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NonredundantMotifs:81

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Representative Motif


Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon
May 2013, Collection Name: Non-redundant known motifs
Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.
207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name  :non-redundant81
  • db  :HOCOMOCO
  • Id  :NRF1_f1
  • name  :
  • score  :2.270786702393942
  • External refs:
EntrezGene:4899
UniProt:4899

  • Internal refs:
EntrezGene:4899


Motif matrix
P0ACGT
1459.648237883781996.094776773431971224.89575922730459.3612261154826
2228.73565652784791341.176072363288159.73544651862176110.35282459023995
3142.889798935873770.925827387832711560.496781101045865.68759257525049
412.4969299521529061613.359009101849181.37118764288932.77287330311234
51640.364256689436475.3057413333358589.002261429548535.3277405476823
6197.13822138306224233.22683148024367526.6178427595805883.0171043771117
745.4450902265414134.8121906321644451505.2169955028444254.52572363845113
854.067345150398691672.102763492375341.67931550686244472.15057585036644
934.358506706508805117.023777177064261535.2496669117772153.36804920465113
1091.636102320542921587.7746509665565158.475492059280382.113754653623224
111344.8979947205348151.74442282809497300.4100141523377442.94756829903626
12278.0654036310247391.337742417677989.0245281868343181.572325764463

Sub Motif Members