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CL:0002552

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Name:fibroblast of gingiva
Namespace:FANTOM
Created by:tmeehan
Creation date:2011-02-28T05:09:12Z


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data

Parents

is_a:CL:0000057(fibroblast)
part_of:UBERON:0001828(gingiva)



Children


derives from:FF:0000063 (human fibroblast of gingiva sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002552 (fibroblast of gingiva), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data

P-valueFFCPShort description
1.29e-97FFCP PHASE2:Hg19::chr1:75599672..75599682,-#_8a48b27a3b4473101d148dc9aeeb6373p@chr1:75599672..75599682, -
1.29e-97FFCP PHASE1:Hg19::chr1:75599672..75599682,-#_8a48b27a3b4473101d148dc9aeeb6373p@chr1:75599672..75599682, -
3.0e-76FFCP PHASE1:Hg19::chr1:75598362..75598407,-#_9c2ed40beef3d176071aad2f500e32fep1@ENST00000427892, p1@uc001dgp.1
3.0e-76FFCP PHASE2:Hg19::chr1:75598362..75598407,-#_9c2ed40beef3d176071aad2f500e32fep1@ENST00000427892, p1@uc001dgp.1
2.01e-53FFCP PHASE2:Hg19::chr1:75599683..75599699,-#_bcda8bc3e8d3e5784d730db3f6943090-, p@chr1:75599683..75599699
2.01e-53FFCP PHASE1:Hg19::chr1:75599683..75599699,-#_bcda8bc3e8d3e5784d730db3f6943090p@chr1:75599683..75599699, -
2.19e-53FFCP PHASE1:Hg19::chr9:94586900..94586909,-#_e45cdb0d8792dbe870190a02ebbe36f2p@chr9:94586900..94586909, -
2.19e-53FFCP PHASE2:Hg19::chr9:94586900..94586909,-#_e45cdb0d8792dbe870190a02ebbe36f2p@chr9:94586900..94586909, -
8.55e-45FFCP PHASE2:Hg19::chr1:241577071..241577081,+#_e19e0453d6829417dba760390d9cd689p@chr1:241577071..241577081, +
8.55e-45FFCP PHASE1:Hg19::chr1:241577071..241577081,+#_e19e0453d6829417dba760390d9cd689p@chr1:241577071..241577081, +
2.63e-43FFCP PHASE2:Hg19::chr2:172953513..172953549,-#_569e2654d605c39d35d34966eb4fe9b3p@chr2:172953513..172953549, -
2.63e-43FFCP PHASE1:Hg19::chr2:172953513..172953549,-#_569e2654d605c39d35d34966eb4fe9b3p@chr2:172953513..172953549, -
2.93e-43FFCP PHASE2:Hg19::chr16:70597904..70597915,+#_dbdca5e1c81c4fafbf46d11d75eaa3e0p5@SF3B3
2.93e-43FFCP PHASE1:Hg19::chr16:70597904..70597915,+#_dbdca5e1c81c4fafbf46d11d75eaa3e0p5@SF3B3
2.71e-40FFCP PHASE2:Hg19::chr12:85306433..85306434,-#_90ab00c015cd14a84a03b3733cc4fba5p5@SLC6A15
2.71e-40FFCP PHASE1:Hg19::chr12:85306433..85306434,-#_90ab00c015cd14a84a03b3733cc4fba5p5@SLC6A15
6.5e-40FFCP PHASE2:Hg19::chr1:75600318..75600329,+#_0c98927c1d1148139b2809952c888cd0p4@LHX8
6.5e-40FFCP PHASE1:Hg19::chr1:75600318..75600329,+#_0c98927c1d1148139b2809952c888cd0p4@LHX8
1.75e-39FFCP PHASE2:Hg19::chr1:75600067..75600094,+#_e0b386f48d4ad2cfa081158df97b2b23p2@LHX8
1.75e-39FFCP PHASE1:Hg19::chr1:75600067..75600094,+#_e0b386f48d4ad2cfa081158df97b2b23p2@LHX8
5.92e-38FFCP PHASE1:Hg19::chr1:83982415..83982420,+#_a5e606764cbe97e1564ecc138f06bfe1p@chr1:83982415..83982420, +
5.92e-38FFCP PHASE2:Hg19::chr1:83982415..83982420,+#_a5e606764cbe97e1564ecc138f06bfe1p@chr1:83982415..83982420, +
9.52e-38FFCP PHASE2:Hg19::chr6:1389690..1389700,-#_fd418cb7dfcfded5737f335ba09d421bp@chr6:1389690..1389700, -
9.52e-38FFCP PHASE1:Hg19::chr6:1389690..1389700,-#_fd418cb7dfcfded5737f335ba09d421bp@chr6:1389690..1389700, -
3.25e-36FFCP PHASE2:Hg19::chr4:152086796..152086808,-#_ba569d1126bbbc5c2dc93db6b285d31dp18@SH3D19
3.25e-36FFCP PHASE1:Hg19::chr4:152086796..152086808,-#_ba569d1126bbbc5c2dc93db6b285d31dp18@SH3D19
3.45e-36FFCP PHASE2:Hg19::chr1:75602043..75602093,+#_42a43a0c3920a8d7fd84c1af078a5d47p1@LHX8
3.45e-36FFCP PHASE1:Hg19::chr1:75602043..75602093,+#_42a43a0c3920a8d7fd84c1af078a5d47p1@LHX8
2.13e-34FFCP PHASE1:Hg19::chr6:148761357..148761368,+#_6541d22138b92d22916ad240377f1df2p21@SASH1
2.13e-34FFCP PHASE2:Hg19::chr6:148761357..148761368,+#_6541d22138b92d22916ad240377f1df2p21@SASH1
1.23e-32FFCP PHASE1:Hg19::chr18:46607960..46607989,-#_bb0373eaa34a8432bd636e43d361909cp@chr18:46607960..46607989, -
1.23e-32FFCP PHASE2:Hg19::chr18:46607960..46607989,-#_bb0373eaa34a8432bd636e43d361909cp@chr18:46607960..46607989, -
1.99e-32FFCP PHASE1:Hg19::chr12:115777087..115777091,+#_1d2b94c122597ab536d090f7a3c48e48+, p@chr12:115777087..115777091
1.99e-32FFCP PHASE2:Hg19::chr12:115777087..115777091,+#_1d2b94c122597ab536d090f7a3c48e48p@chr12:115777087..115777091, +
1.99e-32FFCP PHASE2:Hg19::chr3:170459091..170459101,-#_1d2b94c122597ab536d090f7a3c48e48p4@ENST00000473110
1.99e-32FFCP PHASE1:Hg19::chr3:170459091..170459101,-#_1d2b94c122597ab536d090f7a3c48e48p4@ENST00000473110
1.74e-28FFCP PHASE2:Hg19::chr4:152086844..152086857,-#_03904f48ab655a00b504173a1f8e7eb6p11@SH3D19
1.74e-28FFCP PHASE1:Hg19::chr4:152086844..152086857,-#_03904f48ab655a00b504173a1f8e7eb6p11@SH3D19
4.43e-28FFCP PHASE1:Hg19::chr9:96717663..96717666,-#_6b5ccfab72111b97a7df233cb6d9ac73p4@BARX1
4.43e-28FFCP PHASE2:Hg19::chr9:96717663..96717666,-#_6b5ccfab72111b97a7df233cb6d9ac73p4@BARX1
4.61e-28FFCP PHASE1:Hg19::chr6:1389871..1389876,+#_a8be525e40a4a28e7a2f30aaa420ee38p4@FOXF2
4.61e-28FFCP PHASE2:Hg19::chr6:1389871..1389876,+#_a8be525e40a4a28e7a2f30aaa420ee38p4@FOXF2
1.82e-27FFCP PHASE2:Hg19::chr6:57087225..57087229,-#_57a9390bcf0a3bc98fe7207ade10466fp12@RAB23
1.82e-27FFCP PHASE1:Hg19::chr6:57087225..57087229,-#_57a9390bcf0a3bc98fe7207ade10466fp12@RAB23
1.4e-26FFCP PHASE1:Hg19::chr1:241576976..241576987,+#_3b0e0e8bd52be1a8eefca89d73a4802cp@chr1:241576976..241576987, +
1.4e-26FFCP PHASE2:Hg19::chr1:241576976..241576987,+#_3b0e0e8bd52be1a8eefca89d73a4802cp@chr1:241576976..241576987, +
1.81e-26FFCP PHASE1:Hg19::chrX:19688475..19688492,-#_04dd41a74647da8e6f8177775a56b5edp26@SH3KBP1
1.81e-26FFCP PHASE2:Hg19::chrX:19688475..19688492,-#_04dd41a74647da8e6f8177775a56b5edp26@SH3KBP1
2.16e-26FFCP PHASE2:Hg19::chr18:65337698..65337712,+#_001beac3b9689c756849115b8581b3dap@chr18:65337698..65337712, +
2.16e-26FFCP PHASE1:Hg19::chr18:65337698..65337712,+#_001beac3b9689c756849115b8581b3dap@chr18:65337698..65337712, +
7.91e-25FFCP PHASE1:Hg19::chr14:37126765..37126799,+#_22d8a7125a576d694650644ee9542331p2@PAX9
7.91e-25FFCP PHASE2:Hg19::chr14:37126765..37126799,+#_22d8a7125a576d694650644ee9542331p2@PAX9
1.26e-24FFCP PHASE1:Hg19::chr6:1389613..1389637,-#_7b7c5635d4990fb5b1f21e4e79d20d86p@chr6:1389613..1389637, -
1.26e-24FFCP PHASE2:Hg19::chr6:1389613..1389637,-#_7b7c5635d4990fb5b1f21e4e79d20d86p@chr6:1389613..1389637, -
3.13e-24FFCP PHASE1:Hg19::chr14:37126141..37126157,-#_bbb5a49f3a852e24ed3f9057c4de29fep@chr14:37126141..37126157, -
3.13e-24FFCP PHASE2:Hg19::chr14:37126141..37126157,-#_bbb5a49f3a852e24ed3f9057c4de29fep@chr14:37126141..37126157, -
9.35e-24FFCP PHASE2:Hg19::chr2:96012277..96012290,+#_68aecf605f75610b7913796e9ec2daedp5@KCNIP3
9.35e-24FFCP PHASE1:Hg19::chr2:96012277..96012290,+#_68aecf605f75610b7913796e9ec2daedp5@KCNIP3
1.44e-23FFCP PHASE1:Hg19::chr4:138448109..138448113,-#_f162fd00cc3b80d05e8d946a31fa4845p@chr4:138448109..138448113, -
1.44e-23FFCP PHASE2:Hg19::chr4:138448109..138448113,-#_f162fd00cc3b80d05e8d946a31fa4845p@chr4:138448109..138448113, -
1.61e-23FFCP PHASE1:Hg19::chr10:28033565..28033575,-#_b2b287aebfedfa0bc26182eb61f80565p@chr10:28033565..28033575, -
1.61e-23FFCP PHASE2:Hg19::chr10:28033565..28033575,-#_b2b287aebfedfa0bc26182eb61f80565p@chr10:28033565..28033575, -
1.63e-23FFCP PHASE1:Hg19::chr1:241577012..241577023,+#_c40cdc64ca6839f45f0bc75c00aba6ef+, p@chr1:241577012..241577023
1.63e-23FFCP PHASE2:Hg19::chr1:241577012..241577023,+#_c40cdc64ca6839f45f0bc75c00aba6efp@chr1:241577012..241577023, +
2.02e-23FFCP PHASE1:Hg19::chr5:115270490..115270517,-#_33a05c6a312f74bad2786dcea2e8d951p@chr5:115270490..115270517, -
2.02e-23FFCP PHASE2:Hg19::chr5:115270490..115270517,-#_33a05c6a312f74bad2786dcea2e8d951p@chr5:115270490..115270517, -
2.57e-23FFCP PHASE1:Hg19::chr4:4865276..4865280,-#_e50e3f9345e08779286e2ac96a879438p@chr4:4865276..4865280, -
2.57e-23FFCP PHASE2:Hg19::chr4:4865276..4865280,-#_e50e3f9345e08779286e2ac96a879438p@chr4:4865276..4865280, -
4.04e-23FFCP PHASE1:Hg19::chr8:19364029..19364048,-#_a57f0b1ce98e2f0048ff73ffbfd7f78fp@chr8:19364029..19364048, -
4.04e-23FFCP PHASE2:Hg19::chr8:19364029..19364048,-#_a57f0b1ce98e2f0048ff73ffbfd7f78fp@chr8:19364029..19364048, -
4.7e-23FFCP PHASE2:Hg19::chr16:86985410..86985422,-#_479b2d723ce18810b71dd86f19a52c5cp@chr16:86985410..86985422, -
4.7e-23FFCP PHASE1:Hg19::chr16:86985410..86985422,-#_479b2d723ce18810b71dd86f19a52c5cp@chr16:86985410..86985422, -
1.21e-22FFCP PHASE2:Hg19::chr1:31883012..31883032,+#_e81df48604f1aa1d4593d24abaa2fecfp6@SERINC2
1.21e-22FFCP PHASE1:Hg19::chr1:31883012..31883032,+#_e81df48604f1aa1d4593d24abaa2fecfp6@SERINC2
3.25e-22FFCP PHASE1:Hg19::chr1:31883057..31883076,+#_dbfad7dad8af122d7cb45172023d01d3p7@SERINC2
3.25e-22FFCP PHASE2:Hg19::chr1:31883057..31883076,+#_dbfad7dad8af122d7cb45172023d01d3p7@SERINC2
1.83e-21FFCP PHASE1:Hg19::chr17:80354715..80354726,+#_dbc618b1544972f2ad838ecfd53ba605p@chr17:80354715..80354726, +
1.83e-21FFCP PHASE2:Hg19::chr17:80354715..80354726,+#_dbc618b1544972f2ad838ecfd53ba605p@chr17:80354715..80354726, +
3.71e-21FFCP PHASE1:Hg19::chrX:19688455..19688469,-#_5470587c229d0ac765b7421c012ccb39p21@SH3KBP1
3.71e-21FFCP PHASE2:Hg19::chrX:19688455..19688469,-#_5470587c229d0ac765b7421c012ccb39p21@SH3KBP1
5.15e-21FFCP PHASE1:Hg19::chr6:117086007..117086014,-#_28a65e7a524b5c6716874c751b390ac4p@chr6:117086007..117086014, -
5.15e-21FFCP PHASE2:Hg19::chr6:168333044..168333049,+#_28a65e7a524b5c6716874c751b390ac4p36@MLLT4
5.15e-21FFCP PHASE1:Hg19::chr2:55831402..55831405,-#_28a65e7a524b5c6716874c751b390ac4p19@SMEK2
5.15e-21FFCP PHASE2:Hg19::chr8:57360032..57360038,-#_28a65e7a524b5c6716874c751b390ac4p@chr8:57360032..57360038, -
5.15e-21FFCP PHASE2:Hg19::chr6:117086007..117086014,-#_28a65e7a524b5c6716874c751b390ac4p@chr6:117086007..117086014, -
5.15e-21FFCP PHASE1:Hg19::chr17:54893292..54893300,-#_28a65e7a524b5c6716874c751b390ac4p13@C17orf67
5.15e-21FFCP PHASE1:Hg19::chr9:3856474..3856490,-#_28a65e7a524b5c6716874c751b390ac4p1@DQ438884
5.15e-21FFCP PHASE1:Hg19::chr20:49253425..49253427,-#_28a65e7a524b5c6716874c751b390ac4p14@FAM65C
5.15e-21FFCP PHASE1:Hg19::chr10:24738547..24738558,+#_28a65e7a524b5c6716874c751b390ac4p39@KIAA1217
5.15e-21FFCP PHASE2:Hg19::chr17:54893213..54893220,-#_28a65e7a524b5c6716874c751b390ac4p12@C17orf67
5.15e-21FFCP PHASE2:Hg19::chr2:55831402..55831405,-#_28a65e7a524b5c6716874c751b390ac4p19@SMEK2
5.15e-21FFCP PHASE1:Hg19::chr11:103180104..103180109,+#_28a65e7a524b5c6716874c751b390ac4p@chr11:103180104..103180109, +
5.15e-21FFCP PHASE1:Hg19::chr2:175629305..175629312,-#_28a65e7a524b5c6716874c751b390ac4p8@CHRNA1
5.15e-21FFCP PHASE2:Hg19::chr20:49253425..49253427,-#_28a65e7a524b5c6716874c751b390ac4p14@FAM65C
5.15e-21FFCP PHASE2:Hg19::chr11:103180104..103180109,+#_28a65e7a524b5c6716874c751b390ac4p@chr11:103180104..103180109, +
5.15e-21FFCP PHASE2:Hg19::chr10:24738547..24738558,+#_28a65e7a524b5c6716874c751b390ac4p39@KIAA1217
5.15e-21FFCP PHASE2:Hg19::chr2:175629305..175629312,-#_28a65e7a524b5c6716874c751b390ac4p8@CHRNA1
5.15e-21FFCP PHASE1:Hg19::chr7:73149373..73149380,+#_28a65e7a524b5c6716874c751b390ac4p3@ABHD11-AS1
5.15e-21FFCP PHASE2:Hg19::chr17:54893292..54893300,-#_28a65e7a524b5c6716874c751b390ac4p13@C17orf67
5.15e-21FFCP PHASE2:Hg19::chr8:124665891..124665894,-#_28a65e7a524b5c6716874c751b390ac4p@chr8:124665891..124665894, -

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