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CL:0002494

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Name:cardiocyte
Namespace:FANTOM
Definition:"A cell located in the heart, including both muscle and non muscle cells." [GOC:tfm]
Xrefs:
links:

BTO:0001539
FMA:83808

FMA:84791
Synonyms: "heart cell" EXACT []
Comments:From Onard of the FMA: Cardiac muscle cell or cardiac myocyte is a striated muscle cell. Cardiocyte on the other hand is any cell in the heart which includes cells other than muscle cells (e.g. endothelial cell of endocardium). Unless there is a consensus among anatomists that cardiocytes refer only to muscle cells, we will treat them as a general class of cells in the heart.
Created by:tmeehan
Creation date:2010-12-07T09:37:22Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0000548(animal cell),CL:0002371(somatic cell)
part_of:UBERON:0007100(primary circulatory organ)



Children


is a:CL:0000513 (cardiac muscle myoblast),CL:0000569 (cardiac mesenchymal cell),CL:0000746 (cardiac muscle cell),CL:0002548 (cardiac fibroblast),CL:0002592 (smooth muscle cell of the coronary artery)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002494 (cardiocyte), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
1.58e-86FFCP PHASE2:Mm9::chr9:102766842..102766853,+#_fc15e5ed66a0b93de2bfd8990e2d1542p@chr9:102766842..102766853, +
1.58e-86FFCP PHASE2:Mm9::chr19:20567096..20567107,+#_fc15e5ed66a0b93de2bfd8990e2d1542p3@E030003E18Rik
1.58e-86FFCP PHASE1:Mm9::chr19:20567096..20567107,+#_fc15e5ed66a0b93de2bfd8990e2d1542p3@E030003E18Rik
1.58e-86FFCP PHASE2:Mm9::chr7:106471695..106471701,+#_fc15e5ed66a0b93de2bfd8990e2d1542p@chr7:106471695..106471701, +
1.58e-86FFCP PHASE2:Mm9::chr9:56096674..56096680,+#_fc15e5ed66a0b93de2bfd8990e2d1542p@chr9:56096674..56096680, +
1.58e-86FFCP PHASE1:Mm9::chr7:106471695..106471701,+#_fc15e5ed66a0b93de2bfd8990e2d1542p@chr7:106471695..106471701, +
1.58e-86FFCP PHASE1:Mm9::chr9:102766842..102766853,+#_fc15e5ed66a0b93de2bfd8990e2d1542p@chr9:102766842..102766853, +
1.58e-86FFCP PHASE1:Mm9::chr9:56096674..56096680,+#_fc15e5ed66a0b93de2bfd8990e2d1542p@chr9:56096674..56096680, +
1.33e-65FFCP PHASE1:Mm9::chr6:91183204..91183213,+#_045442523cc2396832f43e86d89dd8e0p@chr6:91183204..91183213, +
1.33e-65FFCP PHASE2:Mm9::chr6:91183204..91183213,+#_045442523cc2396832f43e86d89dd8e0p@chr6:91183204..91183213, +
2.21e-65FFCP PHASE2:Mm9::chr19:20567153..20567160,+#_2715b49d4cbd8bd521a4beb039380ce3p7@E030003E18Rik
2.21e-65FFCP PHASE1:Mm9::chr19:20567153..20567160,+#_2715b49d4cbd8bd521a4beb039380ce3p7@E030003E18Rik
4.9e-53FFCP PHASE2:Mm9::chr11:43827555..43827566,+#_ab4b752acd4ac9d7ae69883d14091664p@chr11:43827555..43827566, +
4.9e-53FFCP PHASE2:Mm9::chr7:117772048..117772059,+#_ab4b752acd4ac9d7ae69883d14091664p@chr7:117772048..117772059, +
4.9e-53FFCP PHASE1:Mm9::chr11:43827555..43827566,+#_ab4b752acd4ac9d7ae69883d14091664p@chr11:43827555..43827566, +
4.9e-53FFCP PHASE2:Mm9::chr19:20567067..20567078,+#_ab4b752acd4ac9d7ae69883d14091664p6@E030003E18Rik
4.9e-53FFCP PHASE1:Mm9::chr19:20567067..20567078,+#_ab4b752acd4ac9d7ae69883d14091664p6@E030003E18Rik
4.9e-53FFCP PHASE1:Mm9::chr8:11239175..11239178,-#_ab4b752acd4ac9d7ae69883d14091664p@chr8:11239175..11239178, -
4.9e-53FFCP PHASE1:Mm9::chr7:117772048..117772059,+#_ab4b752acd4ac9d7ae69883d14091664p@chr7:117772048..117772059, +
4.9e-53FFCP PHASE1:Mm9::chr6:91222464..91222477,+#_ab4b752acd4ac9d7ae69883d14091664p@chr6:91222464..91222477, +
4.9e-53FFCP PHASE2:Mm9::chr6:91222464..91222477,+#_ab4b752acd4ac9d7ae69883d14091664p@chr6:91222464..91222477, +
4.9e-53FFCP PHASE2:Mm9::chr8:11239175..11239178,-#_ab4b752acd4ac9d7ae69883d14091664p@chr8:11239175..11239178, -
4.9e-53FFCP PHASE2:Mm9::chr3:103596528..103596539,-#_ab4b752acd4ac9d7ae69883d14091664p@chr3:103596528..103596539, -
4.9e-53FFCP PHASE1:Mm9::chr3:103596528..103596539,-#_ab4b752acd4ac9d7ae69883d14091664p@chr3:103596528..103596539, -
7.35e-53FFCP PHASE1:Mm9::chr5:30339923..30339935,+#_10952593b149d8ae0182eb9bfde15739p2@Il6
7.35e-53FFCP PHASE2:Mm9::chr5:30339923..30339935,+#_10952593b149d8ae0182eb9bfde15739p2@Il6
1.17e-52FFCP PHASE2:Hg19::chr7:81146338..81146341,-#_fa75392d22a67ec933afb4a923d6ae45p@chr7:81146338..81146341, -
1.17e-52FFCP PHASE1:Hg19::chr7:81146338..81146341,-#_fa75392d22a67ec933afb4a923d6ae45p@chr7:81146338..81146341, -
1.18e-44FFCP PHASE2:Mm9::chr8:11449034..11449045,+#_49fb28e6589b88aa20e061c95d2a0975p@chr8:11449034..11449045, +
1.18e-44FFCP PHASE2:Mm9::chr19:20567168..20567179,+#_49fb28e6589b88aa20e061c95d2a0975p5@E030003E18Rik
1.18e-44FFCP PHASE1:Mm9::chr19:20567168..20567179,+#_49fb28e6589b88aa20e061c95d2a0975p5@E030003E18Rik
1.18e-44FFCP PHASE1:Mm9::chr8:11449034..11449045,+#_49fb28e6589b88aa20e061c95d2a0975p@chr8:11449034..11449045, +
1.66e-44FFCP PHASE2:Mm9::chr11:61392754..61392766,-#_39b6200052580540b5d2d55ac3f70a3ap@chr11:61392754..61392766, -
1.66e-44FFCP PHASE1:Mm9::chr11:61392754..61392766,-#_39b6200052580540b5d2d55ac3f70a3ap@chr11:61392754..61392766, -
3.27e-44FFCP PHASE1:Mm9::chr3:103792260..103792309,+#_a45224ce47991acb431a08f0f2feabd9p@chr3:103792260..103792309, +
3.27e-44FFCP PHASE2:Mm9::chr3:103792260..103792309,+#_a45224ce47991acb431a08f0f2feabd9p@chr3:103792260..103792309, +
8.97e-44FFCP PHASE1:Mm9::chr5:93362343..93362363,+#_6b3c396e694cfff9f17008d7304b28a6p@chr5:93362343..93362363, +
8.97e-44FFCP PHASE2:Mm9::chr5:93362343..93362363,+#_6b3c396e694cfff9f17008d7304b28a6p@chr5:93362343..93362363, +
2.45e-43FFCP PHASE2:Mm9::chrX:160838683..160838694,+#_e1bddb496671702e55a53b5fb8fb66bap@chrX:160838683..160838694, +
2.45e-43FFCP PHASE1:Mm9::chrX:160838683..160838694,+#_e1bddb496671702e55a53b5fb8fb66bap@chrX:160838683..160838694, +
2.62e-42FFCP PHASE1:Hg19::chr17:77019002..77019027,+#_9a60058f517ffe12a1f58d227b3a383ep@chr17:77019002..77019027, +
2.62e-42FFCP PHASE2:Hg19::chr17:77019002..77019027,+#_9a60058f517ffe12a1f58d227b3a383ep@chr17:77019002..77019027, +
1.7e-39FFCP PHASE1:Mm9::chr8:125956526..125956533,-#_0795bb053bde50c6e9a8895d3a7a636fp@chr8:125956526..125956533, -
1.7e-39FFCP PHASE2:Mm9::chr8:125956526..125956533,-#_0795bb053bde50c6e9a8895d3a7a636fp@chr8:125956526..125956533, -
2.66e-39FFCP PHASE1:Mm9::chr15:76984103..76984104,-#_67a7e6d35cf1e912d8bddf3e98132cccp18@Rbfox2
2.66e-39FFCP PHASE1:Mm9::chr8:125952865..125952872,-#_67a7e6d35cf1e912d8bddf3e98132cccp@chr8:125952865..125952872, -
2.66e-39FFCP PHASE2:Mm9::chr15:76984103..76984104,-#_67a7e6d35cf1e912d8bddf3e98132cccp18@Rbfox2
2.66e-39FFCP PHASE2:Mm9::chr8:125952865..125952872,-#_67a7e6d35cf1e912d8bddf3e98132cccp@chr8:125952865..125952872, -
4.15e-39FFCP PHASE1:Mm9::chr6:91202567..91202570,+#_66f4bb4f9118f49871cc6fbc400ca60dp@chr6:91202567..91202570, +
4.15e-39FFCP PHASE1:Mm9::chr7:117927007..117927010,+#_66f4bb4f9118f49871cc6fbc400ca60dp@chr7:117927007..117927010, +
4.15e-39FFCP PHASE2:Mm9::chr6:91202567..91202570,+#_66f4bb4f9118f49871cc6fbc400ca60dp@chr6:91202567..91202570, +
4.15e-39FFCP PHASE2:Mm9::chr7:117927007..117927010,+#_66f4bb4f9118f49871cc6fbc400ca60dp@chr7:117927007..117927010, +
1.17e-38FFCP PHASE1:Mm9::chr6:91184012..91184021,+#_818f001efdbbe78ad11605ba314b2519p@chr6:91184012..91184021, +
1.17e-38FFCP PHASE2:Mm9::chr6:91184012..91184021,+#_818f001efdbbe78ad11605ba314b2519p@chr6:91184012..91184021, +
1.56e-38FFCP PHASE1:Mm9::chr16:58465599..58465600,+#_2aac025b83e1e32b13f1251ddfefdf3dp@chr16:58465599..58465600, +
1.56e-38FFCP PHASE2:Mm9::chr16:58465599..58465600,+#_2aac025b83e1e32b13f1251ddfefdf3dp@chr16:58465599..58465600, +
2.79e-38FFCP PHASE2:Mm9::chr4:141154145..141154160,-#_5912689644d4f9237ad2801527a5b6f4p6@Fblim1
2.79e-38FFCP PHASE1:Mm9::chr4:141154145..141154160,-#_5912689644d4f9237ad2801527a5b6f4p6@Fblim1
3.73e-38FFCP PHASE2:Mm9::chr3:54920096..54920117,+#_ee36f12f6eedd012ae6a8c3cdb9daa6ap7@Spg20
3.73e-38FFCP PHASE1:Mm9::chr3:54920096..54920117,+#_ee36f12f6eedd012ae6a8c3cdb9daa6ap7@Spg20
6.0e-38FFCP PHASE2:Hg19::chr17:10195132..10195137,+#_5e5eb212cecf5fd6e2c8a19df12c288ap@chr17:10195132..10195137, +
6.0e-38FFCP PHASE1:Hg19::chr17:10195132..10195137,+#_5e5eb212cecf5fd6e2c8a19df12c288ap@chr17:10195132..10195137, +
6.64e-38FFCP PHASE2:Mm9::chr12:105433069..105433075,-#_48c96e11312797c5996d9329f0e61ceap@chr12:105433069..105433075, -
6.64e-38FFCP PHASE1:Mm9::chr12:105433069..105433075,-#_48c96e11312797c5996d9329f0e61ceap@chr12:105433069..105433075, -
8.86e-38FFCP PHASE1:Mm9::chrX:65748600..65748616,+#_38f703434e0b2c4e141065256e049bf4p@chrX:65748600..65748616, +
8.86e-38FFCP PHASE1:Mm9::chr18:61220910..61220912,+#_38f703434e0b2c4e141065256e049bf4p@chr18:61220910..61220912, +
8.86e-38FFCP PHASE2:Mm9::chr18:61220910..61220912,+#_38f703434e0b2c4e141065256e049bf4p@chr18:61220910..61220912, +
8.86e-38FFCP PHASE2:Mm9::chrX:65748600..65748616,+#_38f703434e0b2c4e141065256e049bf4p@chrX:65748600..65748616, +
2.24e-37FFCP PHASE2:Hg19::chr17:77018953..77018966,+#_b9bde35e9c6ded55ffc3dc5c48ff0322p@chr17:77018953..77018966, +
2.24e-37FFCP PHASE1:Hg19::chr17:77018953..77018966,+#_b9bde35e9c6ded55ffc3dc5c48ff0322p@chr17:77018953..77018966, +
1.36e-34FFCP PHASE2:Hg19::chr14:61929948..61929975,+#_e87fefc6de0893384afcddfe7e0b7714p20@PRKCH
1.36e-34FFCP PHASE1:Hg19::chr14:61929948..61929975,+#_e87fefc6de0893384afcddfe7e0b7714p20@PRKCH
3.67e-34FFCP PHASE1:Mm9::chr6:91222095..91222107,+#_30258a656b3441e0f2e59623c037f2afp@chr6:91222095..91222107, +
3.67e-34FFCP PHASE2:Mm9::chr6:91222095..91222107,+#_30258a656b3441e0f2e59623c037f2afp@chr6:91222095..91222107, +
3.67e-34FFCP PHASE1:Mm9::chr6:91183490..91183501,+#_30258a656b3441e0f2e59623c037f2afp@chr6:91183490..91183501, +
3.67e-34FFCP PHASE2:Mm9::chr6:91183490..91183501,+#_30258a656b3441e0f2e59623c037f2afp@chr6:91183490..91183501, +
3.67e-34FFCP PHASE2:Mm9::chr7:19425360..19425369,+#_30258a656b3441e0f2e59623c037f2afp2@Mill2
3.67e-34FFCP PHASE1:Mm9::chr7:19425360..19425369,+#_30258a656b3441e0f2e59623c037f2afp2@Mill2
7.89e-34FFCP PHASE1:Mm9::chr5:137542830..137542841,-#_cb82a4638c7190c39596db257139d96ap@chr5:137542830..137542841, -
7.89e-34FFCP PHASE2:Mm9::chr5:137542830..137542841,-#_cb82a4638c7190c39596db257139d96ap@chr5:137542830..137542841, -
8.46e-34FFCP PHASE2:Hg19::chr2:169938317..169938331,+#_7888a182af89d7b3e678c5a575ea1786p3@DHRS9
8.46e-34FFCP PHASE1:Hg19::chr2:169938317..169938331,+#_7888a182af89d7b3e678c5a575ea1786p3@DHRS9
3.61e-33FFCP PHASE1:Mm9::chr5:77778263..77778301,+#_1bcd757f7450b0e0c6b9bed66263afbbp@chr5:77778263..77778301, +
3.61e-33FFCP PHASE2:Mm9::chr5:77778263..77778301,+#_1bcd757f7450b0e0c6b9bed66263afbbp@chr5:77778263..77778301, +
3.61e-33FFCP PHASE2:Mm9::chr11:81849982..81850000,+#_1bcd757f7450b0e0c6b9bed66263afbbp@chr11:81849982..81850000, +
3.61e-33FFCP PHASE1:Mm9::chr11:81849982..81850000,+#_1bcd757f7450b0e0c6b9bed66263afbbp@chr11:81849982..81850000, +
5.97e-33FFCP PHASE1:Mm9::chr16:37834682..37834693,+#_2491fdd83f0ae71665f7023b4a75eb7bp@chr16:37834682..37834693, +
5.97e-33FFCP PHASE2:Mm9::chr16:37834682..37834693,+#_2491fdd83f0ae71665f7023b4a75eb7bp@chr16:37834682..37834693, +
7.68e-33FFCP PHASE1:Mm9::chr13:5863732..5863743,+#_90bd6975db81df7e2e126ed0ed1a95b8p@chr13:5863732..5863743, +
7.68e-33FFCP PHASE2:Mm9::chr13:5863732..5863743,+#_90bd6975db81df7e2e126ed0ed1a95b8p@chr13:5863732..5863743, +
7.68e-33FFCP PHASE2:Mm9::chr3:88420206..88420215,+#_90bd6975db81df7e2e126ed0ed1a95b8p18@Arhgef2
7.68e-33FFCP PHASE1:Mm9::chr3:88420206..88420215,+#_90bd6975db81df7e2e126ed0ed1a95b8p18@Arhgef2
1.0e-30FFCP PHASE2:Hg19::chr17:77018898..77018919,+#_5e92c6490346bec20758bc2a5b0f98f7p@chr17:77018898..77018919, +
1.0e-30FFCP PHASE1:Hg19::chr17:77018898..77018919,+#_5e92c6490346bec20758bc2a5b0f98f7p@chr17:77018898..77018919, +
1.16e-30FFCP PHASE2:Mm9::chr3:103596496..103596513,-#_5c35b8e126e999c8c7f68ac27371fa14p@chr3:103596496..103596513, -
1.16e-30FFCP PHASE1:Mm9::chr3:103596496..103596513,-#_5c35b8e126e999c8c7f68ac27371fa14p@chr3:103596496..103596513, -
1.16e-30FFCP PHASE2:Mm9::chrX:130443013..130443020,+#_5c35b8e126e999c8c7f68ac27371fa14p6@Srpx2
1.16e-30FFCP PHASE1:Mm9::chrX:130443013..130443020,+#_5c35b8e126e999c8c7f68ac27371fa14p6@Srpx2
1.46e-30FFCP PHASE1:Mm9::chr6:91220024..91220048,+#_149ec9da5c9f9904b0055a411eefe372p@chr6:91220024..91220048, +
1.46e-30FFCP PHASE2:Mm9::chr6:91220024..91220048,+#_149ec9da5c9f9904b0055a411eefe372p@chr6:91220024..91220048, +