Personal tools

CL:0000049

From FANTOM5_SSTAR

Jump to: navigation, search
Name:common myeloid progenitor
Namespace:FANTOM
Definition:"A progenitor cell committed to myeloid lineage, including the megakaryocyte and erythroid lineages. These cells are CD34-positive, and express Gata-1, Gata2, C/EBPa, and Pu.1." [GOC:add, GOC:dsd, GOC:tfm, ISBN:0878932437, MESH:D023461, PMCID:PMC2212039, PMID:10724173, PMID:16551251]
Synonyms: "cfu-gemm" RELATED [ISBN:0878932437]
"CFU-S" RELATED [ISBN:0878932437]
"CMP" EXACT [ISBN:0878932437]
"colony forming unit granulocyte, erythrocyte, macrophage, and megakaryocyte" RELATED [ISBN:0878932437]
"common myeloid precursor" EXACT []
"multipotential myeloid stem cell" RELATED [ISBN:0878932437]
"myeloid stem cell" RELATED [ISBN:0878932437]
"pluripotent stem cell (bone marrow)" RELATED [ISBN:0878932437]
Comments:CMP are reportedly CD38-positive, CD45RA-negative, and CD123-positive.


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data

Parents

is_a:CL:0002032(hematopoietic oligopotent progenitor cell)
disjoint_from:CL:0000050(megakaryocyte-erythroid progenitor cell),CL:0000051(common lymphoid progenitor),CL:0000557(granulocyte monocyte progenitor cell)



Children


derives from:FF:0000041 (common myeloid progenitor sample)
develops from:CL:0000050 (megakaryocyte-erythroid progenitor cell),CL:0000557 (granulocyte monocyte progenitor cell),CL:0000763 (myeloid cell),CL:0000766 (myeloid leukocyte)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000049 (common myeloid progenitor), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data

P-valueFFCPShort description
5.01e-115FFCP PHASE1:Hg19::chr11:47399920..47399931,-#_ff91f69b80faddf40a72d418d9d734eep7@SPI1
5.01e-115FFCP PHASE2:Hg19::chr11:47399920..47399931,-#_ff91f69b80faddf40a72d418d9d734eep7@SPI1
6.88e-112FFCP PHASE2:Hg19::chr11:47400045..47400060,-#_b166924bb2708eb64809f70108a53ff6p6@SPI1
6.88e-112FFCP PHASE1:Hg19::chr11:47400045..47400060,-#_b166924bb2708eb64809f70108a53ff6p6@SPI1
1.87e-103FFCP PHASE2:Hg19::chr8:55074639..55074655,+#_1aaa639b43f39dce40f2491b419ff92ap@chr8:55074639..55074655, +
1.87e-103FFCP PHASE1:Hg19::chr8:55074639..55074655,+#_1aaa639b43f39dce40f2491b419ff92ap@chr8:55074639..55074655, +
5.28e-102FFCP PHASE1:Hg19::chr2:109204876..109204889,+#_819a6d242b10279ffe482258ace6a4dep7@LIMS1
5.28e-102FFCP PHASE2:Hg19::chr2:109204876..109204889,+#_819a6d242b10279ffe482258ace6a4dep7@LIMS1
3.01e-101FFCP PHASE2:Hg19::chr19:54876689..54876707,-#_9f6008e81733936df6eae75167c16e5ap6@LAIR1
3.01e-101FFCP PHASE1:Hg19::chr19:54876689..54876707,-#_9f6008e81733936df6eae75167c16e5ap6@LAIR1
2.92e-100FFCP PHASE1:Hg19::chr17:72528538..72528554,+#_9fa64b1836d74fc90c49be3d8e67787dp@chr17:72528538..72528554, +
2.92e-100FFCP PHASE2:Hg19::chr17:72528538..72528554,+#_9fa64b1836d74fc90c49be3d8e67787dp@chr17:72528538..72528554, +
1.71e-99FFCP PHASE1:Hg19::chr11:47400032..47400043,-#_af45ee27a78c925df11cb84f0c24aaeep5@SPI1
1.71e-99FFCP PHASE2:Hg19::chr11:47400032..47400043,-#_af45ee27a78c925df11cb84f0c24aaeep5@SPI1
3.09e-99FFCP PHASE2:Hg19::chr6:137105174..137105195,+#_3482a2c63c5d8544b35169c61c018282p@chr6:137105174..137105195, +
3.09e-99FFCP PHASE1:Hg19::chr6:137105174..137105195,+#_3482a2c63c5d8544b35169c61c018282p@chr6:137105174..137105195, +
3.6e-99FFCP PHASE1:Hg19::chr19:55084438..55084495,+#_abb6ab241e216fff5d2650b235745aa5p2@LILRA2
3.6e-99FFCP PHASE2:Hg19::chr19:55084438..55084495,+#_abb6ab241e216fff5d2650b235745aa5p2@LILRA2
5.23e-99FFCP PHASE2:Hg19::chr12:118796868..118796885,-#_67603e375b75dbd9c5fa3b7b80f90509p6@TAOK3
5.23e-99FFCP PHASE1:Hg19::chr12:118796868..118796885,-#_67603e375b75dbd9c5fa3b7b80f90509p6@TAOK3
2.14e-98FFCP PHASE1:Hg19::chr18:2847062..2847071,+#_7c02bd86410cc8960ada083d58df4976p7@EMILIN2
2.14e-98FFCP PHASE2:Hg19::chr18:2847062..2847071,+#_7c02bd86410cc8960ada083d58df4976p7@EMILIN2
2.31e-97FFCP PHASE1:Hg19::chr15:65174546..65174583,-#_50a164d97b97576a171afabd1e32db33p@chr15:65174546..65174583, -
2.31e-97FFCP PHASE2:Hg19::chr15:65174546..65174583,-#_50a164d97b97576a171afabd1e32db33p@chr15:65174546..65174583, -
4.87e-97FFCP PHASE2:Hg19::chr20:35202667..35202682,+#_5bb00fbfdad797f66bdf9648a196668ap4@C20orf24
4.87e-97FFCP PHASE1:Hg19::chr20:35202667..35202682,+#_5bb00fbfdad797f66bdf9648a196668ap4@C20orf24
1.04e-96FFCP PHASE2:Hg19::chr13:108922429..108922446,+#_d5ccc8537118e0ab09dc79401ebf4a57p6@TNFSF13B
1.04e-96FFCP PHASE1:Hg19::chr13:108922429..108922446,+#_d5ccc8537118e0ab09dc79401ebf4a57p6@TNFSF13B
1.68e-96FFCP PHASE1:Hg19::chr11:47399947..47399961,-#_f78ceee86c1622760e6350ae45b711cap3@SPI1
1.68e-96FFCP PHASE2:Hg19::chr11:47399947..47399961,-#_f78ceee86c1622760e6350ae45b711cap3@SPI1
3.76e-96FFCP PHASE2:Hg19::chr17:72709134..72709145,-#_c71d0bddb4cb17b2a162481174cc59f4p2@CD300LF
3.76e-96FFCP PHASE1:Hg19::chr17:72709134..72709145,-#_c71d0bddb4cb17b2a162481174cc59f4p2@CD300LF
6.69e-96FFCP PHASE1:Hg19::chr19:36400209..36400286,-#_f831fb44455df1488bf3f582893c40d1p@chr19:36400209..36400286, -
6.69e-96FFCP PHASE2:Hg19::chr19:36400209..36400286,-#_f831fb44455df1488bf3f582893c40d1p@chr19:36400209..36400286, -
7.75e-96FFCP PHASE2:Hg19::chr11:70161074..70161080,-#_eef6a0c70f85208f39092b065d43c48ep@chr11:70161074..70161080, -
7.75e-96FFCP PHASE1:Hg19::chr11:70161074..70161080,-#_eef6a0c70f85208f39092b065d43c48ep@chr11:70161074..70161080, -
7.57e-95FFCP PHASE1:Hg19::chr2:109204909..109204928,+#_81abc69b3f1f31b9556e9f965855f93fp3@LIMS1
7.57e-95FFCP PHASE2:Hg19::chr2:109204909..109204928,+#_81abc69b3f1f31b9556e9f965855f93fp3@LIMS1
1.23e-94FFCP PHASE2:Hg19::chr6:36665587..36665612,+#_b608be6e801b88228ed4f8795401b8ebp1@uc010jwl.1
1.23e-94FFCP PHASE1:Hg19::chr6:36665587..36665612,+#_b608be6e801b88228ed4f8795401b8ebp1@uc010jwl.1
4.83e-94FFCP PHASE1:Hg19::chr22:46998103..46998127,-#_5ebe20ccb7ebcdd3caebf5435894e827p@chr22:46998103..46998127, -
4.83e-94FFCP PHASE2:Hg19::chr22:46998103..46998127,-#_5ebe20ccb7ebcdd3caebf5435894e827p@chr22:46998103..46998127, -
6.81e-94FFCP PHASE1:Hg19::chr5:57787254..57787271,+#_7b14e423478a122547e34f55a1bc06bep2@GAPT
6.81e-94FFCP PHASE2:Hg19::chr5:57787254..57787271,+#_7b14e423478a122547e34f55a1bc06bep2@GAPT
2.22e-93FFCP PHASE2:Hg19::chr6:31583632..31583651,+#_a97a7a02049a0e1902d60e4faa9f567bp5@AIF1
2.22e-93FFCP PHASE1:Hg19::chr6:31583632..31583651,+#_a97a7a02049a0e1902d60e4faa9f567bp5@AIF1
6.0e-93FFCP PHASE1:Hg19::chr16:50313426..50313459,+#_1cc73dca6693892dcd653bf303855aa2p@chr16:50313426..50313459, +
6.0e-93FFCP PHASE2:Hg19::chr16:50313426..50313459,+#_1cc73dca6693892dcd653bf303855aa2p@chr16:50313426..50313459, +
7.03e-93FFCP PHASE2:Hg19::chr11:47399996..47400014,-#_a8efabdefd98260c3cdd23affc67d900p4@SPI1
7.03e-93FFCP PHASE1:Hg19::chr11:47399996..47400014,-#_a8efabdefd98260c3cdd23affc67d900p4@SPI1
9.92e-93FFCP PHASE1:Hg19::chr17:4642716..4642727,-#_474a199f0e3212d66f1383b0ec19ada8p7@CXCL16
9.92e-93FFCP PHASE2:Hg19::chr17:4642716..4642727,-#_474a199f0e3212d66f1383b0ec19ada8p7@CXCL16
1.41e-92FFCP PHASE2:Hg19::chr3:98482159..98482172,+#_55fe533bf4b903fa1502293556a7be94p5@ST3GAL6
1.41e-92FFCP PHASE1:Hg19::chr3:98482159..98482172,+#_55fe533bf4b903fa1502293556a7be94p5@ST3GAL6
1.63e-92FFCP PHASE1:Hg19::chr6:137105206..137105220,+#_4b9a3102c375d0de25b54e8f896ede32p@chr6:137105206..137105220, +
1.63e-92FFCP PHASE2:Hg19::chr6:137105206..137105220,+#_4b9a3102c375d0de25b54e8f896ede32p@chr6:137105206..137105220, +
2.56e-92FFCP PHASE1:Hg19::chr13:108922478..108922493,+#_d29a143ad6df6c2dbb87df043bfcb15dp5@TNFSF13B
2.56e-92FFCP PHASE2:Hg19::chr13:108922478..108922493,+#_d29a143ad6df6c2dbb87df043bfcb15dp5@TNFSF13B
6.37e-92FFCP PHASE1:Hg19::chr22:37257098..37257115,+#_ad20e568cbb4a19f7e08f45503cdbdf0p3@NCF4
6.37e-92FFCP PHASE2:Hg19::chr22:37257098..37257115,+#_ad20e568cbb4a19f7e08f45503cdbdf0p3@NCF4
7.64e-92FFCP PHASE1:Hg19::chr19:36398154..36398173,-#_e76d86c2e49def309b276313a3a70c7dp@chr19:36398154..36398173, -
7.64e-92FFCP PHASE2:Hg19::chr19:36398154..36398173,-#_e76d86c2e49def309b276313a3a70c7dp@chr19:36398154..36398173, -
1.22e-91FFCP PHASE2:Hg19::chr7:2832730..2832791,+#_b616d7edcb62cfbfd11b1d28b876e9b5p@chr7:2832730..2832791, +
1.22e-91FFCP PHASE1:Hg19::chr7:2832730..2832791,+#_b616d7edcb62cfbfd11b1d28b876e9b5+, p@chr7:2832730..2832791
2.01e-91FFCP PHASE2:Hg19::chr17:9923211..9923249,-#_fb0e4c54e2e46764aea3310e6cacdb89p10@GAS7
2.01e-91FFCP PHASE1:Hg19::chr17:9923211..9923249,-#_fb0e4c54e2e46764aea3310e6cacdb89p10@GAS7
4.57e-91FFCP PHASE2:Hg19::chr5:176936817..176936841,-#_d5348db828f6813c8ef605bda471fd7fp2@DOK3
4.57e-91FFCP PHASE1:Hg19::chr5:176936817..176936841,-#_d5348db828f6813c8ef605bda471fd7fp2@DOK3
1.8e-90FFCP PHASE1:Hg19::chr22:37257002..37257013,+#_3e77a1d8cbc1375069f5f8ea7547e424p4@NCF4
1.8e-90FFCP PHASE2:Hg19::chr22:37257002..37257013,+#_3e77a1d8cbc1375069f5f8ea7547e424p4@NCF4
2.43e-90FFCP PHASE1:Hg19::chr19:18286116..18286156,+#_7815d7c2e39a54a31b6db622dfbc8776p@chr19:18286116..18286156, +
2.43e-90FFCP PHASE2:Hg19::chr19:18286116..18286156,+#_7815d7c2e39a54a31b6db622dfbc8776p@chr19:18286116..18286156, +
3.13e-90FFCP PHASE2:Hg19::chr1:161188661..161188679,+#_7dca599d70c41e2441fc1e939159c681p@chr1:161188661..161188679, +
3.13e-90FFCP PHASE1:Hg19::chr1:161188661..161188679,+#_7dca599d70c41e2441fc1e939159c681p@chr1:161188661..161188679, +
9.35e-90FFCP PHASE1:Hg19::chr6:31554766..31554777,+#_94eb06ec747184c56e7dc7505bc6a511p8@LST1
9.35e-90FFCP PHASE2:Hg19::chr6:31554766..31554777,+#_94eb06ec747184c56e7dc7505bc6a511p8@LST1
9.81e-90FFCP PHASE2:Hg19::chr17:6916789..6916808,+#_6a8bf50d8670c7c63c59f22aac823552p10@C17orf49
9.81e-90FFCP PHASE1:Hg19::chr17:6916789..6916808,+#_6a8bf50d8670c7c63c59f22aac823552p10@C17orf49
1.04e-89FFCP PHASE1:Hg19::chr14:103587759..103587770,+#_e5caa461a0cac533e5679411e3953994p@chr14:103587759..103587770, +
1.04e-89FFCP PHASE2:Hg19::chr14:103587759..103587770,+#_e5caa461a0cac533e5679411e3953994p@chr14:103587759..103587770, +
2.62e-89FFCP PHASE1:Hg19::chr19:51714319..51714374,+#_18d43a20622fac8d6a2abd423ba9fe55p@chr19:51714319..51714374, +
2.62e-89FFCP PHASE2:Hg19::chr19:51714319..51714374,+#_18d43a20622fac8d6a2abd423ba9fe55p@chr19:51714319..51714374, +
4.84e-89FFCP PHASE2:Hg19::chr6:137105237..137105263,+#_e34872376821a1eb6cef179d4a049d52p@chr6:137105237..137105263, +
4.84e-89FFCP PHASE1:Hg19::chr6:137105237..137105263,+#_e34872376821a1eb6cef179d4a049d52p@chr6:137105237..137105263, +
4.9e-89FFCP PHASE1:Hg19::chr5:176936844..176936870,-#_80bf5ff7cedadd82ab6d23ef3cc3569cp3@DOK3
4.9e-89FFCP PHASE2:Hg19::chr5:176936844..176936870,-#_80bf5ff7cedadd82ab6d23ef3cc3569cp3@DOK3
7.3e-89FFCP PHASE2:Hg19::chr22:32034409..32034470,-#_7d06bc3b9ba53d55a080a157a50a6e6ep4@PISD
7.3e-89FFCP PHASE1:Hg19::chr22:32034409..32034470,-#_7d06bc3b9ba53d55a080a157a50a6e6ep4@PISD
8.29e-89FFCP PHASE2:Hg19::chr1:161039459..161039478,-#_e3c66d369948d842e941c3ff4071a774p4@ARHGAP30
8.29e-89FFCP PHASE1:Hg19::chr1:161039459..161039478,-#_e3c66d369948d842e941c3ff4071a774p4@ARHGAP30
9.58e-89FFCP PHASE1:Hg19::chr1:161475228..161475239,+#_844734e02afa9411b245a643fd5a029dp3@FCGR2A
9.58e-89FFCP PHASE2:Hg19::chr1:161475228..161475239,+#_844734e02afa9411b245a643fd5a029dp3@FCGR2A
1.26e-88FFCP PHASE2:Hg19::chr18:5466317..5466374,-#_aaef8446aadaa0689253acae7fd02239p@chr18:5466317..5466374, -
1.26e-88FFCP PHASE1:Hg19::chr18:5466317..5466374,-#_aaef8446aadaa0689253acae7fd02239p@chr18:5466317..5466374, -
1.34e-88FFCP PHASE1:Hg19::chr16:8738211..8738249,+#_45b772e189991236f5b2dc43b2f01304p@chr16:8738211..8738249, +
1.34e-88FFCP PHASE2:Hg19::chr16:8738211..8738249,+#_45b772e189991236f5b2dc43b2f01304p@chr16:8738211..8738249, +
2.3e-88FFCP PHASE2:Hg19::chr19:18285955..18285972,+#_f26640c6fc84b8e62b664d90cb65d940p@chr19:18285955..18285972, +
2.3e-88FFCP PHASE1:Hg19::chr19:18285955..18285972,+#_f26640c6fc84b8e62b664d90cb65d940p@chr19:18285955..18285972, +
3.13e-88FFCP PHASE1:Hg19::chr1:28211791..28211853,+#_951ca276c82ad32910ebaa613359df18p@chr1:28211791..28211853, +
3.13e-88FFCP PHASE2:Hg19::chr1:28211791..28211853,+#_951ca276c82ad32910ebaa613359df18p@chr1:28211791..28211853, +

Retrieved from "http://f5-webapp2.gsc.riken.jp/5/sstar/index.php?title=CL:0000049&oldid=3275166"