Personal tools

CL:0000181: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 5: Line 5:
|def="A cell whose primary function is intermediary metabolism." [FB:ma]
|def="A cell whose primary function is intermediary metabolism." [FB:ma]
|xref=
|xref=
|is_a=CL:0000144
|is_a=CL:0000003
|synonym=
|synonym=
|comment=
|comment=
Line 14: Line 14:
|obo_creation_date=
|obo_creation_date=
|subset=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=

Revision as of 17:24, 26 June 2012

Name:metabolising cell
Namespace:cell
Definition:"A cell whose primary function is intermediary metabolism." [FB:ma]


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0000003(native cell)



Children


is a:CL:0000182 (hepatocyte)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000181 (metabolising cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


No analysis results for this cluster