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{{UBERON
{{UBERON
|id=UBERON:0003067
|alt_id=UBERON:XAO_0000187-ZFA_0001310
|name=dorsolateral placode
|namespace=
|def="Lateral neurogenic placodes positioned dorsal of the epibranchial placodes." [ZFIN:curator]
|xref=TAO:0001310;;VHOG:0000103;;XAO:0000187;;ZFA:0001310
|is_a=UBERON:0009955
|synonym="dorsolateral placodes" EXACT PLURAL [ZFA:0001310]
|comment=
|comment=
|alt_id=UBERON:XAO_0000187-ZFA_0001310
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="Lateral neurogenic placodes positioned dorsal of the epibranchial placodes." [ZFIN:curator]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0003067
|is_a=UBERON:0009955
|is_obsolete=
|located_in=
|located_in=
|name=dorsolateral placode
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="dorsolateral placodes" EXACT PLURAL [ZFA:0001310]
|union_of=
|xref=TAO:0001310;;VHOG:0000103;;XAO:0000187;;ZFA:0001310
}}
}}

Latest revision as of 17:36, 12 September 2014

Name:dorsolateral placode
Namespace:FANTOM
Definition:"Lateral neurogenic placodes positioned dorsal of the epibranchial placodes." [ZFIN:curator]
Xrefs:
links:

TAO:0001310
VHOG:0000103
XAO:0000187

ZFA:0001310
Synonyms: "dorsolateral placodes" EXACT PLURAL [ZFA:0001310]
Alt_id: UBERON:XAO_0000187-ZFA_0001310

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0009955(neurogenic placode)



Children

is a:UBERON:0003069 (otic placode)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003067 (dorsolateral placode), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE1:Mm9::chr1:172843796..172843799,-#_6f69956b8073250c371333dfea6820cep@chr1:172843796..172843799, -
1.87e-86FFCP PHASE2:Mm9::chr3:81012915..81012923,+#_6f69956b8073250c371333dfea6820cep@chr3:81012915..81012923, +
1.87e-86FFCP PHASE2:Mm9::chr10:107349309..107349318,-#_6f69956b8073250c371333dfea6820cep4@Otogl
1.87e-86FFCP PHASE1:Mm9::chr5:68423014..68423037,+#_6f69956b8073250c371333dfea6820cep1@Grxcr1
1.87e-86FFCP PHASE1:Mm9::chr18:66033526..66033539,-#_6f69956b8073250c371333dfea6820cep@chr18:66033526..66033539, -
1.87e-86FFCP PHASE2:Mm9::chr17:13983179..13983190,+#_6f69956b8073250c371333dfea6820cep@chr17:13983179..13983190, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207965..42207978,-#_6f69956b8073250c371333dfea6820cep5@Tecta
1.87e-86FFCP PHASE2:Mm9::chr9:42206784..42206793,-#_6f69956b8073250c371333dfea6820cep@chr9:42206784..42206793, -
1.87e-86FFCP PHASE2:Mm9::chr19:55255289..55255299,+#_6f69956b8073250c371333dfea6820cep2@Tectb
1.87e-86FFCP PHASE2:Mm9::chr5:21371424..21371435,-#_6f69956b8073250c371333dfea6820cep2@Slc26a5
1.87e-86FFCP PHASE2:Mm9::chr11:120222470..120222516,+#_6f69956b8073250c371333dfea6820cep2@Fscn2
1.87e-86FFCP PHASE1:Mm9::chr3:35012425..35012439,+#_6f69956b8073250c371333dfea6820cep@chr3:35012425..35012439, +
1.87e-86FFCP PHASE1:Mm9::chr13:58283583..58283607,-#_6f69956b8073250c371333dfea6820cep@chr13:58283583..58283607, -
1.87e-86FFCP PHASE2:Mm9::chr11:102123554..102123566,+#_6f69956b8073250c371333dfea6820cep4@BC030867
1.87e-86FFCP PHASE2:Mm9::chr5:28035962..28035983,+#_6f69956b8073250c371333dfea6820cep@chr5:28035962..28035983, +
1.87e-86FFCP PHASE2:Mm9::chr2:29935952..29935993,+#_6f69956b8073250c371333dfea6820cep7@Pkn3
1.87e-86FFCP PHASE1:Mm9::chr5:30710416..30710440,-#_6f69956b8073250c371333dfea6820cep2@Otof
1.87e-86FFCP PHASE1:Mm9::chr9:42206784..42206793,-#_6f69956b8073250c371333dfea6820cep@chr9:42206784..42206793, -
1.87e-86FFCP PHASE1:Mm9::chr2:67011941..67011951,+#_6f69956b8073250c371333dfea6820cep3@Gm1322
1.87e-86FFCP PHASE1:Mm9::chr12:13508015..13508019,+#_6f69956b8073250c371333dfea6820cep@chr12:13508015..13508019, +
1.87e-86FFCP PHASE2:Mm9::chr1:93235228..93235249,+#_6f69956b8073250c371333dfea6820cep@chr1:93235228..93235249, +
1.87e-86FFCP PHASE2:Mm9::chr15:12848147..12848162,+#_6f69956b8073250c371333dfea6820cep@chr15:12848147..12848162, +
1.87e-86FFCP PHASE1:Mm9::chr4:154208086..154208123,+#_6f69956b8073250c371333dfea6820cep@chr4:154208086..154208123, +
1.87e-86FFCP PHASE1:Mm9::chr3:154459184..154459195,+#_6f69956b8073250c371333dfea6820cep@chr3:154459184..154459195, +
1.87e-86FFCP PHASE2:Mm9::chr13:78257518..78257522,+#_6f69956b8073250c371333dfea6820cep@chr13:78257518..78257522, +
1.87e-86FFCP PHASE2:Mm9::chr1:16651649..16651655,+#_6f69956b8073250c371333dfea6820cep@chr1:16651649..16651655, +
1.87e-86FFCP PHASE1:Mm9::chr11:120222470..120222516,+#_6f69956b8073250c371333dfea6820cep2@Fscn2
1.87e-86FFCP PHASE2:Mm9::chr19:21028739..21028785,-#_6f69956b8073250c371333dfea6820cep1@Tmc1
1.87e-86FFCP PHASE2:Mm9::chr2:9811162..9811171,-#_6f69956b8073250c371333dfea6820cep2@9230102O04Rik
1.87e-86FFCP PHASE1:Mm9::chr10:67371994..67372010,+#_6f69956b8073250c371333dfea6820cep@chr10:67371994..67372010, +
1.87e-86FFCP PHASE2:Mm9::chr14:102297728..102297742,+#_6f69956b8073250c371333dfea6820cep@chr14:102297728..102297742, +
1.87e-86FFCP PHASE1:Mm9::chr9:50968647..50968668,-#_6f69956b8073250c371333dfea6820cep@chr9:50968647..50968668, -
1.87e-86FFCP PHASE2:Mm9::chr11:8405038..8405048,-#_6f69956b8073250c371333dfea6820cep@chr11:8405038..8405048, -
1.87e-86FFCP PHASE2:Mm9::chr7:109265277..109265288,-#_6f69956b8073250c371333dfea6820cep4@Chrna10
1.87e-86FFCP PHASE2:Mm9::chr5:30710403..30710406,-#_6f69956b8073250c371333dfea6820cep10@Otof
1.87e-86FFCP PHASE1:Mm9::chr18:81327205..81327211,+#_6f69956b8073250c371333dfea6820cep@chr18:81327205..81327211, +
1.87e-86FFCP PHASE2:Mm9::chr17:31335953..31335957,-#_6f69956b8073250c371333dfea6820cep3@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr9:42207792..42207805,-#_6f69956b8073250c371333dfea6820cep11@Tecta
1.87e-86FFCP PHASE1:Mm9::chr8:13414266..13414279,+#_6f69956b8073250c371333dfea6820cep@chr8:13414266..13414279, +
1.87e-86FFCP PHASE2:Mm9::chr15:89215306..89215315,+#_6f69956b8073250c371333dfea6820cep@chr15:89215306..89215315, +
1.87e-86FFCP PHASE2:Mm9::chr7:109052262..109052291,-#_6f69956b8073250c371333dfea6820cep1@Tomt
1.87e-86FFCP PHASE1:Mm9::chr15:58480061..58480066,+#_6f69956b8073250c371333dfea6820cep5@Fer1l6
1.87e-86FFCP PHASE1:Mm9::chr4:115556989..115556997,+#_6f69956b8073250c371333dfea6820cep1@Kncn
1.87e-86FFCP PHASE1:Mm9::chr18:59222033..59222043,+#_6f69956b8073250c371333dfea6820cep7@A730017C20Rik
1.87e-86FFCP PHASE2:Mm9::chr8:13414289..13414295,+#_6f69956b8073250c371333dfea6820cep@chr8:13414289..13414295, +
1.87e-86FFCP PHASE2:Mm9::chr9:66860888..66860899,+#_6f69956b8073250c371333dfea6820cep@chr9:66860888..66860899, +
1.87e-86FFCP PHASE2:Mm9::chr2:53464178..53464186,+#_6f69956b8073250c371333dfea6820cep@chr2:53464178..53464186, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207792..42207805,-#_6f69956b8073250c371333dfea6820cep11@Tecta
1.87e-86FFCP PHASE1:Mm9::chr14:31283085..31283097,-#_6f69956b8073250c371333dfea6820cep@chr14:31283085..31283097, -
1.87e-86FFCP PHASE1:Mm9::chr2:73232344..73232356,-#_6f69956b8073250c371333dfea6820cep@chr2:73232344..73232356, -
1.87e-86FFCP PHASE1:Mm9::chr1:93218682..93218691,+#_6f69956b8073250c371333dfea6820cep2@Espnl
1.87e-86FFCP PHASE1:Mm9::chr7:88068153..88068160,-#_6f69956b8073250c371333dfea6820cep10@Sec11a
1.87e-86FFCP PHASE1:Mm9::chr17:13983102..13983126,+#_6f69956b8073250c371333dfea6820cep@chr17:13983102..13983126, +
1.87e-86FFCP PHASE2:Mm9::chr12:109905399..109905416,+#_6f69956b8073250c371333dfea6820cep@chr12:109905399..109905416, +
1.87e-86FFCP PHASE1:Mm9::chr15:103146966..103146971,-#_6f69956b8073250c371333dfea6820cep@chr15:103146966..103146971, -
1.87e-86FFCP PHASE1:Mm9::chr3:31585340..31585360,+#_6f69956b8073250c371333dfea6820cep@chr3:31585340..31585360, +
1.87e-86FFCP PHASE2:Mm9::chr4:101908153..101908163,+#_6f69956b8073250c371333dfea6820cep@chr4:101908153..101908163, +
1.87e-86FFCP PHASE2:Mm9::chr16:93971357..93971363,-#_6f69956b8073250c371333dfea6820cep@chr16:93971357..93971363, -
1.87e-86FFCP PHASE1:Mm9::chr8:94180607..94180619,-#_6f69956b8073250c371333dfea6820cep@chr8:94180607..94180619, -
1.87e-86FFCP PHASE1:Mm9::chr13:78322370..78322376,-#_6f69956b8073250c371333dfea6820cep4@uc007rhb.1
1.87e-86FFCP PHASE1:Mm9::chr2:170417150..170417155,-#_6f69956b8073250c371333dfea6820cep@chr2:170417150..170417155, -
1.87e-86FFCP PHASE1:Mm9::chr5:21371424..21371435,-#_6f69956b8073250c371333dfea6820cep2@Slc26a5
1.87e-86FFCP PHASE1:Mm9::chr15:89215306..89215315,+#_6f69956b8073250c371333dfea6820cep@chr15:89215306..89215315, +
1.87e-86FFCP PHASE1:Mm9::chr10:107349430..107349440,-#_6f69956b8073250c371333dfea6820cep3@Otogl
1.87e-86FFCP PHASE1:Mm9::chr12:109905468..109905474,+#_6f69956b8073250c371333dfea6820cep@chr12:109905468..109905474, +
1.87e-86FFCP PHASE2:Mm9::chr10:97109753..97109764,+#_6f69956b8073250c371333dfea6820cep3@Epyc
1.87e-86FFCP PHASE2:Mm9::chr2:121206677..121206683,-#_6f69956b8073250c371333dfea6820cep3@Strc
1.87e-86FFCP PHASE1:Mm9::chr6:30619378..30619412,-#_6f69956b8073250c371333dfea6820cep11@Tsga14
1.87e-86FFCP PHASE1:Mm9::chr16:93971325..93971337,-#_6f69956b8073250c371333dfea6820cep@chr16:93971325..93971337, -
1.87e-86FFCP PHASE2:Mm9::chr6:113251570..113251578,+#_6f69956b8073250c371333dfea6820cep@chr6:113251570..113251578, +
1.87e-86FFCP PHASE2:Mm9::chr13:76964459..76964469,+#_6f69956b8073250c371333dfea6820cep15@Mctp1
1.87e-86FFCP PHASE1:Mm9::chr2:14685072..14685084,+#_6f69956b8073250c371333dfea6820cep41@Cacnb2
1.87e-86FFCP PHASE2:Mm9::chr2:73232344..73232356,-#_6f69956b8073250c371333dfea6820cep@chr2:73232344..73232356, -
1.87e-86FFCP PHASE2:Mm9::chr1:172843885..172843890,-#_6f69956b8073250c371333dfea6820cep@chr1:172843885..172843890, -
1.87e-86FFCP PHASE1:Mm9::chr7:139597684..139597691,+#_6f69956b8073250c371333dfea6820cep@chr7:139597684..139597691, +
1.87e-86FFCP PHASE1:Mm9::chr11:8405038..8405048,-#_6f69956b8073250c371333dfea6820cep@chr11:8405038..8405048, -
1.87e-86FFCP PHASE1:Mm9::chr19:21028739..21028785,-#_6f69956b8073250c371333dfea6820cep1@Tmc1
1.87e-86FFCP PHASE1:Mm9::chr14:63099970..63099980,-#_6f69956b8073250c371333dfea6820cep@chr14:63099970..63099980, -
1.87e-86FFCP PHASE2:Mm9::chr3:154459184..154459195,+#_6f69956b8073250c371333dfea6820cep@chr3:154459184..154459195, +
1.87e-86FFCP PHASE2:Mm9::chr2:67011941..67011951,+#_6f69956b8073250c371333dfea6820cep3@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr9:42207983..42207995,-#_6f69956b8073250c371333dfea6820cep3@Tecta
1.87e-86FFCP PHASE1:Mm9::chr17:31335869..31335899,-#_6f69956b8073250c371333dfea6820cep1@Tmprss3
1.87e-86FFCP PHASE1:Mm9::chr5:144115382..144115389,+#_6f69956b8073250c371333dfea6820cep@chr5:144115382..144115389, +
1.87e-86FFCP PHASE1:Mm9::chr1:172843813..172843834,-#_6f69956b8073250c371333dfea6820cep@chr1:172843813..172843834, -
1.87e-86FFCP PHASE2:Mm9::chr10:107349378..107349390,-#_6f69956b8073250c371333dfea6820cep1@Otogl
1.87e-86FFCP PHASE1:Mm9::chr5:72652660..72652667,+#_6f69956b8073250c371333dfea6820cep@chr5:72652660..72652667, +
1.87e-86FFCP PHASE2:Mm9::chr17:13983198..13983203,+#_6f69956b8073250c371333dfea6820cep@chr17:13983198..13983203, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207983..42207995,-#_6f69956b8073250c371333dfea6820cep3@Tecta
1.87e-86FFCP PHASE1:Mm9::chr14:47293487..47293493,-#_6f69956b8073250c371333dfea6820cep@chr14:47293487..47293493, -
1.87e-86FFCP PHASE1:Mm9::chr7:53496326..53496340,+#_6f69956b8073250c371333dfea6820cep1@Otog
1.87e-86FFCP PHASE1:Mm9::chr12:77084875..77084885,+#_6f69956b8073250c371333dfea6820cep@chr12:77084875..77084885, +
1.87e-86FFCP PHASE2:Mm9::chr13:43699188..43699216,+#_6f69956b8073250c371333dfea6820cep@chr13:43699188..43699216, +
1.87e-86FFCP PHASE2:Mm9::chr9:42207375..42207384,-#_6f69956b8073250c371333dfea6820cep@chr9:42207375..42207384, -
1.87e-86FFCP PHASE2:Mm9::chr19:55256373..55256384,+#_6f69956b8073250c371333dfea6820cep@chr19:55256373..55256384, +
1.87e-86FFCP PHASE1:Mm9::chr2:121206667..121206674,-#_6f69956b8073250c371333dfea6820cep2@Strc
1.87e-86FFCP PHASE2:Mm9::chr1:60561636..60561645,-#_6f69956b8073250c371333dfea6820cep@chr1:60561636..60561645, -
1.87e-86FFCP PHASE2:Mm9::chr7:133957514..133957529,+#_6f69956b8073250c371333dfea6820cep@chr7:133957514..133957529, +
1.87e-86FFCP PHASE2:Mm9::chr5:144115382..144115389,+#_6f69956b8073250c371333dfea6820cep@chr5:144115382..144115389, +
1.87e-86FFCP PHASE1:Mm9::chr5:30710455..30710464,-#_6f69956b8073250c371333dfea6820cep9@Otof
1.87e-86FFCP PHASE2:Mm9::chr13:58283583..58283607,-#_6f69956b8073250c371333dfea6820cep@chr13:58283583..58283607, -

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