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Difference between revisions of "UBERON:0000480"

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{{UBERON
 
{{UBERON
|id=UBERON:0000480
+
|alt_id=UBERON:CARO_0000054-XAO_0003001-ZFA_0001512
|name=anatomical group
 
|namespace=
 
|def="Anatomical structure consisting of at least two non-overlapping organs, multi-tissue aggregates or portion of tissues or cells of different types that does not constitute an organism, organ, multi-tissue aggregate, or portion of tissue." [CARO:0000054, CARO:MAH]
 
|xref=AAO:0010008;;AEO:0000054;;BILA:0000054;;CARO:0000054;;EHDAA2:0003054;;HAO:0000054;;TAO:0001512;;TGMA:0001846;;XAO:0003001;;ZFA:0001512
 
|is_a=UBERON:0000061
 
|synonym=
 
 
|comment=
 
|comment=
|alt_id=UBERON:CARO_0000054-XAO_0003001-ZFA_0001512
 
|disjoint_from=
 
|union_of=
 
 
|created_by=
 
|created_by=
|obo_creation_date=
+
|def="Anatomical structure consisting of at least two non-overlapping organs, multi-tissue aggregates or portion of tissues or cells of different types that does not constitute an organism, organ, multi-tissue aggregate, or portion of tissue." [CARO:0000054, CARO:MAH]
|subset=upper_level
 
|adjacent_to=
 
 
|derives_from=
 
|derives_from=
 
|develops_from=
 
|develops_from=
 +
|disjoint_from=
 
|has_quality=
 
|has_quality=
 +
|id=UBERON:0000480
 +
|is_a=UBERON:0000061
 +
|is_obsolete=
 
|located_in=
 
|located_in=
|part_of=
+
|name=anatomical group
 +
|namespace=FANTOM
 +
|obo_creation_date=
 +
|part_of=UBERON:0000468
 +
|preceded_by=
 
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
 
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
+
|subset=upper_level
|preceded_by=
+
|synonym=
 +
|union_of=
 +
|xref=AAO:0010008;;AEO:0000054;;BILA:0000054;;CARO:0000054;;EHDAA2:0003054;;HAO:0000054;;TAO:0001512;;TGMA:0001846;;XAO:0003001;;ZFA:0001512
 
}}
 
}}

Latest revision as of 08:09, 12 September 2014

Name:anatomical group
Namespace:FANTOM
Definition:"Anatomical structure consisting of at least two non-overlapping organs, multi-tissue aggregates or portion of tissues or cells of different types that does not constitute an organism, organ, multi-tissue aggregate, or portion of tissue." [CARO:0000054, CARO:MAH]
Xrefs:
links:

AAO:0010008
AEO:0000054
BILA:0000054
CARO:0000054
EHDAA2:0003054
HAO:0000054
TAO:0001512
TGMA:0001846
XAO:0003001

ZFA:0001512
Alt_id: UBERON:CARO_0000054-XAO_0003001-ZFA_0001512
Subset: upper_level

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000061(anatomical structure)
part_of:UBERON:0000468(multi-cellular organism)



Children

is a:UBERON:0000467 (anatomical system),UBERON:0000477 (anatomical cluster),UBERON:0001015 (musculature),UBERON:0004716 (conceptus),UBERON:0010191 (aortic system),UBERON:0018254 (skeletal musculature)
disjoint from:UBERON:0000476 (acellular anatomical structure)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000480 (anatomical group), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


No analysis results