07!7;UBERON:0000481!8.89e-07!347 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.0821005894499457,0.236132343941038,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.505754070234305,0.482022059766964,0.772057809126758,0.653638332277218,0.71181185733329,0.674156540800822,0.392442930250692,1.92373578473195,0,0,0,0,0,0,0.590789906681404,0,0.860919069801795,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,6.3337622438398,0,0,0,0,0.123084805461069,0,1.70749867179921,0.537063524026827,0,0,0,0,0,0,0,0,0,0,0.455173793141999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89898258075224,1.95879369790977,0.706765357169704,0,0,0,0,0,0,0,0,0,0,0,0.782658475728359,3.64170569301139,0,0,0,0,0,0,0,0,0,0,1.13843818411917,0,0,0,0,0,0,18.2869466136371,12.3520945875654,14.2880895272584,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,7.92301388934823,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32991899054908,0.86661500537946,0.988990300573997,1.07845670166696,0.393709926058995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90180911022764,0,0,0,0,0,0.279759015438889,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366857197043358,2.65709032145778,0,0,0,0,0,0,0,0,0.739280431085226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64353812307926,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0.447421727191169,1.66855397145913,0.121917924982269,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,1.41157948686277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0.143444410785353,0,0,0,0,0.718601616852695,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.0821005894499457,0.236132343941038,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.505754070234305,0.482022059766964,0.772057809126758,0.653638332277218,0.71181185733329,0.674156540800822,0.392442930250692,1.92373578473195,0,0,0,0,0,0,0.590789906681404,0,0.860919069801795,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,6.3337622438398,0,0,0,0,0.123084805461069,0,1.70749867179921,0.537063524026827,0,0,0,0,0,0,0,0,0,0,0.455173793141999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89898258075224,1.95879369790977,0.706765357169704,0,0,0,0,0,0,0,0,0,0,0,0.782658475728359,3.64170569301139,0,0,0,0,0,0,0,0,0,0,1.13843818411917,0,0,0,0,0,0,18.2869466136371,12.3520945875654,14.2880895272584,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,7.92301388934823,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32991899054908,0.86661500537946,0.988990300573997,1.07845670166696,0.393709926058995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90180911022764,0,0,0,0,0,0.279759015438889,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366857197043358,2.65709032145778,0,0,0,0,0,0,0,0,0.739280431085226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64353812307926,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0.447421727191169,1.66855397145913,0.121917924982269,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,1.41157948686277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0.143444410785353,0,0,0,0,0.718601616852695,0,0,0,0,0,0 | ||
|short_description=p@chr8:128218609..128218622,- | |short_description=p@chr8:128218609..128218622,- | ||
}} | }} |
Latest revision as of 14:51, 31 July 2015
Short description: | p@chr8:128218609..128218622, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:128218609..128218622, - |
Coexpression cluster: | C170_epitheloid_cervical_Hep2_keratoacanthoma_adult_neuroblastoma_signet |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.93e-10 | 253 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.69e-28 | 106 |
clear cell adenocarcinoma | 6.12e-23 | 2 |
cell type cancer | 3.42e-20 | 143 |
cancer | 5.22e-13 | 235 |
disease of cellular proliferation | 1.08e-12 | 239 |
cystadenocarcinoma | 2.46e-12 | 1 |
mucinous cystadenocarcinoma | 2.46e-12 | 1 |
adenocarcinoma | 7.57e-11 | 25 |
squamous cell carcinoma | 1.06e-07 | 14 |
pancreas adenocarcinoma | 6.42e-07 | 2 |
pancreatic carcinoma | 6.42e-07 | 2 |
pancreatic ductal adenocarcinoma | 6.42e-07 | 2 |