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NonredundantMotifs:19

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Representative Motif


Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon
May 2013, Collection Name: Non-redundant known motifs
Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.
207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name  :non-redundant19
  • db  :HOCOMOCO
  • Id  :LEF1_f1
  • name  :
  • score  :0.1646880722926334
  • External refs:
EntrezGene:51176
UniProt:51176

  • Internal refs:
EntrezGene:51176


Motif matrix
P0ACGT
10.2509170946441675663.872340425531982.3697725605282540.25091709464416756
21.00366837857667021.11518708730740920.064.6250917094645
30.00.00.066.7439471753486
40.00.00.066.7439471753486
50.00.066.74394717534860.0
634.515040352164393.7916360968452030.028.437270726338987
724.1438004402054532.2861335289801982.28613352898019838.02787967718271

Sub Motif Members