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NonredundantMotifs:142

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Representative Motif


Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon
May 2013, Collection Name: Non-redundant known motifs
Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.
207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name  :non-redundant142
  • db  :SWISSREGULON
  • Id  :POU3F1..4.p2
  • name  :POU3F1
  • score  :0.0499083096501652
  • External refs:
EntrezGene:5453
UniProt:5453

  • Internal refs:
EntrezGene:5453


Motif matrix
POACGT
133.04626913.76331371.53179725.665831
259.0819028.54604859.87645616.502804
33.79815912.12252571.179804000000156.906722
430.89775412.65259699.0731511.383709
5134.5765261.3366922.8951855.198807
6101.5271051.0882744.58005636.811775
70.3635311.4675831.108087141.068009
831.8919982.3919156.552784103.170513
9108.19784915.0000472.3190318.490284
1077.61572630.60411134.9742660.813107
11117.0026495.82198418.6077652.574812
1268.74194425.57591847.0738322.615516
132.38991827.64269510.334816103.639781
1440.5344581.8523253.10773248.5127
1526.75753737.39710554.81389525.038673

Sub Motif Members