FFCP PHASE1:Mm9::chr6:78321216..78321221,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=448|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:78321216..78321221,+|id=chr6:78321216..78321221,+|ontology_enrichment_celltype=CL:0000239!5.63e-26!6;CL:0000677!5.63e-26!6;CL:0000212!5.63e-26!6;CL:0000584!5.63e-26!6;CL:0000075!3.23e-22!7;CL:0002563!3.37e-17!9;CL:0002251!3.37e-17!9;CL:0000473!1.44e-14!3;CL:0000627!1.44e-14!3;CL:0000682!1.44e-14!3;CL:0000066!2.80e-13!25;CL:0002076!3.79e-10!15;CL:0000223!1.71e-07!20|ontology_enrichment_celltype_v019_2=CL:0000682,1.96e-24,3;CL:0000239,2.27e-12,6;CL:0000677,2.27e-12,6;CL:0000584,2.27e-12,6;CL:0000066,3.25e-11,25;CL:0000473,7.34e-11,7;CL:0000075,1.08e-10,7;CL:0002563,1.90e-08,9;CL:0002251,1.90e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!2.45e-34!15;UBERON:0001242!3.86e-33!13;UBERON:0000060!3.86e-33!13;UBERON:0001262!3.86e-33!13;UBERON:0004786!3.86e-33!13;UBERON:0000160!4.48e-21!43;UBERON:0004923!7.51e-21!24;UBERON:0003350!3.37e-17!9;UBERON:0004808!3.37e-17!9;UBERON:0001277!3.37e-17!9;UBERON:0000331!4.07e-15!3;UBERON:0002116!4.07e-15!3;UBERON:0001204!4.07e-15!3;UBERON:0001168!4.07e-15!3;UBERON:0005409!1.04e-14!59;UBERON:0000485!5.35e-14!11|ontology_enrichment_uberon_v019_2=UBERON:0000331,2.12e-25,3;UBERON:0002116,2.12e-25,3;UBERON:0001204,2.12e-25,3;UBERON:0001168,2.12e-25,3;UBERON:0001242,4.25e-22,13;UBERON:0001262,4.25e-22,13;UBERON:0004786,4.25e-22,13;UBERON:0002108,3.10e-19,4;UBERON:0000344,3.82e-19,15;UBERON:0000160,4.40e-16,31;UBERON:0004923,6.38e-12,24;UBERON:0005409,1.94e-10,47;UBERON:0003350,1.90e-08,9;UBERON:0004808,1.90e-08,9;UBERON:0001277,1.90e-08,9;UBERON:0000485,5.21e-07,11|phase1_expression=0,1.04692622291808,3.18499467572675,0.30246421130683,1.00179145989269,0.33575854382378,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0,3.44539178469012,1.7230479846363,1.50829862880122,3.80046838912748,3.02436155711917,3.76941868114018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,2.64450566663544,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0.898819408654221,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr6:78321216..78321221,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=448 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:78321216..78321221,+ | |||
|id=chr6:78321216..78321221,+ | |||
|ontology_enrichment_celltype=CL:0000239!5.63e-26!6;CL:0000677!5.63e-26!6;CL:0000212!5.63e-26!6;CL:0000584!5.63e-26!6;CL:0000075!3.23e-22!7;CL:0002563!3.37e-17!9;CL:0002251!3.37e-17!9;CL:0000473!1.44e-14!3;CL:0000627!1.44e-14!3;CL:0000682!1.44e-14!3;CL:0000066!2.80e-13!25;CL:0002076!3.79e-10!15;CL:0000223!1.71e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.96e-24,3;CL:0000239,2.27e-12,6;CL:0000677,2.27e-12,6;CL:0000584,2.27e-12,6;CL:0000066,3.25e-11,25;CL:0000473,7.34e-11,7;CL:0000075,1.08e-10,7;CL:0002563,1.90e-08,9;CL:0002251,1.90e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.45e-34!15;UBERON:0001242!3.86e-33!13;UBERON:0000060!3.86e-33!13;UBERON:0001262!3.86e-33!13;UBERON:0004786!3.86e-33!13;UBERON:0000160!4.48e-21!43;UBERON:0004923!7.51e-21!24;UBERON:0003350!3.37e-17!9;UBERON:0004808!3.37e-17!9;UBERON:0001277!3.37e-17!9;UBERON:0000331!4.07e-15!3;UBERON:0002116!4.07e-15!3;UBERON:0001204!4.07e-15!3;UBERON:0001168!4.07e-15!3;UBERON:0005409!1.04e-14!59;UBERON:0000485!5.35e-14!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000331,2.12e-25,3;UBERON:0002116,2.12e-25,3;UBERON:0001204,2.12e-25,3;UBERON:0001168,2.12e-25,3;UBERON:0001242,4.25e-22,13;UBERON:0001262,4.25e-22,13;UBERON:0004786,4.25e-22,13;UBERON:0002108,3.10e-19,4;UBERON:0000344,3.82e-19,15;UBERON:0000160,4.40e-16,31;UBERON:0004923,6.38e-12,24;UBERON:0005409,1.94e-10,47;UBERON:0003350,1.90e-08,9;UBERON:0004808,1.90e-08,9;UBERON:0001277,1.90e-08,9;UBERON:0000485,5.21e-07,11 | |||
|phase1_expression=0,1.04692622291808,3.18499467572675,0.30246421130683,1.00179145989269,0.33575854382378,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0,3.44539178469012,1.7230479846363,1.50829862880122,3.80046838912748,3.02436155711917,3.76941868114018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,2.64450566663544,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0.898819408654221,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:78321216..78321221,+ | |||
}} |
Revision as of 10:39, 14 September 2013
Short description: | p@chr6:78321216..78321221, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:78321216..78321221, + |
Coexpression cluster: | MCL_coexpression_mm9:448 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.96e-24 | 3 |
brush border epithelial cell | 2.27e-12 | 6 |
gut absorptive cell | 2.27e-12 | 6 |
enterocyte | 2.27e-12 | 6 |
epithelial cell | 3.25e-11 | 25 |
defensive cell | 7.34e-11 | 7 |
columnar/cuboidal epithelial cell | 1.08e-10 | 7 |
intestinal epithelial cell | 1.90e-08 | 9 |
epithelial cell of alimentary canal | 1.90e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
ileal mucosa | 2.12e-25 | 3 |
ileum | 2.12e-25 | 3 |
mucosa of small intestine | 2.12e-25 | 3 |
wall of small intestine | 2.12e-25 | 3 |
intestinal mucosa | 4.25e-22 | 13 |
wall of intestine | 4.25e-22 | 13 |
gastrointestinal system mucosa | 4.25e-22 | 13 |
small intestine | 3.10e-19 | 4 |
mucosa | 3.82e-19 | 15 |
intestine | 4.40e-16 | 31 |
organ component layer | 6.38e-12 | 24 |
gastrointestinal system | 1.94e-10 | 47 |
epithelium of mucosa | 1.90e-08 | 9 |
gastrointestinal system epithelium | 1.90e-08 | 9 |
intestinal epithelium | 1.90e-08 | 9 |
simple columnar epithelium | 5.21e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.