UBERON:0000477
From FANTOM5_SSTAR
Name: | anatomical cluster | ||
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Namespace: | FANTOM | ||
Definition: | "Anatomical group that has its parts adjacent to one another." [CARO:MAH] | ||
Xrefs: |
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Alt_id: | UBERON:CARO_0000041-FMA_49443-ZFA_0001478 | ||
Subset: |
disjointness_axiom_removed upper_level |
Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.
link to ontology dataset
data
Parents
is_a: | UBERON:0000480(anatomical group) |
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Children
is a: | UBERON:0000170 (pair of lungs),UBERON:0000349 (limbic system),UBERON:0001353 (anal region),UBERON:0001556 (lower urinary tract),UBERON:0001737 (larynx),UBERON:0001839 (bony labyrinth),UBERON:0001844 (cochlea),UBERON:0001846 (internal ear),UBERON:0002049 (vasculature),UBERON:0002275 (reticular formation),UBERON:0002303 (juxtaglomerular apparatus),UBERON:0002465 (lymphoid system),UBERON:0002680 (regional part of metencephalon),UBERON:0003112 (olfactory region),UBERON:0003672 (dentition),UBERON:0004088 (ocular region),UBERON:0004111 (anatomical conduit),UBERON:0004288 (skeleton),UBERON:0004770 (articular system),UBERON:0004905 (articulation),UBERON:0005162 (multi cell component structure),UBERON:0005352 (spermatic cord),UBERON:0006558 (lymphatic part of lymphoid system),UBERON:0008814 (pharyngeal arch system),UBERON:0009142 (entire embryonic mesenchyme),UBERON:0009664 (gut mesentery),UBERON:0009751 (cardiac mesenchyme),UBERON:0009899 (pole of cerebral hemisphere),UBERON:0010743 (meningeal cluster),UBERON:0011143 (upper urinary tract),UBERON:0011216 (organ system subdivision),UBERON:0011595 (jaw region),UBERON:0011932 (pilosebaceous unit),UBERON:0012361 (internal anal region),UBERON:0012469 (external anal region),UBERON:0015238 (pineal complex),UBERON:0015827 (brainstem reticular formation) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10011-101C2 (bladder, adult, pool1)
- 10012-101C3 (brain, adult, pool1)
- 10014-101C5 (colon, adult, pool1)
- 10015-101C6 (esophagus, adult, pool1)
- 10017-101C8 (kidney, adult, pool1)
- 10019-101D1 (lung, adult, pool1)
- 10024-101D6 (small intestine, adult, pool1)
- 10030-101E3 (retina, adult, pool1)
- 10031-101E4 (temporal lobe, adult, pool1)
- 10032-101E5 (postcentral gyrus, adult, pool1)
... further results Mouse (Mus musculus)
- 10011-101C2 (bladder, adult, pool1)
- 10012-101C3 (brain, adult, pool1)
- 10014-101C5 (colon, adult, pool1)
- 10015-101C6 (esophagus, adult, pool1)
- 10017-101C8 (kidney, adult, pool1)
- 10019-101D1 (lung, adult, pool1)
- 10024-101D6 (small intestine, adult, pool1)
- 10030-101E3 (retina, adult, pool1)
- 10031-101E4 (temporal lobe, adult, pool1)
- 10032-101E5 (postcentral gyrus, adult, pool1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000477 (anatomical cluster), sorted by p-values
Analyst: Hideya Kawaji
link to source dataset
human : data
mouse : data
No analysis results