CAGE Basic Viewer  CAGE Basic Viewer   for  Mus musculus
Sunday, 1 August 2021 
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Browse by Tissue Type
# A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
U : Tags Mapped tags (rate) No-hits (rate) Multi-hits (rate) CTSSs TCs TUs  TOP
UNDEFINED_TISSUE_TYPE 483,344 255,600 (53%) 162,164 (34%) 65,580 (14%) 96,833 46,909 19,461
A : Tags Mapped tags (rate) No-hits (rate) Multi-hits (rate) CTSSs TCs TUs  TOP
adipose 421,907 237,434 (56%) 129,854 (31%) 54,619 (13%) 104,641 47,020 19,166
amnion 5,005 381 ( 8%) 4,528 (90%) 96 ( 2%) 216 203 202
B : Tags Mapped tags (rate) No-hits (rate) Multi-hits (rate) CTSSs TCs TUs  TOP
brain 330,964 122,603 (37%) 163,737 (49%) 44,624 (13%) 46,809 22,415 13,766
C : Tags Mapped tags (rate) No-hits (rate) Multi-hits (rate) CTSSs TCs TUs  TOP
cerebellum 343,606 211,541 (62%) 94,927 (28%) 37,138 (11%) 114,558 49,873 18,753
cerebral cortex 40,884 17,510 (43%) 17,733 (43%) 5,641 (14%) 10,205 6,486 5,384
D : Tags Mapped tags (rate) No-hits (rate) Multi-hits (rate) CTSSs TCs TUs  TOP
diencephalon 85,519 43,044 (50%) 30,574 (36%) 11,901 (14%) 13,585 8,324 6,567
E : Tags Mapped tags (rate) No-hits (rate) Multi-hits (rate) CTSSs TCs TUs  TOP
embryo 1,748,856 1,077,740 (62%) 327,797 (19%) 343,319 (20%) 265,253 107,655 26,460
eye 7,655 1,246 (16%) 6,083 (79%) 326 ( 4%) 990 872 852
H : Tags Mapped tags (rate) No-hits (rate) Multi-hits (rate) CTSSs TCs TUs  TOP
heart 47,458 34,743 (73%) 5,919 (12%) 6,796 (14%) 21,090 12,564 8,423
hippocampus 5,475 2,728 (50%) 1,830 (33%) 917 (17%) 1,892 1,511 1,425
L : Tags Mapped tags (rate) No-hits (rate) Multi-hits (rate) CTSSs TCs TUs  TOP
liver 3,360,358 2,130,614 (63%) 723,650 (22%) 506,094 (15%) 425,646 181,866 30,721
lung 1,835,646 1,129,877 (62%) 462,653 (25%) 243,116 (13%) 345,011 170,564 30,560
M : Tags Mapped tags (rate) No-hits (rate) Multi-hits (rate) CTSSs TCs TUs  TOP
macrophage 1,808,938 1,231,138 (68%) 346,470 (19%) 231,330 (13%) 280,937 121,072 26,746
mammary gland 38,228 1,294 ( 3%) 36,776 (96%) 158 ( 0%) 724 678 671
medulla oblongata 15,126 3,193 (21%) 11,162 (74%) 771 ( 5%) 2,531 2,092 1,937
muscle 54,914 42,294 (77%) 5,453 (10%) 7,167 (13%) 24,206 14,096 8,829
P : Tags Mapped tags (rate) No-hits (rate) Multi-hits (rate) CTSSs TCs TUs  TOP
placenta 4,933 249 ( 5%) 4,631 (94%) 53 ( 1%) 202 200 199
prostate gland 82,274 57,057 (69%) 8,430 (10%) 16,787 (20%) 32,691 20,195 10,795
S : Tags Mapped tags (rate) No-hits (rate) Multi-hits (rate) CTSSs TCs TUs  TOP
somatosensory cortex 253,904 190,762 (75%) 34,297 (14%) 28,845 (11%) 105,865 46,525 17,193
striatal primordia 104,839 39,693 (38%) 52,126 (50%) 13,020 (12%) 16,509 8,623 6,614
T : Tags Mapped tags (rate) No-hits (rate) Multi-hits (rate) CTSSs TCs TUs  TOP
testis 203,638 109,150 (54%) 71,566 (35%) 22,922 (11%) 53,668 24,262 13,347
V : Tags Mapped tags (rate) No-hits (rate) Multi-hits (rate) CTSSs TCs TUs  TOP
visual cortex 284,502 211,620 (74%) 40,441 (14%) 32,441 (11%) 113,052 48,386 17,216
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