CAGE Basic Viewer  CAGE Basic Viewer   for  Mus musculus
Thursday, 25 April 2024 
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Tissue Summary
Tissue Name : brain
Tissue ID EMAP ID Tags Mapped
tags (rate)
Unmapped tags CTSSs TCs TUs
No hit (rate) Multiple (rate)
27 2229 330,964 122,603 (37%) 163,737 (49%) 44,624 (13%) 46,809 22,415 13,766
RNA Libraries
RNA Lib. ID Tissue Type Stage Tags Mapped
tags (rate)
CTSSs TCs TUs
AU brain  TS-21 (Anterior footplate indented) 1,825 669 (37%)598 555 546
AW brain  TS-23 (Fingers & Toes separate) 5,343 1,276 (24%)1,122 992 968
CFO brain  -1 (N/A.) 133,896 53,265 (40%)21,493 11,269 8,335
CFP brain  -1 (N/A.) 92,795 36,979 (40%)14,943 8,214 6,603
CFQ brain  -1 (N/A.) 27,642 10,897 (39%)6,204 4,191 3,690
CGC brain  -1 (N/A.) 6,734 3,446 (51%)2,417 1,873 1,762
DO brain  TS-22 (Fingers separate distally) 3,511 1,105 (31%)852 768 759
II brain  TS-20 (Earliest sign of fingers) 14,844 1,406 (9%)1,229 1,098 1,063
IJ brain  TS-24 (Reposition of umbilical hernia) 19,033 2,102 (11%)1,751 1,517 1,449
IO brain  TS-28 (Postnatal development) 25,341 11,458 (45%)7,036 4,772 4,135
Detail of Summary in : » chr_no  
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