UBERON:0007100
From FANTOM5_SSTAR
Name: | primary circulatory organ | ||
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Namespace: | FANTOM | ||
Definition: | "A hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood[GO]." [GO:0007507] | ||
Xrefs: |
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Synonyms: |
"adult heart" RELATED [FBbt:00003154] "cardiac pump" EXACT [] "cardiac structure" RELATED [] "dorsal tube" NARROW [Wikipedia:Heart] "heart" NARROW [GO:0007507] "heart or heart like organ" EXACT [] | ||
Comments: | editor note: we need to find the appropriate GO process to use for the definition - 'blood circulation' may not apply to invertebrates; 'circulatory system process' is circular. Note we cannot use a part_of-based definition as this results in the iris and all vascular elements being categorized as circulatory organs. Taxon notes: note we reserve the subclass 'heart' from the vertebrate multi-chambered heart. "The first heart-like organ is believed to have appeared 500my ago in an ancestral bilaterian". Amniotes: four-chambered heart. Amphibians: two atria, one ventricle, pulmonary; fish: single atrium and ventricle; amphioxus: tubular, non-striated, closed, unidirectional; ascidians: tubular, striated, open, bidirectional; arthropods: tubular, open; C elegans: contractile pharynx; Cnideria: striated muscle cells associated with gastrodermis. Gene notes: Bmp, Nkx, Gata | ||
Subset: | grouping_class |
Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.
link to ontology dataset
data
Parents
is_a: | UBERON:0015228(circulatory organ) |
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part_of: | UBERON:0001009(circulatory system) |
Children
is a: | UBERON:0000948 (heart) |
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part of: | CL:0000746 (cardiac muscle cell),CL:0002494 (cardiocyte) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10016-101C7 (heart, adult, pool1)
- 10046-101G1 (heart, fetal, pool1)
- 10050-101G5 (heart, adult, diseased post-infarction, donor1)
- 10051-101G6 (heart, adult, diseased, donor1)
- 10078-102A6 (left ventricle, adult, donor1)
- 10079-102A7 (left atrium, adult, donor1)
- 10087-102B6
- 10205-103F7 (heart - mitral valve, adult)
- 10206-103F8 (heart - pulmonic valve, adult)
- 10207-103F9 (heart - tricuspid valve, adult)
... further results Mouse (Mus musculus)
- 10016-101C7 (heart, adult, pool1)
- 10046-101G1 (heart, fetal, pool1)
- 10050-101G5 (heart, adult, diseased post-infarction, donor1)
- 10051-101G6 (heart, adult, diseased, donor1)
- 10078-102A6 (left ventricle, adult, donor1)
- 10079-102A7 (left atrium, adult, donor1)
- 10087-102B6
- 10205-103F7 (heart - mitral valve, adult)
- 10206-103F8 (heart - pulmonic valve, adult)
- 10207-103F9 (heart - tricuspid valve, adult)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007100 (primary circulatory organ), sorted by p-values
Analyst: Hideya Kawaji
link to source dataset
human : data
mouse : data
P-value | FFCP | Short description |
---|---|---|
1.09e-81 | FFCP PHASE1:Mm9::chr4:147375434..147375447,+#_51964097263442c9eecfc750d638af3e | p@chr4:147375434..147375447, + |
1.09e-81 | FFCP PHASE2:Mm9::chr4:147375434..147375447,+#_51964097263442c9eecfc750d638af3e | p@chr4:147375434..147375447, + |
1.09e-81 | FFCP PHASE1:Mm9::chr1:137747392..137747402,-#_51964097263442c9eecfc750d638af3e | p@chr1:137747392..137747402, - |
1.09e-81 | FFCP PHASE2:Mm9::chr1:137747392..137747402,-#_51964097263442c9eecfc750d638af3e | p@chr1:137747392..137747402, - |
1.09e-81 | FFCP PHASE1:Mm9::chr9:24549775..24549776,-#_51964097263442c9eecfc750d638af3e | p@chr9:24549775..24549776, - |
1.09e-81 | FFCP PHASE2:Mm9::chr9:24549775..24549776,-#_51964097263442c9eecfc750d638af3e | p@chr9:24549775..24549776, - |
5.69e-81 | FFCP PHASE2:Hg19::chr17:77019002..77019027,+#_653e72ab25b5d33370f1abf2903c44fd | p@chr17:77019002..77019027, + |
5.69e-81 | FFCP PHASE1:Hg19::chr17:77019002..77019027,+#_653e72ab25b5d33370f1abf2903c44fd | p@chr17:77019002..77019027, + |
2.21e-79 | FFCP PHASE1:Hg19::chr17:77018953..77018966,+#_10881b560d1ebe029bb42fde521acc61 | p@chr17:77018953..77018966, + |
2.21e-79 | FFCP PHASE2:Hg19::chr17:77018953..77018966,+#_10881b560d1ebe029bb42fde521acc61 | p@chr17:77018953..77018966, + |
1.88e-78 | FFCP PHASE2:Mm9::chr4:140980456..140980463,+#_a6e8a2c1f45de514e93b752b8ba5f4ec | p@chr4:140980456..140980463, + |
1.88e-78 | FFCP PHASE1:Mm9::chr4:140980456..140980463,+#_a6e8a2c1f45de514e93b752b8ba5f4ec | p@chr4:140980456..140980463, + |
1.92e-77 | FFCP PHASE1:Mm9::chr12:113728951..113728965,+#_77d4c4d9af3217b9c97dce7da1dc578c | p@chr12:113728951..113728965, + |
1.92e-77 | FFCP PHASE2:Mm9::chr12:113728951..113728965,+#_77d4c4d9af3217b9c97dce7da1dc578c | p@chr12:113728951..113728965, + |
1.92e-77 | FFCP PHASE2:Mm9::chr1:137737483..137737497,-#_77d4c4d9af3217b9c97dce7da1dc578c | p@chr1:137737483..137737497, - |
1.92e-77 | FFCP PHASE1:Mm9::chr1:137737483..137737497,-#_77d4c4d9af3217b9c97dce7da1dc578c | p@chr1:137737483..137737497, - |
2.14e-77 | FFCP PHASE2:Mm9::chr4:147375200..147375220,+#_8b0f994f15e8a19d643bd690f0d14ce7 | p@chr4:147375200..147375220, + |
2.14e-77 | FFCP PHASE1:Mm9::chr19:36187511..36187515,-#_8b0f994f15e8a19d643bd690f0d14ce7 | p@chr19:36187511..36187515, - |
2.14e-77 | FFCP PHASE1:Mm9::chr4:147375200..147375220,+#_8b0f994f15e8a19d643bd690f0d14ce7 | p@chr4:147375200..147375220, + |
2.14e-77 | FFCP PHASE2:Mm9::chr19:36187511..36187515,-#_8b0f994f15e8a19d643bd690f0d14ce7 | p@chr19:36187511..36187515, - |
8.14e-77 | FFCP PHASE2:Mm9::chr19:36193772..36193793,-#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr19:36193772..36193793, - |
8.14e-77 | FFCP PHASE1:Mm9::chr14:55579265..55579297,-#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr14:55579265..55579297, - |
8.14e-77 | FFCP PHASE1:Mm9::chr14:55581579..55581620,-#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr14:55581579..55581620, - |
8.14e-77 | FFCP PHASE1:Mm9::chr14:55584197..55584239,-#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr14:55584197..55584239, - |
8.14e-77 | FFCP PHASE1:Mm9::chr14:55584272..55584298,-#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr14:55584272..55584298, - |
8.14e-77 | FFCP PHASE1:Mm9::chr14:55584663..55584731,-#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr14:55584663..55584731, - |
8.14e-77 | FFCP PHASE1:Mm9::chr14:55586837..55586880,-#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr14:55586837..55586880, - |
8.14e-77 | FFCP PHASE2:Mm9::chr4:147375901..147375913,+#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr4:147375901..147375913, + |
8.14e-77 | FFCP PHASE1:Mm9::chr15:88850827..88850850,+#_0ebbd06366a73ebcea0f8bc6cb089866 | p2@Mov10l1 |
8.14e-77 | FFCP PHASE1:Mm9::chr19:36193772..36193793,-#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr19:36193772..36193793, - |
8.14e-77 | FFCP PHASE1:Mm9::chr1:137743272..137743307,+#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr1:137743272..137743307, + |
8.14e-77 | FFCP PHASE1:Mm9::chr1:137744333..137744352,-#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr1:137744333..137744352, - |
8.14e-77 | FFCP PHASE1:Mm9::chr1:137744550..137744565,+#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr1:137744550..137744565, + |
8.14e-77 | FFCP PHASE1:Mm9::chr1:137744611..137744621,+#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr1:137744611..137744621, + |
8.14e-77 | FFCP PHASE1:Mm9::chr1:137744636..137744654,+#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr1:137744636..137744654, + |
8.14e-77 | FFCP PHASE1:Mm9::chr1:137744668..137744681,-#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr1:137744668..137744681, - |
8.14e-77 | FFCP PHASE1:Mm9::chr1:137745434..137745445,+#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr1:137745434..137745445, + |
8.14e-77 | FFCP PHASE1:Mm9::chr1:137747289..137747313,+#_0ebbd06366a73ebcea0f8bc6cb089866 | +, p@chr1:137747289..137747313 |
8.14e-77 | FFCP PHASE1:Mm9::chr1:137747382..137747385,-#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr1:137747382..137747385, - |
8.14e-77 | FFCP PHASE1:Mm9::chr1:137747953..137747967,-#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr1:137747953..137747967, - |
8.14e-77 | FFCP PHASE2:Mm9::chr14:55563577..55563611,-#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr14:55563577..55563611, - |
8.14e-77 | FFCP PHASE2:Mm9::chr14:55565785..55565833,-#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr14:55565785..55565833, - |
8.14e-77 | FFCP PHASE2:Mm9::chr14:55568737..55568746,-#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr14:55568737..55568746, - |
8.14e-77 | FFCP PHASE2:Mm9::chr14:55568790..55568803,-#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr14:55568790..55568803, - |
8.14e-77 | FFCP PHASE2:Mm9::chr14:55568937..55568988,-#_0ebbd06366a73ebcea0f8bc6cb089866 | -, p@chr14:55568937..55568988 |
8.14e-77 | FFCP PHASE2:Mm9::chr14:55571909..55571953,-#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr14:55571909..55571953, - |
8.14e-77 | FFCP PHASE2:Mm9::chr14:55572120..55572173,+#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr14:55572120..55572173, + |
8.14e-77 | FFCP PHASE2:Mm9::chr14:55579265..55579297,-#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr14:55579265..55579297, - |
8.14e-77 | FFCP PHASE2:Mm9::chr14:55581579..55581620,-#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr14:55581579..55581620, - |
8.14e-77 | FFCP PHASE2:Mm9::chr14:55584197..55584239,-#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr14:55584197..55584239, - |
8.14e-77 | FFCP PHASE2:Mm9::chr14:55584272..55584298,-#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr14:55584272..55584298, - |
8.14e-77 | FFCP PHASE2:Mm9::chr14:55584663..55584731,-#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr14:55584663..55584731, - |
8.14e-77 | FFCP PHASE2:Mm9::chr14:55586837..55586880,-#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr14:55586837..55586880, - |
8.14e-77 | FFCP PHASE2:Mm9::chr15:88850827..88850850,+#_0ebbd06366a73ebcea0f8bc6cb089866 | p2@Mov10l1 |
8.14e-77 | FFCP PHASE1:Mm9::chr4:147375901..147375913,+#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr4:147375901..147375913, + |
8.14e-77 | FFCP PHASE1:Mm9::chr5:120286706..120286736,+#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr5:120286706..120286736, + |
8.14e-77 | FFCP PHASE1:Mm9::chr11:58815923..58815951,-#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr11:58815923..58815951, - |
8.14e-77 | FFCP PHASE1:Mm9::chr11:65461897..65461929,-#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr11:65461897..65461929, - |
8.14e-77 | FFCP PHASE2:Mm9::chr5:120286706..120286736,+#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr5:120286706..120286736, + |
8.14e-77 | FFCP PHASE2:Mm9::chr1:137743272..137743307,+#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr1:137743272..137743307, + |
8.14e-77 | FFCP PHASE2:Mm9::chr1:137744333..137744352,-#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr1:137744333..137744352, - |
8.14e-77 | FFCP PHASE2:Mm9::chr1:137744550..137744565,+#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr1:137744550..137744565, + |
8.14e-77 | FFCP PHASE2:Mm9::chr1:137744611..137744621,+#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr1:137744611..137744621, + |
8.14e-77 | FFCP PHASE2:Mm9::chr1:137744636..137744654,+#_0ebbd06366a73ebcea0f8bc6cb089866 | +, p@chr1:137744636..137744654 |
8.14e-77 | FFCP PHASE2:Mm9::chr1:137744668..137744681,-#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr1:137744668..137744681, - |
8.14e-77 | FFCP PHASE2:Mm9::chr1:137745434..137745445,+#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr1:137745434..137745445, + |
8.14e-77 | FFCP PHASE2:Mm9::chr1:137747289..137747313,+#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr1:137747289..137747313, + |
8.14e-77 | FFCP PHASE2:Mm9::chr1:137747382..137747385,-#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr1:137747382..137747385, - |
8.14e-77 | FFCP PHASE2:Mm9::chr1:137747953..137747967,-#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr1:137747953..137747967, - |
8.14e-77 | FFCP PHASE2:Mm9::chr11:58815923..58815951,-#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr11:58815923..58815951, - |
8.14e-77 | FFCP PHASE2:Mm9::chr11:65461897..65461929,-#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr11:65461897..65461929, - |
8.14e-77 | FFCP PHASE1:Mm9::chr14:55563577..55563611,-#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr14:55563577..55563611, - |
8.14e-77 | FFCP PHASE1:Mm9::chr14:55565785..55565833,-#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr14:55565785..55565833, - |
8.14e-77 | FFCP PHASE1:Mm9::chr14:55568737..55568746,-#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr14:55568737..55568746, - |
8.14e-77 | FFCP PHASE1:Mm9::chr14:55568790..55568803,-#_0ebbd06366a73ebcea0f8bc6cb089866 | -, p@chr14:55568790..55568803 |
8.14e-77 | FFCP PHASE1:Mm9::chr14:55568937..55568988,-#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr14:55568937..55568988, - |
8.14e-77 | FFCP PHASE1:Mm9::chr14:55571909..55571953,-#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr14:55571909..55571953, - |
8.14e-77 | FFCP PHASE1:Mm9::chr14:55572120..55572173,+#_0ebbd06366a73ebcea0f8bc6cb089866 | p@chr14:55572120..55572173, + |
1.2e-73 | FFCP PHASE1:Mm9::chr1:137742152..137742184,-#_fe40d489e19641fa791cef9be436ab32 | p@chr1:137742152..137742184, - |
1.2e-73 | FFCP PHASE2:Mm9::chr1:137742152..137742184,-#_fe40d489e19641fa791cef9be436ab32 | p@chr1:137742152..137742184, - |
1.46e-72 | FFCP PHASE1:Mm9::chr7:4473478..4473505,-#_465d556be13caa16245407d1aa2d5e38 | p2@Tnni3 |
1.46e-72 | FFCP PHASE2:Mm9::chr1:137742470..137742481,+#_465d556be13caa16245407d1aa2d5e38 | p@chr1:137742470..137742481, + |
1.46e-72 | FFCP PHASE1:Mm9::chr14:55577329..55577367,-#_465d556be13caa16245407d1aa2d5e38 | p@chr14:55577329..55577367, - |
1.46e-72 | FFCP PHASE2:Mm9::chr16:5431481..5431510,+#_465d556be13caa16245407d1aa2d5e38 | p@chr16:5431481..5431510, + |
1.46e-72 | FFCP PHASE2:Mm9::chr7:4473478..4473505,-#_465d556be13caa16245407d1aa2d5e38 | p2@Tnni3 |
1.46e-72 | FFCP PHASE1:Mm9::chr16:5431481..5431510,+#_465d556be13caa16245407d1aa2d5e38 | p@chr16:5431481..5431510, + |
1.46e-72 | FFCP PHASE1:Mm9::chr1:137742470..137742481,+#_465d556be13caa16245407d1aa2d5e38 | p@chr1:137742470..137742481, + |
1.46e-72 | FFCP PHASE2:Mm9::chr14:55577329..55577367,-#_465d556be13caa16245407d1aa2d5e38 | p@chr14:55577329..55577367, - |
1.63e-72 | FFCP PHASE1:Mm9::chr5:58108164..58108178,+#_60735c988619e5db959bc6655406d1ec | p@chr5:58108164..58108178, + |
1.63e-72 | FFCP PHASE2:Mm9::chr10:53062244..53062249,+#_60735c988619e5db959bc6655406d1ec | p@chr10:53062244..53062249, + |
1.63e-72 | FFCP PHASE2:Mm9::chr5:58108164..58108178,+#_60735c988619e5db959bc6655406d1ec | p@chr5:58108164..58108178, + |
1.63e-72 | FFCP PHASE2:Mm9::chr2:17382210..17382221,-#_60735c988619e5db959bc6655406d1ec | p5@Nebl |
1.63e-72 | FFCP PHASE2:Mm9::chr2:113880065..113880076,+#_60735c988619e5db959bc6655406d1ec | p1@ENSMUST00000154140 |
1.63e-72 | FFCP PHASE2:Mm9::chr16:38713504..38713520,-#_60735c988619e5db959bc6655406d1ec | p11@Arhgap31 |
1.63e-72 | FFCP PHASE1:Mm9::chr10:53062244..53062249,+#_60735c988619e5db959bc6655406d1ec | p@chr10:53062244..53062249, + |
1.63e-72 | FFCP PHASE2:Mm9::chr19:36193739..36193752,-#_60735c988619e5db959bc6655406d1ec | p@chr19:36193739..36193752, - |
1.63e-72 | FFCP PHASE1:Mm9::chr2:17382210..17382221,-#_60735c988619e5db959bc6655406d1ec | p5@Nebl |
1.63e-72 | FFCP PHASE1:Mm9::chr16:38713504..38713520,-#_60735c988619e5db959bc6655406d1ec | p11@Arhgap31 |
1.63e-72 | FFCP PHASE1:Mm9::chr19:36193739..36193752,-#_60735c988619e5db959bc6655406d1ec | p@chr19:36193739..36193752, - |
1.63e-72 | FFCP PHASE1:Mm9::chr2:113880065..113880076,+#_60735c988619e5db959bc6655406d1ec | p1@ENSMUST00000154140 |