Personal tools

CL:0000211: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 5: Line 5:
|def="A cell whose function is determined by the generation or the reception of an electric signal." [FB:ma]
|def="A cell whose function is determined by the generation or the reception of an electric signal." [FB:ma]
|xref=
|xref=
|is_a=CL:0000144
|is_a=CL:0000003
|synonym=
|synonym=
|comment=
|comment=
Line 14: Line 14:
|obo_creation_date=
|obo_creation_date=
|subset=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=

Revision as of 17:24, 26 June 2012

Name:electrically active cell
Namespace:cell
Definition:"A cell whose function is determined by the generation or the reception of an electric signal." [FB:ma]


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0000003(native cell)



Children


is a:CL:0000393 (electrically responsive cell),CL:0000404 (electrically signaling cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000211 (electrically active cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
7.68e-59FFCP PHASE1:Mm9::chr8:125944624..125944663,+#_bf019b343d6b1268795e7458dcb080b5p@chr8:125944624..125944663, +
7.68e-59FFCP PHASE2:Mm9::chr8:125944624..125944663,+#_bf019b343d6b1268795e7458dcb080b5p@chr8:125944624..125944663, +
2.59e-51FFCP PHASE1:Mm9::chr7:109167666..109167667,+#_ce3d873510f21ddb531e9ff3940dc411p@chr7:109167666..109167667, +
2.59e-51FFCP PHASE2:Mm9::chr7:109167666..109167667,+#_ce3d873510f21ddb531e9ff3940dc411p@chr7:109167666..109167667, +
1.25e-48FFCP PHASE2:Mm9::chr9:107659863..107659866,-#_e815d26d0202ae8f01bf16197ebf5493p@chr9:107659863..107659866, -
1.25e-48FFCP PHASE1:Mm9::chr9:107659863..107659866,-#_e815d26d0202ae8f01bf16197ebf5493p@chr9:107659863..107659866, -
4.57e-48FFCP PHASE2:Hg19::chr6:53359400..53359406,+#_53533fdc54bbf961979db8b324613d73p@chr6:53359400..53359406, +
4.57e-48FFCP PHASE1:Hg19::chr6:53359400..53359406,+#_53533fdc54bbf961979db8b324613d73p@chr6:53359400..53359406, +
3.21e-47FFCP PHASE1:Mm9::chr11:99071307..99071313,-#_c425f635a64f86737b8957c8c02ca7ccp@chr11:99071307..99071313, -
3.21e-47FFCP PHASE2:Mm9::chr11:99071307..99071313,-#_c425f635a64f86737b8957c8c02ca7ccp@chr11:99071307..99071313, -
6.42e-46FFCP PHASE2:Mm9::chr3:55849731..55849735,-#_60ef7cf52f8d9f6de98a06c8793f736bp@chr3:55849731..55849735, -
6.42e-46FFCP PHASE1:Mm9::chr3:55849731..55849735,-#_60ef7cf52f8d9f6de98a06c8793f736bp@chr3:55849731..55849735, -
8.26e-46FFCP PHASE1:Mm9::chr14:26427427..26427439,+#_7ee1b67c36fc332d58be8a42e8af139ep22@Zmiz1
8.26e-46FFCP PHASE2:Mm9::chr14:26427427..26427439,+#_7ee1b67c36fc332d58be8a42e8af139ep22@Zmiz1
2.04e-45FFCP PHASE1:Mm9::chr13:9279895..9279899,+#_8f00d19dca235f5842fe78a7b0a57896p@chr13:9279895..9279899, +
2.04e-45FFCP PHASE2:Mm9::chr13:9279895..9279899,+#_8f00d19dca235f5842fe78a7b0a57896p@chr13:9279895..9279899, +
2.16e-44FFCP PHASE1:Mm9::chr18:43504798..43504810,-#_337fb34286d2d8469f481c43b2f8a47ap@chr18:43504798..43504810, -
2.16e-44FFCP PHASE2:Mm9::chr18:43504798..43504810,-#_337fb34286d2d8469f481c43b2f8a47ap@chr18:43504798..43504810, -
7.54e-44FFCP PHASE1:Mm9::chr2:87366179..87366201,+#_9e3e8593b7105277b3600eb5e53318f2p1@ENSMUST00000167296
7.54e-44FFCP PHASE2:Mm9::chr2:87366179..87366201,+#_9e3e8593b7105277b3600eb5e53318f2p1@ENSMUST00000167296
7.6e-43FFCP PHASE2:Mm9::chr16:73045578..73045594,+#_47f8b1490b632f61827929d79f1da45ap@chr16:73045578..73045594, +
7.6e-43FFCP PHASE1:Mm9::chr16:73045578..73045594,+#_47f8b1490b632f61827929d79f1da45ap@chr16:73045578..73045594, +
2.67e-42FFCP PHASE1:Mm9::chr7:111031610..111031645,-#_9a5c9ea0fb3370178fd84070336b9aa0p1@ENSMUST00000120890
2.67e-42FFCP PHASE2:Mm9::chr7:111031610..111031645,-#_9a5c9ea0fb3370178fd84070336b9aa0p1@ENSMUST00000120890
3.4e-42FFCP PHASE1:Mm9::chr8:125944694..125944740,+#_bf4fd868243a7d29339e3401e2a8a5d2p@chr8:125944694..125944740, +
3.4e-42FFCP PHASE2:Mm9::chr8:125944694..125944740,+#_bf4fd868243a7d29339e3401e2a8a5d2p@chr8:125944694..125944740, +
9.71e-42FFCP PHASE2:Mm9::chr3:28664288..28664311,-#_8cbbad027263a43966cfa0684dc79112p1@LOC100505213
9.71e-42FFCP PHASE1:Mm9::chr3:28664288..28664311,-#_8cbbad027263a43966cfa0684dc79112p1@LOC100505213
4.89e-41FFCP PHASE1:Mm9::chr14:40284476..40284479,-#_207cfd1ec857f680650b9bd50d6f1eaep@chr14:40284476..40284479, -
4.89e-41FFCP PHASE2:Mm9::chr14:40284476..40284479,-#_207cfd1ec857f680650b9bd50d6f1eaep@chr14:40284476..40284479, -
9.42e-41FFCP PHASE1:Mm9::chr7:38554684..38554696,-#_105a9a94089fb374676f711b20e90db7p10@Zfp536
9.42e-41FFCP PHASE2:Mm9::chr7:38554684..38554696,-#_105a9a94089fb374676f711b20e90db7p10@Zfp536
4.15e-40FFCP PHASE1:Mm9::chr6:118147812..118147826,-#_c27c9a55c4df1cbeca385d32f5896547p4@Ret
4.15e-40FFCP PHASE2:Mm9::chr6:118147812..118147826,-#_c27c9a55c4df1cbeca385d32f5896547p4@Ret
4.09e-39FFCP PHASE1:Mm9::chr9:75414533..75414538,-#_5e002ccef37f639df67922dab9bd1445p@chr9:75414533..75414538, -
4.09e-39FFCP PHASE2:Mm9::chr9:75414533..75414538,-#_5e002ccef37f639df67922dab9bd1445p@chr9:75414533..75414538, -
4.27e-39FFCP PHASE2:Mm9::chr13:9277420..9277424,+#_c42c23688555d424c66211cf7a964e4ap@chr13:9277420..9277424, +
4.27e-39FFCP PHASE1:Mm9::chr13:9277420..9277424,+#_c42c23688555d424c66211cf7a964e4ap@chr13:9277420..9277424, +
6.79e-39FFCP PHASE2:Mm9::chr1:24619955..24619958,-#_10993d3a079d26c5f4fd60acffe16934p1@ENSMUST00000088336
6.79e-39FFCP PHASE1:Mm9::chr1:24619955..24619958,-#_10993d3a079d26c5f4fd60acffe16934p1@ENSMUST00000088336
5.18e-38FFCP PHASE2:Mm9::chr2:30663055..30663094,-#_c494d1ca3175e4c40bf98c52c4783df2p@chr2:30663055..30663094, -
5.18e-38FFCP PHASE1:Mm9::chr2:30663055..30663094,-#_c494d1ca3175e4c40bf98c52c4783df2p@chr2:30663055..30663094, -
2.92e-37FFCP PHASE1:Mm9::chr1:170361398..170361400,-#_2001674b1242fe102aa31a82a4099bafp@chr1:170361398..170361400, -
2.92e-37FFCP PHASE2:Mm9::chr1:170361398..170361400,-#_2001674b1242fe102aa31a82a4099bafp@chr1:170361398..170361400, -
4.85e-37FFCP PHASE1:Mm9::chr6:7933424..7933445,-#_481d7e264b9ba6a6adbad1b4411de3cdp1@ENSMUST00000057757
4.85e-37FFCP PHASE2:Mm9::chr6:7933424..7933445,-#_481d7e264b9ba6a6adbad1b4411de3cdp1@ENSMUST00000057757
5.38e-37FFCP PHASE1:Mm9::chr13:76079742..76079746,-#_55afe167464d5f8d8b39ffff41e9a253p@chr13:76079742..76079746, -
5.38e-37FFCP PHASE2:Mm9::chr13:76079742..76079746,-#_55afe167464d5f8d8b39ffff41e9a253p@chr13:76079742..76079746, -
1.05e-35FFCP PHASE1:Mm9::chr5:38550223..38550234,-#_a0e44e449782c9fd34cd99ef46e984e3p@chr5:38550223..38550234, -
1.05e-35FFCP PHASE2:Mm9::chr5:38550223..38550234,-#_a0e44e449782c9fd34cd99ef46e984e3p@chr5:38550223..38550234, -
1.19e-35FFCP PHASE2:Hg19::chr11:102661517..102661541,-#_0779d3461e74432a0cee453bcf89083bp@chr11:102661517..102661541, -
1.19e-35FFCP PHASE1:Hg19::chr11:102661517..102661541,-#_0779d3461e74432a0cee453bcf89083bp@chr11:102661517..102661541, -
3.1e-35FFCP PHASE2:Mm9::chr9:57389282..57389286,+#_13a117fcfb4b544956cad7187ccbe41ap@chr9:57389282..57389286, +
3.1e-35FFCP PHASE1:Mm9::chr9:57389282..57389286,+#_13a117fcfb4b544956cad7187ccbe41ap@chr9:57389282..57389286, +
3.77e-35FFCP PHASE2:Mm9::chr17:6106475..6106488,-#_55542b972bbc8d9ed904519a59f34354p@chr17:6106475..6106488, -
3.77e-35FFCP PHASE1:Mm9::chr17:6106475..6106488,-#_55542b972bbc8d9ed904519a59f34354p@chr17:6106475..6106488, -
3.99e-35FFCP PHASE1:Hg19::chr4:74703497..74703511,+#_91f478e28261451c209cebc7384bc022p@chr4:74703497..74703511, +
3.99e-35FFCP PHASE2:Hg19::chr4:74703497..74703511,+#_91f478e28261451c209cebc7384bc022p@chr4:74703497..74703511, +
7.17e-35FFCP PHASE1:Mm9::chr18:43481915..43481945,-#_5333a7e3802c13c56657b37b7c9a5971p2@uc008euf.1
7.17e-35FFCP PHASE2:Mm9::chr18:43481915..43481945,-#_5333a7e3802c13c56657b37b7c9a5971p2@uc008euf.1
7.88e-35FFCP PHASE2:Mm9::chr13:99383382..99383414,+#_732047249bfcb81bebc44de312b51be3p@chr13:99383382..99383414, +
7.88e-35FFCP PHASE1:Mm9::chr13:99383382..99383414,+#_732047249bfcb81bebc44de312b51be3p@chr13:99383382..99383414, +
8.35e-35FFCP PHASE2:Mm9::chr6:118147365..118147366,-#_f40854ee1e7ffc1a63e503a5b5f707b5p5@Ret
8.35e-35FFCP PHASE1:Mm9::chr6:118147365..118147366,-#_f40854ee1e7ffc1a63e503a5b5f707b5p5@Ret
1.22e-34FFCP PHASE1:Mm9::chr12:28025392..28025407,-#_4c47bb5ac9d2ee411cdc9d4f6874b8e9p@chr12:28025392..28025407, -
1.22e-34FFCP PHASE2:Mm9::chr12:28025392..28025407,-#_4c47bb5ac9d2ee411cdc9d4f6874b8e9p@chr12:28025392..28025407, -
1.26e-34FFCP PHASE1:Mm9::chr12:55340225..55340232,+#_4e2cd5ab8bff942b69280cb26ef03fcfp1@ENSMUST00000082671
1.26e-34FFCP PHASE2:Mm9::chr12:55340225..55340232,+#_4e2cd5ab8bff942b69280cb26ef03fcfp1@ENSMUST00000082671
1.27e-34FFCP PHASE2:Hg19::chr4:7846444..7846449,-#_e86702a08e1b8542f93def6566fb83a1p@chr4:7846444..7846449, -
1.27e-34FFCP PHASE1:Hg19::chr4:7846444..7846449,-#_e86702a08e1b8542f93def6566fb83a1p@chr4:7846444..7846449, -
1.32e-34FFCP PHASE1:Mm9::chr17:6106489..6106539,-#_089c1e8912eed0102190359a3c674f98p@chr17:6106489..6106539, -
1.32e-34FFCP PHASE2:Mm9::chr17:6106489..6106539,-#_089c1e8912eed0102190359a3c674f98p@chr17:6106489..6106539, -
1.35e-34FFCP PHASE1:Mm9::chr13:100191678..100191695,-#_9dec1519464691d959ff2aaf92cc441cp@chr13:100191678..100191695, -
1.35e-34FFCP PHASE2:Mm9::chr13:100191678..100191695,-#_9dec1519464691d959ff2aaf92cc441cp@chr13:100191678..100191695, -
1.95e-34FFCP PHASE1:Hg19::chr4:74702666..74702694,+#_09394b561711fdffa00e00ba247f61a5p3@CXCL6
1.95e-34FFCP PHASE2:Hg19::chr4:74702666..74702694,+#_09394b561711fdffa00e00ba247f61a5p3@CXCL6
2.1e-34FFCP PHASE1:Mm9::chr12:52941704..52941726,-#_ac459c0dd1b02ac2ecb02a09df8d2486p@chr12:52941704..52941726, -
2.1e-34FFCP PHASE2:Mm9::chr12:52941704..52941726,-#_ac459c0dd1b02ac2ecb02a09df8d2486p@chr12:52941704..52941726, -
6.31e-34FFCP PHASE1:Mm9::chr6:146526110..146526114,-#_0f9b9239c4d7304e2d4ea8877ed9cfedp6@4933424B01Rik
6.31e-34FFCP PHASE2:Mm9::chr6:146526110..146526114,-#_0f9b9239c4d7304e2d4ea8877ed9cfedp6@4933424B01Rik
1.4e-33FFCP PHASE1:Hg19::chr7:102553470..102553487,+#_6227758d0d8275fb089212ac82de5f8fp2@LRRC17
1.4e-33FFCP PHASE2:Hg19::chr7:102553470..102553487,+#_6227758d0d8275fb089212ac82de5f8fp2@LRRC17
1.91e-33FFCP PHASE1:Mm9::chr9:49312416..49312430,-#_09ea1c46e7b7f39b8e0aa2c992bbdd0cp@chr9:49312416..49312430, -
1.91e-33FFCP PHASE2:Mm9::chr9:49312416..49312430,-#_09ea1c46e7b7f39b8e0aa2c992bbdd0cp@chr9:49312416..49312430, -
2.11e-33FFCP PHASE1:Mm9::chr10:57504783..57504796,+#_9e19ec54607b5c4c1cb0604f860de324p4@Fabp7
2.11e-33FFCP PHASE2:Mm9::chr10:57504783..57504796,+#_9e19ec54607b5c4c1cb0604f860de324p4@Fabp7
4.29e-33FFCP PHASE2:Mm9::chr8:125941995..125942014,+#_47103df60ff80a1a71562125bd0efcf0p@chr8:125941995..125942014, +
4.29e-33FFCP PHASE1:Mm9::chr8:125941995..125942014,+#_47103df60ff80a1a71562125bd0efcf0p@chr8:125941995..125942014, +
4.7e-33FFCP PHASE1:Mm9::chr18:43514435..43514457,-#_d7796ad826625762bf970c3cb427a24dp@chr18:43514435..43514457, -
4.7e-33FFCP PHASE2:Mm9::chr18:43514435..43514457,-#_d7796ad826625762bf970c3cb427a24dp@chr18:43514435..43514457, -
4.83e-33FFCP PHASE1:Mm9::chr11:104189552..104189556,-#_7c8dc567ac4199ea4fd7cf65933382d4p@chr11:104189552..104189556, -
4.83e-33FFCP PHASE2:Mm9::chr11:104189552..104189556,-#_7c8dc567ac4199ea4fd7cf65933382d4p@chr11:104189552..104189556, -
5.77e-33FFCP PHASE2:Hg19::chr4:169059590..169059615,+#_b604b00079ae4d4dbc842a0334170b8fp@chr4:169059590..169059615, +
5.77e-33FFCP PHASE1:Hg19::chr4:169059590..169059615,+#_b604b00079ae4d4dbc842a0334170b8fp@chr4:169059590..169059615, +
6.16e-33FFCP PHASE2:Mm9::chr6:134489536..134489540,-#_495348cf142e4d5abacba0217bd557adp@chr6:134489536..134489540, -
6.16e-33FFCP PHASE1:Mm9::chr6:134489536..134489540,-#_495348cf142e4d5abacba0217bd557adp@chr6:134489536..134489540, -
6.37e-33FFCP PHASE2:Mm9::chr1:38851929..38851932,-#_695af39dced8c472b18976d4389e92b1p@chr1:38851929..38851932, -
6.37e-33FFCP PHASE1:Mm9::chr1:38851929..38851932,-#_695af39dced8c472b18976d4389e92b1p@chr1:38851929..38851932, -
1.01e-32FFCP PHASE2:Mm9::chr8:87230210..87230227,-#_429ce225f3ca1c4613ccb7d59cce8366p@chr8:87230210..87230227, -
1.01e-32FFCP PHASE1:Mm9::chr8:87230210..87230227,-#_429ce225f3ca1c4613ccb7d59cce8366p@chr8:87230210..87230227, -