Personal tools

CL:0000306

From FANTOM5_SSTAR

Jump to: navigation, search
Name:crystallin accumulating cell
Namespace:FANTOM
Xrefs:
links:
FBbt:00004193
Synonyms: "lens cell" EXACT []


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0000325(stuff accumulating cell)



Children


is a:CL:0002222 (vertebrate lens cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000306 (crystallin accumulating cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
1.41e-88FFCP PHASE1:Hg19::chr22:25595823..25595826,+#_b6ae962fa4c590104cbf8224cb6ba097p1@CRYBB3
1.41e-88FFCP PHASE2:Hg19::chr22:25595823..25595826,+#_b6ae962fa4c590104cbf8224cb6ba097p1@CRYBB3
3.32e-74FFCP PHASE2:Hg19::chr22:25615600..25615611,+#_58eb098e89882725c6e4acfbded13217p1@CRYBB2
3.32e-74FFCP PHASE1:Hg19::chr22:25615600..25615611,+#_58eb098e89882725c6e4acfbded13217p1@CRYBB2
5.48e-74FFCP PHASE1:Hg19::chr19:51891222..51891233,-#_602976f82bd9a6459408e8c9361d87d9p1@LIM2
5.48e-74FFCP PHASE2:Hg19::chr19:51891222..51891233,-#_602976f82bd9a6459408e8c9361d87d9p1@LIM2
3.8e-56FFCP PHASE2:Hg19::chr22:27017921..27017928,+#_a0156de55808f43ec693912960003612p1@CRYBA4
3.8e-56FFCP PHASE1:Hg19::chr22:27017921..27017928,+#_a0156de55808f43ec693912960003612p1@CRYBA4
3.1e-50FFCP PHASE1:Hg19::chr13:104778247..104778293,+#_51b9267196bf715576d3608bedc0baa7p@chr13:104778247..104778293, +
3.1e-50FFCP PHASE2:Hg19::chr20:61204240..61204241,+#_51b9267196bf715576d3608bedc0baa7p@chr20:61204240..61204241, +
3.1e-50FFCP PHASE2:Hg19::chr13:104778247..104778293,+#_51b9267196bf715576d3608bedc0baa7p@chr13:104778247..104778293, +
3.1e-50FFCP PHASE1:Hg19::chr20:61204240..61204241,+#_51b9267196bf715576d3608bedc0baa7p@chr20:61204240..61204241, +
5.14e-50FFCP PHASE2:Hg19::chr14:37642016..37642022,-#_fffe83df1937c7d028740e7d741dab29p7@SLC25A21
5.14e-50FFCP PHASE2:Hg19::chr21:44592820..44592840,-#_fffe83df1937c7d028740e7d741dab29p2@CU686889
5.14e-50FFCP PHASE1:Hg19::chr21:44592820..44592840,-#_fffe83df1937c7d028740e7d741dab29p2@CU686889
5.14e-50FFCP PHASE1:Hg19::chr14:37642016..37642022,-#_fffe83df1937c7d028740e7d741dab29p7@SLC25A21
6.6e-50FFCP PHASE1:Hg19::chr12:132475501..132475504,+#_081de36320935aa20ce82cf039742f9ep@chr12:132475501..132475504, +
6.6e-50FFCP PHASE2:Hg19::chr21:44592842..44592867,-#_081de36320935aa20ce82cf039742f9ep1@CU686889
6.6e-50FFCP PHASE1:Hg19::chr21:44592842..44592867,-#_081de36320935aa20ce82cf039742f9ep1@CU686889
6.6e-50FFCP PHASE2:Hg19::chr21:44589339..44589372,-#_081de36320935aa20ce82cf039742f9ep@chr21:44589339..44589372, -
6.6e-50FFCP PHASE1:Hg19::chr21:44589339..44589372,-#_081de36320935aa20ce82cf039742f9ep@chr21:44589339..44589372, -
6.6e-50FFCP PHASE2:Hg19::chr12:132475501..132475504,+#_081de36320935aa20ce82cf039742f9ep@chr12:132475501..132475504, +
6.27e-44FFCP PHASE1:Hg19::chr11:31827535..31827565,-#_56d6c8cd9d3967edaa0ed2500e5f80b1p11@PAX6
6.27e-44FFCP PHASE2:Hg19::chr11:31827535..31827565,-#_56d6c8cd9d3967edaa0ed2500e5f80b1p11@PAX6
1.92e-41FFCP PHASE2:Hg19::chr3:186262166..186262170,-#_5a9f1f56acd83d7f2132600f633b9cddp1@CRYGS
1.92e-41FFCP PHASE1:Hg19::chr3:186262166..186262170,-#_5a9f1f56acd83d7f2132600f633b9cddp1@CRYGS
4.94e-40FFCP PHASE2:Hg19::chr5:112173525..112173532,+#_79ffb8ce21445c610c6913766c14048cp@chr5:112173525..112173532, +
4.94e-40FFCP PHASE1:Hg19::chr5:112173525..112173532,+#_79ffb8ce21445c610c6913766c14048cp@chr5:112173525..112173532, +
1.62e-37FFCP PHASE2:Hg19::chr1:29586692..29586705,+#_4ba9ef181805a2b62e6f915a7309cf1fp7@PTPRU
1.62e-37FFCP PHASE1:Hg19::chr1:29586692..29586705,+#_4ba9ef181805a2b62e6f915a7309cf1fp7@PTPRU
2.1e-35FFCP PHASE2:Hg19::chr14:60975644..60975673,+#_a59da596a58104c04dbbbc6f89ef38eap3@SIX6
2.1e-35FFCP PHASE1:Hg19::chr14:60975644..60975673,+#_a59da596a58104c04dbbbc6f89ef38eap3@SIX6
6.73e-35FFCP PHASE1:Hg19::chr14:60975871..60975880,+#_2f372152444dbf8755aa57821cbf1fabp4@SIX6
6.73e-35FFCP PHASE2:Hg19::chr14:60975871..60975880,+#_2f372152444dbf8755aa57821cbf1fabp4@SIX6
5.06e-34FFCP PHASE2:Hg19::chr11:31667372..31667383,-#_5da4ac949c75b15b28a55c0583201427p@chr11:31667372..31667383, -
5.06e-34FFCP PHASE1:Hg19::chr11:31667372..31667383,-#_5da4ac949c75b15b28a55c0583201427p@chr11:31667372..31667383, -
8.36e-34FFCP PHASE1:Hg19::chr19:1470631..1470648,-#_eb57fa067ad696124b3bafc30b22290ap@chr19:1470631..1470648, -
8.36e-34FFCP PHASE2:Hg19::chr19:1470631..1470648,-#_eb57fa067ad696124b3bafc30b22290ap@chr19:1470631..1470648, -
5.55e-33FFCP PHASE2:Hg19::chr21:44589135..44589151,+#_66fa4f00e14b351c5704a0420619f5e3p1@CRYAA
5.55e-33FFCP PHASE1:Hg19::chr21:44589135..44589151,+#_66fa4f00e14b351c5704a0420619f5e3p1@CRYAA
9.55e-33FFCP PHASE1:Hg19::chr17:27573875..27573878,+#_d12ddfb08200968ff6555a208cf90be3p1@CRYBA1
9.55e-33FFCP PHASE2:Hg19::chr17:27573875..27573878,+#_d12ddfb08200968ff6555a208cf90be3p1@CRYBA1
2.74e-29FFCP PHASE2:Hg19::chr2:45168589..45168601,-#_17f94ce675dc2bbeb53aa11220517c1ap2@ENST00000456467
2.74e-29FFCP PHASE1:Hg19::chr2:45168589..45168601,-#_17f94ce675dc2bbeb53aa11220517c1ap2@ENST00000456467
3.65e-29FFCP PHASE2:Hg19::chr7:107883678..107883689,-#_23927c2cb3b242c6a32c7099d4719f64p13@NRCAM
3.65e-29FFCP PHASE1:Hg19::chr7:107883678..107883689,-#_23927c2cb3b242c6a32c7099d4719f64p13@NRCAM
7.46e-29FFCP PHASE2:Hg19::chr13:114202163..114202178,+#_aa7d8b3ac7924528d213d94d52cfe7dfp@chr13:114202163..114202178, +
7.46e-29FFCP PHASE1:Hg19::chr13:114202163..114202178,+#_aa7d8b3ac7924528d213d94d52cfe7dfp@chr13:114202163..114202178, +
1.36e-28FFCP PHASE2:Hg19::chr3:173116225..173116242,+#_94f488137c23c4123bd51740412c61eap10@NLGN1
1.36e-28FFCP PHASE1:Hg19::chr3:173116225..173116242,+#_94f488137c23c4123bd51740412c61eap10@NLGN1
2.64e-27FFCP PHASE2:Hg19::chr2:45169233..45169244,+#_223a1bd7352635e152e1c3be446c2d1ap10@SIX3
2.64e-27FFCP PHASE1:Hg19::chr2:45169233..45169244,+#_223a1bd7352635e152e1c3be446c2d1ap10@SIX3
8.39e-27FFCP PHASE2:Hg19::chr14:60975858..60975869,+#_1e14c948fe709b0f07389a5919de564bp2@SIX6
8.39e-27FFCP PHASE1:Hg19::chr14:60975858..60975869,+#_1e14c948fe709b0f07389a5919de564bp2@SIX6
5.56e-26FFCP PHASE2:Hg19::chr19:40920692..40920700,-#_76aefcf0a3eccb924c0c4cdfcaa5bb0fp@chr19:40920692..40920700, -
5.56e-26FFCP PHASE2:Hg19::chr3:150690809..150690822,-#_76aefcf0a3eccb924c0c4cdfcaa5bb0fp3@CLRN1
5.56e-26FFCP PHASE1:Hg19::chr3:150690809..150690822,-#_76aefcf0a3eccb924c0c4cdfcaa5bb0fp3@CLRN1
5.56e-26FFCP PHASE2:Hg19::chr9:75848662..75848671,-#_76aefcf0a3eccb924c0c4cdfcaa5bb0fp@chr9:75848662..75848671, -
5.56e-26FFCP PHASE1:Hg19::chr9:75848662..75848671,-#_76aefcf0a3eccb924c0c4cdfcaa5bb0fp@chr9:75848662..75848671, -
5.56e-26FFCP PHASE1:Hg19::chr1:147374915..147374932,+#_76aefcf0a3eccb924c0c4cdfcaa5bb0fp1@GJA8
5.56e-26FFCP PHASE2:Hg19::chr1:147374915..147374932,+#_76aefcf0a3eccb924c0c4cdfcaa5bb0fp1@GJA8
5.56e-26FFCP PHASE2:Hg19::chr20:35861148..35861151,+#_76aefcf0a3eccb924c0c4cdfcaa5bb0fp@chr20:35861148..35861151, +
5.56e-26FFCP PHASE1:Hg19::chr20:35861148..35861151,+#_76aefcf0a3eccb924c0c4cdfcaa5bb0fp@chr20:35861148..35861151, +
5.56e-26FFCP PHASE2:Hg19::chrX:43587410..43587413,+#_76aefcf0a3eccb924c0c4cdfcaa5bb0fp@chrX:43587410..43587413, +
5.56e-26FFCP PHASE1:Hg19::chrX:43587410..43587413,+#_76aefcf0a3eccb924c0c4cdfcaa5bb0fp@chrX:43587410..43587413, +
5.56e-26FFCP PHASE1:Hg19::chr19:40920692..40920700,-#_76aefcf0a3eccb924c0c4cdfcaa5bb0fp@chr19:40920692..40920700, -
7.14e-26FFCP PHASE1:Hg19::chr5:464155..464205,+#_4ac91bbc22f6b2dd48820a338ab08b1ep@chr5:464155..464205, +
7.14e-26FFCP PHASE2:Hg19::chr10:73406056..73406065,+#_4ac91bbc22f6b2dd48820a338ab08b1ep@chr10:73406056..73406065, +
7.14e-26FFCP PHASE1:Hg19::chr11:65361417..65361421,-#_4ac91bbc22f6b2dd48820a338ab08b1ep2@KCNK7
7.14e-26FFCP PHASE1:Hg19::chr16:17563573..17563582,+#_4ac91bbc22f6b2dd48820a338ab08b1ep@chr16:17563573..17563582, +
7.14e-26FFCP PHASE2:Hg19::chr7:123198284..123198329,-#_4ac91bbc22f6b2dd48820a338ab08b1ep3@NDUFA5
7.14e-26FFCP PHASE2:Hg19::chr9:100057272..100057276,+#_4ac91bbc22f6b2dd48820a338ab08b1ep@chr9:100057272..100057276, +
7.14e-26FFCP PHASE2:Hg19::chr21:44592512..44592521,+#_4ac91bbc22f6b2dd48820a338ab08b1ep@chr21:44592512..44592521, +
7.14e-26FFCP PHASE1:Hg19::chr7:123198284..123198329,-#_4ac91bbc22f6b2dd48820a338ab08b1ep3@NDUFA5
7.14e-26FFCP PHASE2:Hg19::chr21:36253916..36253918,-#_4ac91bbc22f6b2dd48820a338ab08b1ep@chr21:36253916..36253918, -
7.14e-26FFCP PHASE1:Hg19::chr9:100057272..100057276,+#_4ac91bbc22f6b2dd48820a338ab08b1ep@chr9:100057272..100057276, +
7.14e-26FFCP PHASE1:Hg19::chr21:44592512..44592521,+#_4ac91bbc22f6b2dd48820a338ab08b1ep@chr21:44592512..44592521, +
7.14e-26FFCP PHASE2:Hg19::chr3:156322310..156322314,-#_4ac91bbc22f6b2dd48820a338ab08b1ep@chr3:156322310..156322314, -
7.14e-26FFCP PHASE1:Hg19::chr16:85617064..85617073,-#_4ac91bbc22f6b2dd48820a338ab08b1ep@chr16:85617064..85617073, -
7.14e-26FFCP PHASE2:Hg19::chr16:85617064..85617073,-#_4ac91bbc22f6b2dd48820a338ab08b1ep@chr16:85617064..85617073, -
7.14e-26FFCP PHASE1:Hg19::chr21:36253916..36253918,-#_4ac91bbc22f6b2dd48820a338ab08b1ep@chr21:36253916..36253918, -
7.14e-26FFCP PHASE1:Hg19::chr3:156322310..156322314,-#_4ac91bbc22f6b2dd48820a338ab08b1ep@chr3:156322310..156322314, -
7.14e-26FFCP PHASE2:Hg19::chr12:56848437..56848442,-#_4ac91bbc22f6b2dd48820a338ab08b1ep1@MIP
7.14e-26FFCP PHASE1:Hg19::chr13:72440726..72440736,-#_4ac91bbc22f6b2dd48820a338ab08b1ep19@DACH1
7.14e-26FFCP PHASE1:Hg19::chr19:41727698..41727705,+#_4ac91bbc22f6b2dd48820a338ab08b1ep@chr19:41727698..41727705, +
7.14e-26FFCP PHASE2:Hg19::chr13:44875179..44875188,-#_4ac91bbc22f6b2dd48820a338ab08b1ep@chr13:44875179..44875188, -
7.14e-26FFCP PHASE2:Hg19::chr19:41727698..41727705,+#_4ac91bbc22f6b2dd48820a338ab08b1ep@chr19:41727698..41727705, +
7.14e-26FFCP PHASE2:Hg19::chr21:44592626..44592635,-#_4ac91bbc22f6b2dd48820a338ab08b1ep5@CU686889
7.14e-26FFCP PHASE1:Hg19::chr21:44592626..44592635,-#_4ac91bbc22f6b2dd48820a338ab08b1ep5@CU686889
7.14e-26FFCP PHASE2:Hg19::chr4:140656282..140656285,-#_4ac91bbc22f6b2dd48820a338ab08b1ep@chr4:140656282..140656285, -
7.14e-26FFCP PHASE1:Hg19::chr19:17137781..17137792,-#_4ac91bbc22f6b2dd48820a338ab08b1ep6@CPAMD8
7.14e-26FFCP PHASE2:Hg19::chr11:65361417..65361421,-#_4ac91bbc22f6b2dd48820a338ab08b1ep2@KCNK7
7.14e-26FFCP PHASE2:Hg19::chr19:17137781..17137792,-#_4ac91bbc22f6b2dd48820a338ab08b1ep6@CPAMD8
7.14e-26FFCP PHASE1:Hg19::chr4:140656282..140656285,-#_4ac91bbc22f6b2dd48820a338ab08b1ep@chr4:140656282..140656285, -
7.14e-26FFCP PHASE2:Hg19::chr16:17563573..17563582,+#_4ac91bbc22f6b2dd48820a338ab08b1ep@chr16:17563573..17563582, +
7.14e-26FFCP PHASE1:Hg19::chr10:73406056..73406065,+#_4ac91bbc22f6b2dd48820a338ab08b1ep@chr10:73406056..73406065, +
7.14e-26FFCP PHASE2:Hg19::chr21:44592750..44592758,-#_4ac91bbc22f6b2dd48820a338ab08b1ep4@CU686889
7.14e-26FFCP PHASE2:Hg19::chr2:45154282..45154288,-#_4ac91bbc22f6b2dd48820a338ab08b1ep@chr2:45154282..45154288, -
7.14e-26FFCP PHASE2:Hg19::chr1:45769711..45769721,-#_4ac91bbc22f6b2dd48820a338ab08b1ep@chr1:45769711..45769721, -
7.14e-26FFCP PHASE1:Hg19::chr21:44592750..44592758,-#_4ac91bbc22f6b2dd48820a338ab08b1ep4@CU686889