CL:0000325
From FANTOM5_SSTAR
Name: | stuff accumulating cell |
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Namespace: | FANTOM |
Definition: | "A cell that is specialised to accumulate a particular substance(s)." [FB:ma] |
Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.
link to ontology dataset
data
Parents
is_a: | CL:0000003(native cell) |
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Children
is a: | CL:0000136 (fat cell),CL:0000147 (pigment cell),CL:0000234 (phagocyte),CL:0000306 (crystallin accumulating cell),CL:0000311 (keratin accumulating cell),CL:0000328 (myelin accumulating cell) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10647-109A8 (lens epithelial cell line:SRA 01/04)
- 10843-111E6 (merkel cell carcinoma cell line:MKL-1)
- 10844-111E7 (merkel cell carcinoma cell line:MS-1)
- 11215-116A9 (Retinal Pigment Epithelial Cells, donor0)
- 11232-116C8 (Macrophage - monocyte derived, donor1)
- 11251-116E9 (Keratinocyte - oral, donor1)
- 11259-116F8 (Adipocyte - subcutaneous, donor1)
- 11272-116H3 (Keratinocyte - epidermal, donor1)
- 11274-116H5 (Melanocyte - light, donor1)
- 11313-117C8 (Macrophage - monocyte derived, donor2)
... further results Mouse (Mus musculus)
- 10647-109A8 (lens epithelial cell line:SRA 01/04)
- 10843-111E6 (merkel cell carcinoma cell line:MKL-1)
- 10844-111E7 (merkel cell carcinoma cell line:MS-1)
- 11215-116A9 (Retinal Pigment Epithelial Cells, donor0)
- 11232-116C8 (Macrophage - monocyte derived, donor1)
- 11251-116E9 (Keratinocyte - oral, donor1)
- 11259-116F8 (Adipocyte - subcutaneous, donor1)
- 11272-116H3 (Keratinocyte - epidermal, donor1)
- 11274-116H5 (Melanocyte - light, donor1)
- 11313-117C8 (Macrophage - monocyte derived, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000325 (stuff accumulating cell), sorted by p-values
Analyst: Hideya Kawaji
link to source dataset
human : data
mouse : data
No analysis results for this cluster