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CL:0000763

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Name:myeloid cell
Namespace:FANTOM
Definition:"A cell of the monocyte, granulocyte, mast cell, megakaryocyte, or erythroid lineage." [GOC:add]
Xrefs:
links:
BTO:0001441


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data

Parents

is_a:CL:0000988(hematopoietic cell)
develops_from:CL:0000049(common myeloid progenitor)



Children


is a:CL:0000040 (monoblast),CL:0000050 (megakaryocyte-erythroid progenitor cell),CL:0000553 (megakaryocyte progenitor cell),CL:0000556 (megakaryocyte),CL:0000557 (granulocyte monocyte progenitor cell),CL:0000559 (promonocyte),CL:0000764 (erythroid lineage cell),CL:0000766 (myeloid leukocyte),CL:0000831 (mast cell progenitor),CL:0000835 (myeloblast),CL:0000836 (promyelocyte),CL:0001029 (common dendritic progenitor),CL:0002009 (macrophage dendritic cell progenitor),CL:0002028 (basophil mast progenitor cell),CL:0002193 (myelocyte)
derives from:FF:0100740 (myeloid leukemia cell line sample)
develops from:CL:0000453 (Langerhans cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

  • 10399-106A3 (acute myeloid leukemia (FAB M5) cell line:THP-1 (fresh))
  • 10400-106A4 (acute myeloid leukemia (FAB M5) cell line:THP-1 (revived))
  • 10405-106A9 (acute myeloid leukemia (FAB M5) cell line:THP-1 (thawed))
  • 10409-106B4 (chronic myelogenous leukemia cell line:KU812)
  • 10454-106G4 (chronic myelogenous leukemia cell line:K562)
  • 10699-109G6 (acute myeloid leukemia (FAB M7) cell line:M-MOK)
  • 10704-109H2 (osteoclastoma cell line:Hs 706.T)
  • 10711-109H9 (fibrous histiocytoma cell line:GCT TIB-223)
  • 10718-109I7 (biphenotypic B myelomonocytic leukemia cell line:MV-4-11)
  • 10731-110B2

... further results Mouse (Mus musculus)

  • 10399-106A3 (acute myeloid leukemia (FAB M5) cell line:THP-1 (fresh))
  • 10400-106A4 (acute myeloid leukemia (FAB M5) cell line:THP-1 (revived))
  • 10405-106A9 (acute myeloid leukemia (FAB M5) cell line:THP-1 (thawed))
  • 10409-106B4 (chronic myelogenous leukemia cell line:KU812)
  • 10454-106G4 (chronic myelogenous leukemia cell line:K562)
  • 10699-109G6 (acute myeloid leukemia (FAB M7) cell line:M-MOK)
  • 10704-109H2 (osteoclastoma cell line:Hs 706.T)
  • 10711-109H9 (fibrous histiocytoma cell line:GCT TIB-223)
  • 10718-109I7 (biphenotypic B myelomonocytic leukemia cell line:MV-4-11)
  • 10731-110B2

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000763 (myeloid cell), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data

P-valueFFCPShort description
5.01e-115FFCP PHASE1:Hg19::chr11:47399920..47399931,-#_3032f4ab69c1699984e81500f0a91621p7@SPI1
5.01e-115FFCP PHASE2:Hg19::chr11:47399920..47399931,-#_3032f4ab69c1699984e81500f0a91621p7@SPI1
6.88e-112FFCP PHASE2:Hg19::chr11:47400045..47400060,-#_dda8c0334841f3908ac6e79aacc144ebp6@SPI1
6.88e-112FFCP PHASE1:Hg19::chr11:47400045..47400060,-#_dda8c0334841f3908ac6e79aacc144ebp6@SPI1
1.87e-103FFCP PHASE2:Hg19::chr8:55074639..55074655,+#_f046fa7bfd5a00d7c3b620a5a33dda5cp@chr8:55074639..55074655, +
1.87e-103FFCP PHASE1:Hg19::chr8:55074639..55074655,+#_f046fa7bfd5a00d7c3b620a5a33dda5cp@chr8:55074639..55074655, +
5.28e-102FFCP PHASE1:Hg19::chr2:109204876..109204889,+#_a1408ce8b82422947413d52f4d4d0d72p7@LIMS1
5.28e-102FFCP PHASE2:Hg19::chr2:109204876..109204889,+#_a1408ce8b82422947413d52f4d4d0d72p7@LIMS1
3.01e-101FFCP PHASE1:Hg19::chr19:54876689..54876707,-#_8e7835a68cea65df22c87de6b0d3ed51p6@LAIR1
3.01e-101FFCP PHASE2:Hg19::chr19:54876689..54876707,-#_8e7835a68cea65df22c87de6b0d3ed51p6@LAIR1
2.92e-100FFCP PHASE2:Hg19::chr17:72528538..72528554,+#_1b693b8a8d37cf2b94c5252f1bee2044p@chr17:72528538..72528554, +
2.92e-100FFCP PHASE1:Hg19::chr17:72528538..72528554,+#_1b693b8a8d37cf2b94c5252f1bee2044p@chr17:72528538..72528554, +
1.71e-99FFCP PHASE1:Hg19::chr11:47400032..47400043,-#_d6742f54535a4069346d0843a03751efp5@SPI1
1.71e-99FFCP PHASE2:Hg19::chr11:47400032..47400043,-#_d6742f54535a4069346d0843a03751efp5@SPI1
3.09e-99FFCP PHASE1:Hg19::chr6:137105174..137105195,+#_45d2cf136ecb1d6cffeb5937035c9f34p@chr6:137105174..137105195, +
3.09e-99FFCP PHASE2:Hg19::chr6:137105174..137105195,+#_45d2cf136ecb1d6cffeb5937035c9f34p@chr6:137105174..137105195, +
3.6e-99FFCP PHASE2:Hg19::chr19:55084438..55084495,+#_6a56fe2896c84a4c4494d8df30134f78p2@LILRA2
3.6e-99FFCP PHASE1:Hg19::chr19:55084438..55084495,+#_6a56fe2896c84a4c4494d8df30134f78p2@LILRA2
5.23e-99FFCP PHASE1:Hg19::chr12:118796868..118796885,-#_341d50233bcb76e3d23a02891291e4cap6@TAOK3
5.23e-99FFCP PHASE2:Hg19::chr12:118796868..118796885,-#_341d50233bcb76e3d23a02891291e4cap6@TAOK3
2.14e-98FFCP PHASE2:Hg19::chr18:2847062..2847071,+#_c2791c8b2bdf9cb89fc6d39c594cfbdap7@EMILIN2
2.14e-98FFCP PHASE1:Hg19::chr18:2847062..2847071,+#_c2791c8b2bdf9cb89fc6d39c594cfbdap7@EMILIN2
2.31e-97FFCP PHASE1:Hg19::chr15:65174546..65174583,-#_0427e415d4d48dff7268cc808ba91e71p@chr15:65174546..65174583, -
2.31e-97FFCP PHASE2:Hg19::chr15:65174546..65174583,-#_0427e415d4d48dff7268cc808ba91e71p@chr15:65174546..65174583, -
4.87e-97FFCP PHASE2:Hg19::chr20:35202667..35202682,+#_2f6973755ecd04aa4af228f7e2e089bap4@C20orf24
4.87e-97FFCP PHASE1:Hg19::chr20:35202667..35202682,+#_2f6973755ecd04aa4af228f7e2e089bap4@C20orf24
1.04e-96FFCP PHASE1:Hg19::chr13:108922429..108922446,+#_78181d48d73a4e2f1a998e6436b8380bp6@TNFSF13B
1.04e-96FFCP PHASE2:Hg19::chr13:108922429..108922446,+#_78181d48d73a4e2f1a998e6436b8380bp6@TNFSF13B
1.68e-96FFCP PHASE1:Hg19::chr11:47399947..47399961,-#_7583cd17241380d7a7d2488a62294d95p3@SPI1
1.68e-96FFCP PHASE2:Hg19::chr11:47399947..47399961,-#_7583cd17241380d7a7d2488a62294d95p3@SPI1
3.76e-96FFCP PHASE1:Hg19::chr17:72709134..72709145,-#_96a91dfb45c6747ca817fdce8b1d74d1p2@CD300LF
3.76e-96FFCP PHASE2:Hg19::chr17:72709134..72709145,-#_96a91dfb45c6747ca817fdce8b1d74d1p2@CD300LF
6.69e-96FFCP PHASE2:Hg19::chr19:36400209..36400286,-#_5f69e00e7234b78e5e9ebe0d5fe2d887p@chr19:36400209..36400286, -
6.69e-96FFCP PHASE1:Hg19::chr19:36400209..36400286,-#_5f69e00e7234b78e5e9ebe0d5fe2d887p@chr19:36400209..36400286, -
7.75e-96FFCP PHASE1:Hg19::chr11:70161074..70161080,-#_09bd364f043110f684231d60a998ab0dp@chr11:70161074..70161080, -
7.75e-96FFCP PHASE2:Hg19::chr11:70161074..70161080,-#_09bd364f043110f684231d60a998ab0dp@chr11:70161074..70161080, -
7.57e-95FFCP PHASE2:Hg19::chr2:109204909..109204928,+#_01f29621db13d456c9252acc85d0f38bp3@LIMS1
7.57e-95FFCP PHASE1:Hg19::chr2:109204909..109204928,+#_01f29621db13d456c9252acc85d0f38bp3@LIMS1
1.23e-94FFCP PHASE1:Hg19::chr6:36665587..36665612,+#_ab43022fabb6f03e773b4abb2cc11756p1@uc010jwl.1
1.23e-94FFCP PHASE2:Hg19::chr6:36665587..36665612,+#_ab43022fabb6f03e773b4abb2cc11756p1@uc010jwl.1
4.83e-94FFCP PHASE2:Hg19::chr22:46998103..46998127,-#_17e73d8063eb5719e4aa570b6da4a18ap@chr22:46998103..46998127, -
4.83e-94FFCP PHASE1:Hg19::chr22:46998103..46998127,-#_17e73d8063eb5719e4aa570b6da4a18ap@chr22:46998103..46998127, -
6.81e-94FFCP PHASE1:Hg19::chr5:57787254..57787271,+#_60fd978dcd489dfbdfcbb92e218e8be0p2@GAPT
6.81e-94FFCP PHASE2:Hg19::chr5:57787254..57787271,+#_60fd978dcd489dfbdfcbb92e218e8be0p2@GAPT
2.22e-93FFCP PHASE2:Hg19::chr6:31583632..31583651,+#_6edf4c530b0086c3889ee811d9633579p5@AIF1
2.22e-93FFCP PHASE1:Hg19::chr6:31583632..31583651,+#_6edf4c530b0086c3889ee811d9633579p5@AIF1
6.0e-93FFCP PHASE2:Hg19::chr16:50313426..50313459,+#_acab667d8d35b062f5aae26349ca6790p@chr16:50313426..50313459, +
6.0e-93FFCP PHASE1:Hg19::chr16:50313426..50313459,+#_acab667d8d35b062f5aae26349ca6790p@chr16:50313426..50313459, +
7.03e-93FFCP PHASE1:Hg19::chr11:47399996..47400014,-#_9a74a9f6e7503bfd622dc71a0f933f88p4@SPI1
7.03e-93FFCP PHASE2:Hg19::chr11:47399996..47400014,-#_9a74a9f6e7503bfd622dc71a0f933f88p4@SPI1
9.92e-93FFCP PHASE2:Hg19::chr17:4642716..4642727,-#_adcaffde615768a14ae916ebf84eb13ep7@CXCL16
9.92e-93FFCP PHASE1:Hg19::chr17:4642716..4642727,-#_adcaffde615768a14ae916ebf84eb13ep7@CXCL16
1.41e-92FFCP PHASE2:Hg19::chr3:98482159..98482172,+#_5a48fd1b96186f573e78a64cbf2260a6p5@ST3GAL6
1.41e-92FFCP PHASE1:Hg19::chr3:98482159..98482172,+#_5a48fd1b96186f573e78a64cbf2260a6p5@ST3GAL6
1.63e-92FFCP PHASE1:Hg19::chr6:137105206..137105220,+#_445b911af367a06e54a0ea9c18640bc8p@chr6:137105206..137105220, +
1.63e-92FFCP PHASE2:Hg19::chr6:137105206..137105220,+#_445b911af367a06e54a0ea9c18640bc8p@chr6:137105206..137105220, +
2.56e-92FFCP PHASE2:Hg19::chr13:108922478..108922493,+#_c22036553d2e987d5c845de6fdb97e21p5@TNFSF13B
2.56e-92FFCP PHASE1:Hg19::chr13:108922478..108922493,+#_c22036553d2e987d5c845de6fdb97e21p5@TNFSF13B
6.37e-92FFCP PHASE2:Hg19::chr22:37257098..37257115,+#_a04cf2f16ee8c6424888d8114bd69e10p3@NCF4
6.37e-92FFCP PHASE1:Hg19::chr22:37257098..37257115,+#_a04cf2f16ee8c6424888d8114bd69e10p3@NCF4
7.64e-92FFCP PHASE1:Hg19::chr19:36398154..36398173,-#_7cc212730177e42767d6078f8a9ebf7fp@chr19:36398154..36398173, -
7.64e-92FFCP PHASE2:Hg19::chr19:36398154..36398173,-#_7cc212730177e42767d6078f8a9ebf7fp@chr19:36398154..36398173, -
1.22e-91FFCP PHASE2:Hg19::chr7:2832730..2832791,+#_bdb46e7965a22e8bc803a201c136b8ebp@chr7:2832730..2832791, +
1.22e-91FFCP PHASE1:Hg19::chr7:2832730..2832791,+#_bdb46e7965a22e8bc803a201c136b8eb+, p@chr7:2832730..2832791
2.01e-91FFCP PHASE2:Hg19::chr17:9923211..9923249,-#_d5a83f6143d1c7610e80e05720b0702ep10@GAS7
2.01e-91FFCP PHASE1:Hg19::chr17:9923211..9923249,-#_d5a83f6143d1c7610e80e05720b0702ep10@GAS7
4.57e-91FFCP PHASE2:Hg19::chr5:176936817..176936841,-#_ac6f80f530c907aaa30f6c7b67b5a8a6p2@DOK3
4.57e-91FFCP PHASE1:Hg19::chr5:176936817..176936841,-#_ac6f80f530c907aaa30f6c7b67b5a8a6p2@DOK3
1.8e-90FFCP PHASE1:Hg19::chr22:37257002..37257013,+#_9ae36270f4b86597ad56e391191dbffep4@NCF4
1.8e-90FFCP PHASE2:Hg19::chr22:37257002..37257013,+#_9ae36270f4b86597ad56e391191dbffep4@NCF4
2.43e-90FFCP PHASE2:Hg19::chr19:18286116..18286156,+#_e644ed8b8bb2e64b7671b42c9f9f2da0p@chr19:18286116..18286156, +
2.43e-90FFCP PHASE1:Hg19::chr19:18286116..18286156,+#_e644ed8b8bb2e64b7671b42c9f9f2da0p@chr19:18286116..18286156, +
3.13e-90FFCP PHASE1:Hg19::chr1:161188661..161188679,+#_d9d2e0cc60c9099a21afecf376496bdbp@chr1:161188661..161188679, +
3.13e-90FFCP PHASE2:Hg19::chr1:161188661..161188679,+#_d9d2e0cc60c9099a21afecf376496bdbp@chr1:161188661..161188679, +
9.35e-90FFCP PHASE2:Hg19::chr6:31554766..31554777,+#_544abaa23d1366efe0ba961eb220cc3ep8@LST1
9.35e-90FFCP PHASE1:Hg19::chr6:31554766..31554777,+#_544abaa23d1366efe0ba961eb220cc3ep8@LST1
9.81e-90FFCP PHASE1:Hg19::chr17:6916789..6916808,+#_7f278895f1a080695a29d96acd113734p10@C17orf49
9.81e-90FFCP PHASE2:Hg19::chr17:6916789..6916808,+#_7f278895f1a080695a29d96acd113734p10@C17orf49
1.04e-89FFCP PHASE2:Hg19::chr14:103587759..103587770,+#_88de00a7c7160664b426a4ddde557525p@chr14:103587759..103587770, +
1.04e-89FFCP PHASE1:Hg19::chr14:103587759..103587770,+#_88de00a7c7160664b426a4ddde557525p@chr14:103587759..103587770, +
2.62e-89FFCP PHASE1:Hg19::chr19:51714319..51714374,+#_b81fb03bcfc29a6ca3eb164803d56da0p@chr19:51714319..51714374, +
2.62e-89FFCP PHASE2:Hg19::chr19:51714319..51714374,+#_b81fb03bcfc29a6ca3eb164803d56da0p@chr19:51714319..51714374, +
4.84e-89FFCP PHASE2:Hg19::chr6:137105237..137105263,+#_2e50278dac9e2fd398f2c310fcb0f0c1p@chr6:137105237..137105263, +
4.84e-89FFCP PHASE1:Hg19::chr6:137105237..137105263,+#_2e50278dac9e2fd398f2c310fcb0f0c1p@chr6:137105237..137105263, +
4.9e-89FFCP PHASE1:Hg19::chr5:176936844..176936870,-#_50304a477484d7c24cb15a4936961021p3@DOK3
4.9e-89FFCP PHASE2:Hg19::chr5:176936844..176936870,-#_50304a477484d7c24cb15a4936961021p3@DOK3
7.3e-89FFCP PHASE1:Hg19::chr22:32034409..32034470,-#_f272f3c3fe91808a8f17b24ca7d49c1bp4@PISD
7.3e-89FFCP PHASE2:Hg19::chr22:32034409..32034470,-#_f272f3c3fe91808a8f17b24ca7d49c1bp4@PISD
8.29e-89FFCP PHASE1:Hg19::chr1:161039459..161039478,-#_cb0ede32e80b6b11034623baa28e848ap4@ARHGAP30
8.29e-89FFCP PHASE2:Hg19::chr1:161039459..161039478,-#_cb0ede32e80b6b11034623baa28e848ap4@ARHGAP30
9.58e-89FFCP PHASE2:Hg19::chr1:161475228..161475239,+#_2205da984eb2fbd99719d400bdd0089ep3@FCGR2A
9.58e-89FFCP PHASE1:Hg19::chr1:161475228..161475239,+#_2205da984eb2fbd99719d400bdd0089ep3@FCGR2A
1.26e-88FFCP PHASE1:Hg19::chr18:5466317..5466374,-#_33f32bd892b6d028cbeb5b1d0ebcfe54p@chr18:5466317..5466374, -
1.26e-88FFCP PHASE2:Hg19::chr18:5466317..5466374,-#_33f32bd892b6d028cbeb5b1d0ebcfe54p@chr18:5466317..5466374, -
1.34e-88FFCP PHASE1:Hg19::chr16:8738211..8738249,+#_91e43ad49b629eb3a73eaa907b50fa8cp@chr16:8738211..8738249, +
1.34e-88FFCP PHASE2:Hg19::chr16:8738211..8738249,+#_91e43ad49b629eb3a73eaa907b50fa8cp@chr16:8738211..8738249, +
2.3e-88FFCP PHASE2:Hg19::chr19:18285955..18285972,+#_ae21dfda9a697b32b98b1c37c5e881cbp@chr19:18285955..18285972, +
2.3e-88FFCP PHASE1:Hg19::chr19:18285955..18285972,+#_ae21dfda9a697b32b98b1c37c5e881cbp@chr19:18285955..18285972, +
3.13e-88FFCP PHASE1:Hg19::chr1:28211791..28211853,+#_026bccf37f14d5f0ef2bad2f30f82608p@chr1:28211791..28211853, +
3.13e-88FFCP PHASE2:Hg19::chr1:28211791..28211853,+#_026bccf37f14d5f0ef2bad2f30f82608p@chr1:28211791..28211853, +

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