FFCP PHASE1:Mm9::chr9:46045486..46045491,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:46045486..46045491,- | |||
|description=CAGE_peak_at_chr9:46045486..46045491,- | |description=CAGE_peak_at_chr9:46045486..46045491,- | ||
|id=chr9:46045486..46045491,- | |id=chr9:46045486..46045491,- | ||
|ontology_enrichment_celltype=CL:0002563!2.96e-29!9;CL:0002251!2.96e-29!9;CL:0000239!8.01e-26!6;CL:0000677!8.01e-26!6;CL:0000212!8.01e-26!6;CL:0000584!8.01e-26!6;CL:0000075!4.46e-22!7;CL:0000066!3.04e-19!25;CL:0002076!3.64e-17!15;CL:0000473!2.69e-14!3;CL:0000627!2.69e-14!3;CL:0000682!2.69e-14!3;CL:0000223!1.28e-12!20 | |ontology_enrichment_celltype=CL:0002563!2.96e-29!9;CL:0002251!2.96e-29!9;CL:0000239!8.01e-26!6;CL:0000677!8.01e-26!6;CL:0000212!8.01e-26!6;CL:0000584!8.01e-26!6;CL:0000075!4.46e-22!7;CL:0000066!3.04e-19!25;CL:0002076!3.64e-17!15;CL:0000473!2.69e-14!3;CL:0000627!2.69e-14!3;CL:0000682!2.69e-14!3;CL:0000223!1.28e-12!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.23e-37,6;CL:0000677,4.23e-37,6;CL:0000584,4.23e-37,6;CL:0000075,8.69e-32,7;CL:0002563,1.07e-24,9;CL:0002251,1.07e-24,9;CL:0000682,3.45e-20,3;CL:0000066,1.25e-19,25;CL:0002076,9.81e-15,15;CL:0000223,5.55e-11,20;CL:0000473,5.54e-09,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.60e-46!15;UBERON:0001242!1.79e-37!13;UBERON:0000060!1.79e-37!13;UBERON:0001262!1.79e-37!13;UBERON:0004786!1.79e-37!13;UBERON:0003350!2.96e-29!9;UBERON:0004808!2.96e-29!9;UBERON:0001277!2.96e-29!9;UBERON:0004923!5.09e-28!24;UBERON:0000485!9.17e-24!11;UBERON:0000160!2.15e-19!43;UBERON:0005409!1.85e-13!59;UBERON:0001962!2.71e-10!2;UBERON:0001961!2.71e-10!2;UBERON:0001744!2.71e-10!2;UBERON:0002465!3.99e-07!3;UBERON:0001007!9.27e-07!128;UBERON:0001555!9.27e-07!128;UBERON:0007026!9.27e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,9.61e-41,15;UBERON:0001242,1.01e-29,13;UBERON:0001262,1.01e-29,13;UBERON:0004786,1.01e-29,13;UBERON:0004923,3.96e-25,24;UBERON:0003350,1.07e-24,9;UBERON:0004808,1.07e-24,9;UBERON:0001277,1.07e-24,9;UBERON:0000485,3.57e-20,11;UBERON:0000160,2.99e-15,31;UBERON:0001962,2.49e-14,2;UBERON:0001961,2.49e-14,2;UBERON:0001744,2.49e-14,2;UBERON:0002465,7.42e-10,3;UBERON:0005409,9.58e-10,47;UBERON:0003199,4.65e-08,1 | |||
|phase1_expression=0,5.93258192986914,9.09998478779072,1.20985684522732,4.50806156951712,6.21153306073992,5.13947809310157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.239515058778,18.1233332043064,6.89078356938024,16.3689558540448,7.97243560937789,0,0.252030129759931,3.54768817048488,0,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,2.11560453330835,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,5.93258192986914,9.09998478779072,1.20985684522732,4.50806156951712,6.21153306073992,5.13947809310157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.239515058778,18.1233332043064,6.89078356938024,16.3689558540448,7.97243560937789,0,0.252030129759931,3.54768817048488,0,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,2.11560453330835,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr9:46045486..46045491,- | |short_description=p@chr9:46045486..46045491,- | ||
}} | }} |
Latest revision as of 05:33, 5 August 2015
Short description: | p@chr9:46045486..46045491, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:46045486..46045491, - |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.23e-37 | 6 |
gut absorptive cell | 4.23e-37 | 6 |
enterocyte | 4.23e-37 | 6 |
columnar/cuboidal epithelial cell | 8.69e-32 | 7 |
intestinal epithelial cell | 1.07e-24 | 9 |
epithelial cell of alimentary canal | 1.07e-24 | 9 |
M cell of gut | 3.45e-20 | 3 |
epithelial cell | 1.25e-19 | 25 |
endo-epithelial cell | 9.81e-15 | 15 |
endodermal cell | 5.55e-11 | 20 |
defensive cell | 5.54e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 9.61e-41 | 15 |
intestinal mucosa | 1.01e-29 | 13 |
wall of intestine | 1.01e-29 | 13 |
gastrointestinal system mucosa | 1.01e-29 | 13 |
organ component layer | 3.96e-25 | 24 |
epithelium of mucosa | 1.07e-24 | 9 |
gastrointestinal system epithelium | 1.07e-24 | 9 |
intestinal epithelium | 1.07e-24 | 9 |
simple columnar epithelium | 3.57e-20 | 11 |
intestine | 2.99e-15 | 31 |
gut-associated lymphoid tissue | 2.49e-14 | 2 |
mucosa-associated lymphoid tissue | 2.49e-14 | 2 |
lymphoid tissue | 2.49e-14 | 2 |
lymphoid system | 7.42e-10 | 3 |
gastrointestinal system | 9.58e-10 | 47 |
egg chamber | 4.65e-08 | 1 |