Personal tools

MacroAPE 1083:CAGAGTTCTAG,motif792

From FANTOM5_SSTAR

Jump to: navigation, search

Full Name: CAGAGTTCTAG,motif792,CNhs10632,T:515.0(10.30%),B:4438.2(6.17%),P:1e-28

Motif matrix
POACGT
178.795259.5689.09587.55
2372.860.5155.665135.96
3141.62514.42260.5998.365
4290.97510.3111.755101.97
577.2585.49269.8682.4
6115.875132.8715.45250.805
766.95108.66524.72314.665
828.325453.71520.08512.875
945.835107.6351.03360.5
10348.6550.515156.569.27
1158.195140.08230.7286.005

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

GAT4#MA0302.1-10.001305380.6213610.54843610CAGAGTTCTAGAAAGATCTAAA+
ECM23#MA0293.100.001479760.7043650.54843611CAGAGTTCTAGTTTAGATCTTT-
SRD1#MA0389.1-30.002798561.332120.5484368CAGAGTTCTAGAGATCTAC+
GAT3#MA0301.1-30.003483751.658260.5520318CAGAGTTCTAGAGATCTACA+
MGA1#MA0336.140.01333476.347310.99869111CAGAGTTCTAGTTTAGAGTGTTCTATAGTCCT-
ABF2#MA0266.1-50.01576757.505350.9986916CAGAGTTCTAGCTCTAGA+
kni#MA0451.1-20.01735158.259320.9986919CAGAGTTCTAGGTGCTCTAGTTT-