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NonredundantMotifs:68

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant68
  • db :UNIPROBE
  • Id :Srf_secondary
  • name :SCI09
  • score :1.6934130219534125
  • External refs:
EntrezGene:6722
UniProt:6722

  • Internal refs:
EntrezGene:6722


Motif matrix
P0ACGT
10.1629679147411350.2848278048228910.4409842180187250.111220062417249
20.1513917054900760.200635149463570.2053159278480080.442657217198346
30.2672150838191330.08366917851050820.1924975595675320.456618178102827
40.3327709170011630.1807108696805990.2000272370361560.286490976282082
50.5093695658377010.1029544119628030.2425688157509950.145107206448501
60.6662624970353370.07730942000234190.1544657390748820.101962343887439
70.7379684507785850.1133352141596280.1004005172281930.0482958178335944
80.65887797831070.1415798747407540.1340325547944890.0655095921540571
90.7661147938686550.09405074124326020.06976275731562720.0700717075724578
100.7556206182910910.08849137851015540.04480203648320950.111085966715544
110.7490832735317260.1359169640711780.04750957217765510.0674901902194415
120.6632313348241030.176795328676080.02813405092238410.131839285577432
130.5533580950607650.2776589038979710.03865517439946550.130327826641798
140.3925784419145550.3140825379367490.2098438152085810.0834952049401149
150.1984624495913870.2371317155920360.2394655908612390.324940243955339
160.275121281078580.2100873562949670.1947787186698540.320012643956599
170.2877475808414540.2773950488452050.1427036877267690.292153682586572

Sub Motif Members