CL:0000827
From FANTOM5_SSTAR
Name: | pro-T cell |
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Namespace: | FANTOM |
Definition: | "A lymphoid progenitor cell of the T cell lineage, with some lineage specific marker expression, but not yet fully committed to the T cell lineage." [GOC:add, ISBN:0781735149] |
Synonyms: |
"DN1 cell" NARROW [] "DN1 thymocyte" NARROW [] "pro-T lymphocyte" EXACT [] "progenitor T cell" EXACT [] "TN1 cell" NARROW [] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | CL:0000838(lymphoid lineage restricted progenitor cell) |
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develops_from: | CL:0000051(common lymphoid progenitor) |
Children
is a: | CL:0000894 (DN1 thymic pro-T cell),CL:0002425 (early T lineage precursor) |
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develops from: | CL:0000084 (T cell) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000827 (pro-T cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data