Personal tools

UBERON:0000083

From FANTOM5_SSTAR

Revision as of 17:08, 15 June 2012 by Autoedit (talk | contribs)
Jump to: navigation, search

Name:mesonephric tubule
Definition:"A mesonephric tubule is an epithelial tube that is part of the mesonephros[GO]. Genital ridge that is next to the mesonephros[WP]." [Wikipedia:Mesonephric_tubules]
Xrefs:
links:

AAO:0010389
EHDAA2:0001134
EMAPA:27588
EMAPA:27659
VHOG:0000500

XAO:0000148
Comments:TODO check

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0003914(epithelial tube),UBERON:0005103(mesonephric epithelium),UBERON:0006555(excretory tube)
part_of:UBERON:0000080(mesonephros)



Children

is a:UBERON:0000084 (ureteric bud),UBERON:0003074 (mesonephric duct)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000083 (mesonephric tubule), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.58e-86FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_820dac00011a0f37d66f1bb1ee8d23e8p4@Spink12
1.58e-86FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_820dac00011a0f37d66f1bb1ee8d23e8p4@Spink12
3.28e-58FFCP PHASE1:Mm9::chr2:160573108..160573123,+#_a864da2db5f3afbc8f42cb20d942e524p@chr2:160573108..160573123, +
3.28e-58FFCP PHASE1:Mm9::chr11:20817297..20817313,+#_a864da2db5f3afbc8f42cb20d942e524p@chr11:20817297..20817313, +
3.28e-58FFCP PHASE2:Mm9::chr1:90155923..90155932,+#_a864da2db5f3afbc8f42cb20d942e524p@chr1:90155923..90155932, +
3.28e-58FFCP PHASE1:Mm9::chr2:74440187..74440209,-#_a864da2db5f3afbc8f42cb20d942e524p@chr2:74440187..74440209, -
3.28e-58FFCP PHASE1:Mm9::chr1:156048695..156048707,+#_a864da2db5f3afbc8f42cb20d942e524p@chr1:156048695..156048707, +
3.28e-58FFCP PHASE1:Mm9::chr5:31379550..31379559,+#_a864da2db5f3afbc8f42cb20d942e524p@chr5:31379550..31379559, +
3.28e-58FFCP PHASE2:Mm9::chr8:25706249..25706254,+#_a864da2db5f3afbc8f42cb20d942e524p@chr8:25706249..25706254, +
3.28e-58FFCP PHASE2:Mm9::chr13:21379098..21379104,-#_a864da2db5f3afbc8f42cb20d942e524p@chr13:21379098..21379104, -
3.28e-58FFCP PHASE1:Mm9::chr10:91753336..91753348,-#_a864da2db5f3afbc8f42cb20d942e524p@chr10:91753336..91753348, -
3.28e-58FFCP PHASE1:Mm9::chr9:65941913..65941923,-#_a864da2db5f3afbc8f42cb20d942e524p@chr9:65941913..65941923, -
3.28e-58FFCP PHASE1:Mm9::chr2:152302813..152302821,+#_a864da2db5f3afbc8f42cb20d942e524p3@Defb20
3.28e-58FFCP PHASE2:Mm9::chr1:87936238..87936249,+#_a864da2db5f3afbc8f42cb20d942e524p@chr1:87936238..87936249, +
3.28e-58FFCP PHASE1:Mm9::chr14:63611201..63611210,+#_a864da2db5f3afbc8f42cb20d942e524p@chr14:63611201..63611210, +
3.28e-58FFCP PHASE1:Mm9::chr13:21381777..21381789,-#_a864da2db5f3afbc8f42cb20d942e524p@chr13:21381777..21381789, -
3.28e-58FFCP PHASE1:Mm9::chr8:19141371..19141383,+#_a864da2db5f3afbc8f42cb20d942e524p@chr8:19141371..19141383, +
3.28e-58FFCP PHASE1:Mm9::chr17:73221062..73221084,+#_a864da2db5f3afbc8f42cb20d942e524p@chr17:73221062..73221084, +
3.28e-58FFCP PHASE1:Mm9::chr13:52712765..52712772,+#_a864da2db5f3afbc8f42cb20d942e524p@chr13:52712765..52712772, +
3.28e-58FFCP PHASE2:Mm9::chr2:148625223..148625234,+#_a864da2db5f3afbc8f42cb20d942e524p@chr2:148625223..148625234, +
3.28e-58FFCP PHASE1:Mm9::chrX:130496372..130496393,-#_a864da2db5f3afbc8f42cb20d942e524p@chrX:130496372..130496393, -
3.28e-58FFCP PHASE2:Mm9::chr5:110773718..110773729,+#_a864da2db5f3afbc8f42cb20d942e524p@chr5:110773718..110773729, +
3.28e-58FFCP PHASE1:Mm9::chr1:155722142..155722175,-#_a864da2db5f3afbc8f42cb20d942e524p@chr1:155722142..155722175, -
3.28e-58FFCP PHASE2:Mm9::chr11:116901496..116901514,-#_a864da2db5f3afbc8f42cb20d942e524p1@ENSMUST00000150628, p1@ENSMUST00000152401, p1@uc007mmw.1
3.28e-58FFCP PHASE2:Mm9::chr12:16664775..16664784,+#_a864da2db5f3afbc8f42cb20d942e524p@chr12:16664775..16664784, +
3.28e-58FFCP PHASE1:Mm9::chr5:31377177..31377184,+#_a864da2db5f3afbc8f42cb20d942e524p@chr5:31377177..31377184, +
3.28e-58FFCP PHASE2:Mm9::chr5:100634942..100634968,+#_a864da2db5f3afbc8f42cb20d942e524p@chr5:100634942..100634968, +
3.28e-58FFCP PHASE1:Mm9::chr15:54678983..54678995,-#_a864da2db5f3afbc8f42cb20d942e524p@chr15:54678983..54678995, -
3.28e-58FFCP PHASE2:Mm9::chr2:152302813..152302821,+#_a864da2db5f3afbc8f42cb20d942e524p3@Defb20
3.28e-58FFCP PHASE1:Mm9::chr9:56469136..56469145,-#_a864da2db5f3afbc8f42cb20d942e524p@chr9:56469136..56469145, -
3.28e-58FFCP PHASE1:Mm9::chr4:150092027..150092070,-#_a864da2db5f3afbc8f42cb20d942e524p@chr4:150092027..150092070, -
3.28e-58FFCP PHASE2:Mm9::chr6:83487114..83487124,-#_a864da2db5f3afbc8f42cb20d942e524p@chr6:83487114..83487124, -
3.28e-58FFCP PHASE1:Mm9::chr3:103650730..103650741,+#_a864da2db5f3afbc8f42cb20d942e524p@chr3:103650730..103650741, +
3.28e-58FFCP PHASE1:Mm9::chr1:36016859..36016897,+#_a864da2db5f3afbc8f42cb20d942e524p@chr1:36016859..36016897, +
3.28e-58FFCP PHASE2:Mm9::chrX:12571679..12571688,-#_a864da2db5f3afbc8f42cb20d942e524p@chrX:12571679..12571688, -
3.28e-58FFCP PHASE2:Mm9::chr13:21385729..21385768,+#_a864da2db5f3afbc8f42cb20d942e524p@chr13:21385729..21385768, +
3.28e-58FFCP PHASE2:Mm9::chr15:54678902..54678911,-#_a864da2db5f3afbc8f42cb20d942e524p@chr15:54678902..54678911, -
3.28e-58FFCP PHASE1:Mm9::chr13:21385729..21385768,+#_a864da2db5f3afbc8f42cb20d942e524p@chr13:21385729..21385768, +
3.28e-58FFCP PHASE2:Mm9::chr5:31379437..31379448,+#_a864da2db5f3afbc8f42cb20d942e524p@chr5:31379437..31379448, +
3.28e-58FFCP PHASE1:Mm9::chrX:12571679..12571688,-#_a864da2db5f3afbc8f42cb20d942e524p@chrX:12571679..12571688, -
3.28e-58FFCP PHASE1:Mm9::chr9:26730625..26730636,-#_a864da2db5f3afbc8f42cb20d942e524p3@Gm1110
3.28e-58FFCP PHASE2:Mm9::chr18:44261480..44261486,+#_a864da2db5f3afbc8f42cb20d942e524p@chr18:44261480..44261486, +
3.28e-58FFCP PHASE1:Mm9::chr16:25752183..25752203,+#_a864da2db5f3afbc8f42cb20d942e524p@chr16:25752183..25752203, +
3.28e-58FFCP PHASE1:Mm9::chr14:66589365..66589371,+#_a864da2db5f3afbc8f42cb20d942e524p19@Clu
3.28e-58FFCP PHASE1:Mm9::chr11:116901482..116901494,-#_a864da2db5f3afbc8f42cb20d942e524p2@ENSMUST00000152401
3.28e-58FFCP PHASE1:Mm9::chr14:103746280..103746298,+#_a864da2db5f3afbc8f42cb20d942e524p@chr14:103746280..103746298, +
3.28e-58FFCP PHASE2:Mm9::chr2:25677632..25677636,-#_a864da2db5f3afbc8f42cb20d942e524p@chr2:25677632..25677636, -
3.28e-58FFCP PHASE2:Mm9::chr14:69116075..69116107,-#_a864da2db5f3afbc8f42cb20d942e524p@chr14:69116075..69116107, -
3.28e-58FFCP PHASE1:Mm9::chr9:35651679..35651691,-#_a864da2db5f3afbc8f42cb20d942e524p5@9230110F15Rik
3.28e-58FFCP PHASE2:Mm9::chrX:75798097..75798101,-#_a864da2db5f3afbc8f42cb20d942e524p@chrX:75798097..75798101, -
3.28e-58FFCP PHASE2:Mm9::chr8:22061771..22061777,-#_a864da2db5f3afbc8f42cb20d942e524p3@Gm6040, p3@LOC100503992
3.28e-58FFCP PHASE2:Mm9::chr3:107731917..107731926,-#_a864da2db5f3afbc8f42cb20d942e524p@chr3:107731917..107731926, -
3.28e-58FFCP PHASE2:Mm9::chr3:103650817..103650825,+#_a864da2db5f3afbc8f42cb20d942e524p@chr3:103650817..103650825, +
3.28e-58FFCP PHASE2:Mm9::chr11:101958844..101958851,-#_a864da2db5f3afbc8f42cb20d942e524p@chr11:101958844..101958851, -
3.28e-58FFCP PHASE2:Mm9::chr1:155738967..155738974,+#_a864da2db5f3afbc8f42cb20d942e524p@chr1:155738967..155738974, +
3.28e-58FFCP PHASE1:Mm9::chr11:59845349..59845371,-#_a864da2db5f3afbc8f42cb20d942e524p@chr11:59845349..59845371, -
3.28e-58FFCP PHASE1:Mm9::chr1:18213651..18213663,-#_a864da2db5f3afbc8f42cb20d942e524p1@Defb44-ps
3.28e-58FFCP PHASE2:Mm9::chr10:85390145..85390153,+#_a864da2db5f3afbc8f42cb20d942e524p@chr10:85390145..85390153, +
3.28e-58FFCP PHASE1:Mm9::chr13:21379107..21379136,+#_a864da2db5f3afbc8f42cb20d942e524p@chr13:21379107..21379136, +
3.28e-58FFCP PHASE1:Mm9::chr2:172632171..172632178,-#_a864da2db5f3afbc8f42cb20d942e524p@chr2:172632171..172632178, -
3.28e-58FFCP PHASE2:Mm9::chr13:21379430..21379437,-#_a864da2db5f3afbc8f42cb20d942e524p@chr13:21379430..21379437, -
3.28e-58FFCP PHASE2:Mm9::chr7:151927980..151927988,+#_a864da2db5f3afbc8f42cb20d942e524p@chr7:151927980..151927988, +
3.28e-58FFCP PHASE1:Mm9::chr11:101959194..101959224,-#_a864da2db5f3afbc8f42cb20d942e524p@chr11:101959194..101959224, -
3.28e-58FFCP PHASE2:Mm9::chr12:103896072..103896081,-#_a864da2db5f3afbc8f42cb20d942e524p@chr12:103896072..103896081, -
3.28e-58FFCP PHASE1:Mm9::chr1:90155707..90155720,+#_a864da2db5f3afbc8f42cb20d942e524p@chr1:90155707..90155720, +
3.28e-58FFCP PHASE2:Mm9::chr15:75304900..75304907,+#_a864da2db5f3afbc8f42cb20d942e524p@chr15:75304900..75304907, +
3.28e-58FFCP PHASE2:Mm9::chr9:26785438..26785446,-#_a864da2db5f3afbc8f42cb20d942e524p3@Acad8
3.28e-58FFCP PHASE2:Mm9::chr2:164464249..164464258,-#_a864da2db5f3afbc8f42cb20d942e524p@chr2:164464249..164464258, -
3.28e-58FFCP PHASE2:Mm9::chr2:158083961..158083968,+#_a864da2db5f3afbc8f42cb20d942e524p4@Bpi
3.28e-58FFCP PHASE2:Mm9::chr8:19141482..19141496,+#_a864da2db5f3afbc8f42cb20d942e524p@chr8:19141482..19141496, +
3.28e-58FFCP PHASE2:Mm9::chr10:91753336..91753348,-#_a864da2db5f3afbc8f42cb20d942e524p@chr10:91753336..91753348, -
3.28e-58FFCP PHASE1:Mm9::chr4:134913640..134913649,+#_a864da2db5f3afbc8f42cb20d942e524p@chr4:134913640..134913649, +
3.28e-58FFCP PHASE2:Mm9::chr1:90368977..90368987,+#_a864da2db5f3afbc8f42cb20d942e524p@chr1:90368977..90368987, +
3.28e-58FFCP PHASE1:Mm9::chr14:51670340..51670346,-#_a864da2db5f3afbc8f42cb20d942e524p@chr14:51670340..51670346, -
3.28e-58FFCP PHASE1:Mm9::chr7:109379335..109379338,+#_a864da2db5f3afbc8f42cb20d942e524p21@Pgap2
3.28e-58FFCP PHASE1:Mm9::chr2:148676919..148676930,-#_a864da2db5f3afbc8f42cb20d942e524p3@9230104L09Rik
3.28e-58FFCP PHASE1:Mm9::chr1:87936213..87936218,+#_a864da2db5f3afbc8f42cb20d942e524p@chr1:87936213..87936218, +
3.28e-58FFCP PHASE2:Mm9::chr9:26719400..26719404,-#_a864da2db5f3afbc8f42cb20d942e524p@chr9:26719400..26719404, -
3.28e-58FFCP PHASE2:Mm9::chr14:52542831..52542836,-#_a864da2db5f3afbc8f42cb20d942e524p4@Rnase13
3.28e-58FFCP PHASE1:Mm9::chr8:19142604..19142612,+#_a864da2db5f3afbc8f42cb20d942e524p@chr8:19142604..19142612, +
3.28e-58FFCP PHASE2:Mm9::chrX:156829476..156829504,+#_a864da2db5f3afbc8f42cb20d942e524p@chrX:156829476..156829504, +
3.28e-58FFCP PHASE2:Mm9::chr18:62775330..62775347,-#_a864da2db5f3afbc8f42cb20d942e524p@chr18:62775330..62775347, -
3.28e-58FFCP PHASE1:Mm9::chr13:21378296..21378303,+#_a864da2db5f3afbc8f42cb20d942e524p@chr13:21378296..21378303, +
3.28e-58FFCP PHASE2:Mm9::chr5:35930706..35930717,+#_a864da2db5f3afbc8f42cb20d942e524p@chr5:35930706..35930717, +
3.28e-58FFCP PHASE1:Mm9::chrX:164787162..164787188,-#_a864da2db5f3afbc8f42cb20d942e524p@chrX:164787162..164787188, -
3.28e-58FFCP PHASE1:Mm9::chr5:31379437..31379448,+#_a864da2db5f3afbc8f42cb20d942e524p@chr5:31379437..31379448, +
3.28e-58FFCP PHASE1:Mm9::chr17:24670830..24670845,+#_a864da2db5f3afbc8f42cb20d942e524p@chr17:24670830..24670845, +
3.28e-58FFCP PHASE1:Mm9::chr15:75304900..75304907,+#_a864da2db5f3afbc8f42cb20d942e524p@chr15:75304900..75304907, +
3.28e-58FFCP PHASE1:Mm9::chr10:85390145..85390153,+#_a864da2db5f3afbc8f42cb20d942e524p@chr10:85390145..85390153, +
3.28e-58FFCP PHASE2:Mm9::chr1:87922778..87922788,+#_a864da2db5f3afbc8f42cb20d942e524p@chr1:87922778..87922788, +
3.28e-58FFCP PHASE1:Mm9::chr1:39707572..39707583,+#_a864da2db5f3afbc8f42cb20d942e524p@chr1:39707572..39707583, +
3.28e-58FFCP PHASE2:Mm9::chr7:65995799..65995810,-#_a864da2db5f3afbc8f42cb20d942e524p@chr7:65995799..65995810, -
3.28e-58FFCP PHASE1:Mm9::chr13:21380610..21380620,-#_a864da2db5f3afbc8f42cb20d942e524p@chr13:21380610..21380620, -
3.28e-58FFCP PHASE2:Mm9::chr11:98567868..98567884,-#_a864da2db5f3afbc8f42cb20d942e524p5@Med24
3.28e-58FFCP PHASE2:Mm9::chrX:130496166..130496188,-#_a864da2db5f3afbc8f42cb20d942e524p@chrX:130496166..130496188, -
3.28e-58FFCP PHASE1:Mm9::chr12:104945515..104945524,-#_a864da2db5f3afbc8f42cb20d942e524p@chr12:104945515..104945524, -
3.28e-58FFCP PHASE2:Mm9::chr14:63611214..63611229,+#_a864da2db5f3afbc8f42cb20d942e524p@chr14:63611214..63611229, +
3.28e-58FFCP PHASE2:Mm9::chr5:31379845..31379855,+#_a864da2db5f3afbc8f42cb20d942e524p@chr5:31379845..31379855, +
3.28e-58FFCP PHASE1:Mm9::chrX:130496260..130496269,-#_a864da2db5f3afbc8f42cb20d942e524p@chrX:130496260..130496269, -
3.28e-58FFCP PHASE1:Mm9::chr9:26785438..26785446,-#_a864da2db5f3afbc8f42cb20d942e524p3@Acad8

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0000083&oldid=1832421"