Personal tools

MacroAPE 1083:CGTVTCAYCA,motif126

From FANTOM5_SSTAR

Jump to: navigation, search

Full Name: CGTVTCAYCA,motif126,CNhs13533,T:3256.0(64.39%),B:43720.8(54.22%),P:1e-48

Motif matrix
POACGT
1602.361751.728120.472781.44
2198.616143.2642738.296175.824
3976.8113.96439.561725.68
41286.12807.4881110.29648.84
5175.824136.7521110.2961833.128
6455.842585.26497.68117.216
72292.224166.056107.448690.272
8462.3521282.864214.8961295.888
9172.5681507.528755.392820.512
102165.24169.312107.448814

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

Six4#MA0204.1-12.79424e-050.01330060.02660126CGTATCATCAGTATCA-
so#MA0246.1-10.001192990.5678640.5678646CGTATCATCAGTATCA-
ABF1#MA0265.1-10.0033891.6131619CGTATCATCAATATCACTTTATACGA-
STP2#MA0395.1100.006771623.22329110CGTATCATCATGATCGGCGCCGCACGACGA+
Fos#MA0099.100.01024064.8745118CGTATCATCATGACTCAC-
AP1#MA0099.200.01481467.0517417CGTATCATCATGAGTCA-
NFE2L2#MA0150.130.01544777.3530918CGTATCATCATGCTGAGTCAT-
ARG80#MA0271.1-10.01556977.4111816CGTATCATCAGCGTCT-
STE12#MA0393.100.01810368.6172917CGTATCATCATGTTTCA-
ARG81#MA0272.100.01850678.8091818CGTATCATCAAGAGTCAC-
HAC1#MA0310.120.01971339.3835316CGTATCATCACACGTGTC-