FFCP PHASE1:Mm9::chr17:34164961..34164968,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:34164961..34164968,-
|short_description=p3@H2-Ke6
|description=CAGE_peak_3_at_H2-Ke6_5end
|association_with_transcript=14bp_to_ENSMUST00000173894_5end
|E...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=14979 | |EntrezGene=14979 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=14bp_to_ENSMUST00000173894_5end | |||
|cluster_id=chr17:34164961..34164968,- | |||
|description=CAGE_peak_3_at_H2-Ke6_5end | |||
|id=chr17:34164961..34164968,- | |||
|ontology_enrichment_celltype=CL:0000221!7.69e-08!44;CL:0000133!7.69e-08!44;CL:0002319!1.16e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,4.62e-16,3;CL:0002319,1.97e-10,43;CL:0000221,3.67e-10,44;CL:0000133,3.67e-10,44;CL:0000117,4.95e-10,23;CL:0000337,4.95e-10,23;CL:0002321,3.56e-07,70;CL:0000540,9.08e-07,33;CL:0000047,9.08e-07,33;CL:0000031,9.08e-07,33;CL:0000404,9.08e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,7.55e-10,5;UBERON:0002435,7.55e-10,5;UBERON:0000204,7.55e-10,5;UBERON:0010082,7.55e-10,5 | |||
|phase1_expression=0.480446541314382,0.348975407639361,0.454999239389536,0.30246421130683,0,0,0,0,0.563154888606667,2.10658073689794,0,0.0797721589953364,0,0.34968160967599,0,0,0,0.157731082679119,0.137114433605739,0,0.17008658030214,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0.221730510655305,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0.304130793658544,0.183546752161682,0,3.05235218932625,0.439372365468944,0.58328969722285,0.839918529752175,2.87505128729943,0.167782606057736,0,0,0.257259436035947,0,0,2.63011399117477,0.528990979272033,0,0.677689064138264,0,0,0,0,0.898800331555214,1.53687322128622,0.725827286159344,1.08004750665353,1.47227472945967,0,0.662605622854841,0.979926393719632,0.958454710182364,0.919218786610021,0,0.127687338085188,0,2.50583946687368,2.28719109006024,1.56274011167028,0,0,0.15279824777681,0.883885756421003,0.284743361598206,1.4911955666024,0.227178579999552,0,0.289864488701678,0,0.679971333707751,1.61910957491345,0.649776417447669,0.896053774194671,0.140444420131752,0,0.259786004602869,0.35333957451034,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0.445326417194474,0.520455980298408,0.608930956624282,0.691846491768175,0.753613202763113,0.587943535678524,0.251333182659351,0,0.144599356919912,0.884610551949874,0,0,0.484875253135222,0,0,0.209446706813455,0.255457055208591,0.239630249011841,0.599902730993408,0.127070227073065,0,0,0.628271760564322,0.347648640384553,0,0.41557608911912,0,0.203678727700633,0.124406970610093,0,0,0.520481771850815,0.459804208866946,0.360124259610698,0.60281927134286,0.680364991513279,0.768682321709099,0.468508622798644,0,0.431135985865684,0,0,0,0,0,0.205782136407943,0.59710280045548,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0.16455984991348,0,0,0,0,0,0.210289948564127,0.617427674275707,0,0,0.213288250535234,0,0,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0,0.198956472041151,0,0,0.216138049874694,0,0.189667900953082,0.228497025219458,0,0.203651327845314,0,0.280543279561274,0,0,0.31399745568275,0.123397163921801,0.889357881261447,0,0,0,0.608580364165509,0,0,0,0.486405680325106,0,0,0,0,0.505157755894224,0,1.4473305640901,0.184753190166605,0,0.162964976442026,0.509235257325564,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0.315508219416257,0,0.430846795465598,0,0,0.283076530788832,0,0.584511715822624,0.395287777946524,0,0.283880170416537,0.178065603667255,0,0.164970122972535,0,0,0.302323556964751,0.188605079755898,1.47650946440386,0.307435147943927,0.516856586336442,0.727067458955011,0,0.632073515871632,1.05418608574999,1.03135543248187,0,0.900305470156551,0.905510786479282,0.214337035031592,0.354680467284547,0.178368817602071,0,0,0.23467170806371,0.21183207086382,0.441056796109924,0,0,0,0.119372344003136,0,0.291480836629851,0,0.170870880797853,0,0,0.188368457004691,0,0,0,0,0.138199973804424,0,0,0.406638934253697,0,0,0,0,0.0826534557253359,0,0,0,0.56369293868419,0.299033092087958,0.66183396182839,0.194451188344048,0.129159823477731,0.168956125490778,0,0,0.524296722128554,0.724752362478018,0.288030006257865,0,0,0.924398614483445,0.25984164595559,0.358053391334963,0,0.120195449519969,0,0.201932899896295,0.0762068066549998,0.100826185136841,0,0,0,0,0,0.358855426437903,0.335769232728157,0,0,0.183151624267265,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,1.14166082342594,0.798049746802062,0.512200817262403,0.243106717068294,0.209613162627982,0.367687016900028,0.222246727801615,0,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0.476293691283074,0,0.192909220463705,0.412085900803307,0.147198920134397,1.02860775715625,0.177475806159338,0.238436189947321,0,0.188218760830661,0.169229215783353,0.365855945745545,0.263069711437843,0,0,0.355905054372522,0.394017929502254,0,0,0.192906610981141,0,0.233931608445408,0,0,0,0 | |phase1_expression=0.480446541314382,0.348975407639361,0.454999239389536,0.30246421130683,0,0,0,0,0.563154888606667,2.10658073689794,0,0.0797721589953364,0,0.34968160967599,0,0,0,0.157731082679119,0.137114433605739,0,0.17008658030214,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0.221730510655305,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0.304130793658544,0.183546752161682,0,3.05235218932625,0.439372365468944,0.58328969722285,0.839918529752175,2.87505128729943,0.167782606057736,0,0,0.257259436035947,0,0,2.63011399117477,0.528990979272033,0,0.677689064138264,0,0,0,0,0.898800331555214,1.53687322128622,0.725827286159344,1.08004750665353,1.47227472945967,0,0.662605622854841,0.979926393719632,0.958454710182364,0.919218786610021,0,0.127687338085188,0,2.50583946687368,2.28719109006024,1.56274011167028,0,0,0.15279824777681,0.883885756421003,0.284743361598206,1.4911955666024,0.227178579999552,0,0.289864488701678,0,0.679971333707751,1.61910957491345,0.649776417447669,0.896053774194671,0.140444420131752,0,0.259786004602869,0.35333957451034,0.281686839553361,0,0,0,0,0,0,0.22836775943812,0,0.445326417194474,0.520455980298408,0.608930956624282,0.691846491768175,0.753613202763113,0.587943535678524,0.251333182659351,0,0.144599356919912,0.884610551949874,0,0,0.484875253135222,0,0,0.209446706813455,0.255457055208591,0.239630249011841,0.599902730993408,0.127070227073065,0,0,0.628271760564322,0.347648640384553,0,0.41557608911912,0,0.203678727700633,0.124406970610093,0,0,0.520481771850815,0.459804208866946,0.360124259610698,0.60281927134286,0.680364991513279,0.768682321709099,0.468508622798644,0,0.431135985865684,0,0,0,0,0,0.205782136407943,0.59710280045548,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0.16455984991348,0,0,0,0,0,0.210289948564127,0.617427674275707,0,0,0.213288250535234,0,0,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0,0.198956472041151,0,0,0.216138049874694,0,0.189667900953082,0.228497025219458,0,0.203651327845314,0,0.280543279561274,0,0,0.31399745568275,0.123397163921801,0.889357881261447,0,0,0,0.608580364165509,0,0,0,0.486405680325106,0,0,0,0,0.505157755894224,0,1.4473305640901,0.184753190166605,0,0.162964976442026,0.509235257325564,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0.315508219416257,0,0.430846795465598,0,0,0.283076530788832,0,0.584511715822624,0.395287777946524,0,0.283880170416537,0.178065603667255,0,0.164970122972535,0,0,0.302323556964751,0.188605079755898,1.47650946440386,0.307435147943927,0.516856586336442,0.727067458955011,0,0.632073515871632,1.05418608574999,1.03135543248187,0,0.900305470156551,0.905510786479282,0.214337035031592,0.354680467284547,0.178368817602071,0,0,0.23467170806371,0.21183207086382,0.441056796109924,0,0,0,0.119372344003136,0,0.291480836629851,0,0.170870880797853,0,0,0.188368457004691,0,0,0,0,0.138199973804424,0,0,0.406638934253697,0,0,0,0,0.0826534557253359,0,0,0,0.56369293868419,0.299033092087958,0.66183396182839,0.194451188344048,0.129159823477731,0.168956125490778,0,0,0.524296722128554,0.724752362478018,0.288030006257865,0,0,0.924398614483445,0.25984164595559,0.358053391334963,0,0.120195449519969,0,0.201932899896295,0.0762068066549998,0.100826185136841,0,0,0,0,0,0.358855426437903,0.335769232728157,0,0,0.183151624267265,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,1.14166082342594,0.798049746802062,0.512200817262403,0.243106717068294,0.209613162627982,0.367687016900028,0.222246727801615,0,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.0574354689556133,0.476293691283074,0,0.192909220463705,0.412085900803307,0.147198920134397,1.02860775715625,0.177475806159338,0.238436189947321,0,0.188218760830661,0.169229215783353,0.365855945745545,0.263069711437843,0,0,0.355905054372522,0.394017929502254,0,0,0.192906610981141,0,0.233931608445408,0,0,0,0 | ||
|short_description=p3@H2-Ke6 | |||
}} | }} |
Latest revision as of 07:22, 26 September 2015
Short description: | p3@H2-Ke6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_H2-Ke6_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_ENSMUST00000173894_5end |
EntrezGene: | H2-Ke6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 4.62e-16 | 3 |
neural cell | 1.97e-10 | 43 |
ectodermal cell | 3.67e-10 | 44 |
neurectodermal cell | 3.67e-10 | 44 |
CNS neuron (sensu Vertebrata) | 4.95e-10 | 23 |
neuroblast (sensu Vertebrata) | 4.95e-10 | 23 |
embryonic cell | 3.56e-07 | 70 |
neuron | 9.08e-07 | 33 |
neuronal stem cell | 9.08e-07 | 33 |
neuroblast | 9.08e-07 | 33 |
electrically signaling cell | 9.08e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 7.55e-10 | 5 |
striatum | 7.55e-10 | 5 |
ventral part of telencephalon | 7.55e-10 | 5 |
future corpus striatum | 7.55e-10 | 5 |