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CL:0002599

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Name:smooth muscle cell of the esophagus
Namespace:FANTOM
Definition:"A smooth muscle cell of the esophagus." [GOC:tfm]
Created by:tmeehan
Creation date:2011-03-06T05:48:17Z


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data

Parents

is_a:CL:0000192(smooth muscle cell)
part_of:UBERON:0001043(esophagus)



Children


derives from:FF:0000182 (human esophageal smooth muscle cell sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002599 (smooth muscle cell of the esophagus), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr7:46193488..46193497,+#_fb9a2f80eaa5046cd30e3a6726108033p@chr7:46193488..46193497, +
5.42e-195FFCP PHASE1:Hg19::chr7:46193488..46193497,+#_fb9a2f80eaa5046cd30e3a6726108033p@chr7:46193488..46193497, +
2.39e-66FFCP PHASE1:Hg19::chr8:77108050..77108053,-#_101dddbe1f6b379beedaaa40f54debfcp@chr8:77108050..77108053, -
2.39e-66FFCP PHASE2:Hg19::chr8:77108050..77108053,-#_101dddbe1f6b379beedaaa40f54debfcp@chr8:77108050..77108053, -
9.91e-41FFCP PHASE1:Hg19::chr7:47622108..47622117,-#_7b8bdc9d49bba2abe471b37baaff817bp33@TNS3
9.91e-41FFCP PHASE2:Hg19::chr7:47622108..47622117,-#_7b8bdc9d49bba2abe471b37baaff817bp33@TNS3
7.48e-30FFCP PHASE1:Hg19::chr11:130298611..130298627,-#_ef51e71f35ac61edca96e814c7558b13p4@ADAMTS8
7.48e-30FFCP PHASE2:Hg19::chr11:130298611..130298627,-#_ef51e71f35ac61edca96e814c7558b13p4@ADAMTS8
1.33e-29FFCP PHASE2:Hg19::chr4:148885940..148885946,+#_9b7f31092d22a3b528854a70ca3c4b38p@chr4:148885940..148885946, +
1.33e-29FFCP PHASE1:Hg19::chr4:148885940..148885946,+#_9b7f31092d22a3b528854a70ca3c4b38p@chr4:148885940..148885946, +
1.78e-29FFCP PHASE1:Hg19::chr10:92178805..92178827,+#_d44fe52dd7de011aa7129740b4533729p@chr10:92178805..92178827, +
1.78e-29FFCP PHASE2:Hg19::chr10:92178805..92178827,+#_d44fe52dd7de011aa7129740b4533729p@chr10:92178805..92178827, +
9.79e-26FFCP PHASE2:Hg19::chrX:104568883..104568906,+#_9d4d013bd94cf8d6bf2c1db0398ef0d6p@chrX:104568883..104568906, +
9.79e-26FFCP PHASE1:Hg19::chrX:104568883..104568906,+#_9d4d013bd94cf8d6bf2c1db0398ef0d6p@chrX:104568883..104568906, +
3.28e-23FFCP PHASE2:Hg19::chr12:57000413..57000417,-#_f48b5d1f28d43cfc0122b3f3b0498f62p22@BAZ2A
3.28e-23FFCP PHASE1:Hg19::chr12:57000413..57000417,-#_f48b5d1f28d43cfc0122b3f3b0498f62p22@BAZ2A
1.88e-21FFCP PHASE1:Hg19::chr1:204276775..204276789,-#_e1c6247ef1d8175352af3389c144e020p@chr1:204276775..204276789, -
1.88e-21FFCP PHASE2:Hg19::chr1:204276775..204276789,-#_e1c6247ef1d8175352af3389c144e020p@chr1:204276775..204276789, -
2.3e-21FFCP PHASE1:Hg19::chr6:134210625..134210636,+#_f503c77e3a8ac26068453963c02bfb62p6@TCF21
2.3e-21FFCP PHASE2:Hg19::chr6:134210625..134210636,+#_f503c77e3a8ac26068453963c02bfb62p6@TCF21
2.82e-21FFCP PHASE2:Hg19::chr3:170150640..170150647,+#_72978ab143d86b4782e735c0ea18b359p@chr3:170150640..170150647, +
2.82e-21FFCP PHASE1:Hg19::chr3:170150640..170150647,+#_72978ab143d86b4782e735c0ea18b359p@chr3:170150640..170150647, +
6.31e-21FFCP PHASE2:Hg19::chr1:54791102..54791151,-#_0aa3f75c97f565c3f2092e98737ab1cbp6@SSBP3
6.31e-21FFCP PHASE1:Hg19::chr1:54791102..54791151,-#_0aa3f75c97f565c3f2092e98737ab1cbp6@SSBP3
1.08e-19FFCP PHASE2:Hg19::chr19:34787674..34787690,-#_cdeb8e080ecd5c45bb088d5bc9d745d5p1@ENST00000431093
1.08e-19FFCP PHASE1:Hg19::chr19:34787674..34787690,-#_cdeb8e080ecd5c45bb088d5bc9d745d5p1@ENST00000431093
1.88e-19FFCP PHASE2:Hg19::chr15:80843472..80843480,+#_7c9ff540582b3e2cffb091c29d1f51d8p22@ARNT2
1.88e-19FFCP PHASE1:Hg19::chr15:80843472..80843480,+#_7c9ff540582b3e2cffb091c29d1f51d8p22@ARNT2
7.37e-18FFCP PHASE2:Hg19::chr5:149425247..149425250,+#_be372443757229b534d6c8de621908dcp@chr5:149425247..149425250, +
7.37e-18FFCP PHASE1:Hg19::chr5:149425247..149425250,+#_be372443757229b534d6c8de621908dcp@chr5:149425247..149425250, +
1.44e-17FFCP PHASE1:Hg19::chr3:177652390..177652395,+#_e6f4b5fc7a9c7eb02ffcc141d918e605p1@ENST00000450500
1.44e-17FFCP PHASE2:Hg19::chr3:177652390..177652395,+#_e6f4b5fc7a9c7eb02ffcc141d918e605p1@ENST00000450500
6.47e-17FFCP PHASE1:Hg19::chr19:45261267..45261280,+#_fb5ced29514e79866eccf89c13aa6e3bp@chr19:45261267..45261280, +
6.47e-17FFCP PHASE2:Hg19::chr19:45261267..45261280,+#_fb5ced29514e79866eccf89c13aa6e3b+, p@chr19:45261267..45261280
7.57e-17FFCP PHASE2:Hg19::chr15:35731807..35731812,+#_1e4901bee981d413596aedcf9d16f7d2p@chr15:35731807..35731812, +
7.57e-17FFCP PHASE1:Hg19::chr15:35731807..35731812,+#_1e4901bee981d413596aedcf9d16f7d2p@chr15:35731807..35731812, +
8.86e-17FFCP PHASE2:Hg19::chr18:77557932..77557943,+#_4d9c588a4a5f871a944c673dab00b6c9p@chr18:77557932..77557943, +
8.86e-17FFCP PHASE1:Hg19::chr18:77557932..77557943,+#_4d9c588a4a5f871a944c673dab00b6c9p@chr18:77557932..77557943, +
1.41e-16FFCP PHASE1:Hg19::chr16:30367267..30367278,+#_fe1cacc5c4d54588c2c37d965fe63e53p@chr16:30367267..30367278, +
1.41e-16FFCP PHASE2:Hg19::chr16:30367267..30367278,+#_fe1cacc5c4d54588c2c37d965fe63e53p@chr16:30367267..30367278, +
9.99e-16FFCP PHASE1:Hg19::chr17:80037380..80037391,-#_bdfff332d7f65476e2e43f9ec4386facp6@BC065179
9.99e-16FFCP PHASE2:Hg19::chr17:80037380..80037391,-#_bdfff332d7f65476e2e43f9ec4386facp6@BC065179
1.54e-15FFCP PHASE2:Hg19::chr6:35688276..35688291,-#_c7b3288da405f81840040679b75224d3p@chr6:35688276..35688291, -
1.54e-15FFCP PHASE2:Hg19::chr14:72169012..72169030,+#_c7b3288da405f81840040679b75224d3p20@SIPA1L1
1.54e-15FFCP PHASE1:Hg19::chr6:35688276..35688291,-#_c7b3288da405f81840040679b75224d3p@chr6:35688276..35688291, -
1.54e-15FFCP PHASE1:Hg19::chr14:72169012..72169030,+#_c7b3288da405f81840040679b75224d3p20@SIPA1L1
2.06e-15FFCP PHASE2:Hg19::chr16:57880370..57880384,-#_638d53a60c2ec46ab2d2724b7f634692p8@KIFC3
2.06e-15FFCP PHASE1:Hg19::chr16:57880370..57880384,-#_638d53a60c2ec46ab2d2724b7f634692p8@KIFC3
7.13e-15FFCP PHASE2:Hg19::chr3:177623510..177623515,+#_f3fce2af0821784ec5bb532c336a0372p@chr3:177623510..177623515, +
7.13e-15FFCP PHASE1:Hg19::chr3:177623510..177623515,+#_f3fce2af0821784ec5bb532c336a0372p@chr3:177623510..177623515, +
4.53e-14FFCP PHASE1:Hg19::chr15:80800274..80800278,-#_01ace2d266d4a568c291effce5c9ae5cp@chr15:80800274..80800278, -
4.53e-14FFCP PHASE2:Hg19::chr15:80800274..80800278,-#_01ace2d266d4a568c291effce5c9ae5cp@chr15:80800274..80800278, -
7.55e-14FFCP PHASE1:Hg19::chr14:92343971..92343997,-#_fc26621f4ef509dcf86ca05bc69b50f0p@chr14:92343971..92343997, -
7.55e-14FFCP PHASE2:Hg19::chr14:92343971..92343997,-#_fc26621f4ef509dcf86ca05bc69b50f0p@chr14:92343971..92343997, -
2.62e-13FFCP PHASE1:Hg19::chr11:2950810..2950823,-#_dfc43e2ea16f57bb7d544a2fe9d61db6p4@PHLDA2
2.62e-13FFCP PHASE2:Hg19::chr11:2950810..2950823,-#_dfc43e2ea16f57bb7d544a2fe9d61db6p4@PHLDA2
9.92e-13FFCP PHASE2:Hg19::chr1:9970373..9970382,-#_3ee9b04bb530f6906e3f42a44b81985ep5@CTNNBIP1
9.92e-13FFCP PHASE1:Hg19::chr1:9970373..9970382,-#_3ee9b04bb530f6906e3f42a44b81985ep5@CTNNBIP1
1.4e-12FFCP PHASE2:Hg19::chr1:26907862..26907865,-#_2a29ddc373ed4b85c0b05ba40fb626c9p@chr1:26907862..26907865, -
1.4e-12FFCP PHASE1:Hg19::chr1:26907862..26907865,-#_2a29ddc373ed4b85c0b05ba40fb626c9p@chr1:26907862..26907865, -
5.05e-12FFCP PHASE2:Hg19::chr9:130829492..130829503,-#_d31ce0a9c407ee336774ee8f63a3d7fdp4@NAIF1
5.05e-12FFCP PHASE1:Hg19::chr9:130829492..130829503,-#_d31ce0a9c407ee336774ee8f63a3d7fdp4@NAIF1
7.76e-12FFCP PHASE2:Hg19::chr16:86612174..86612188,+#_b9f1b7e9bf228004a40dab2ad824020dp4@FOXL1
7.76e-12FFCP PHASE1:Hg19::chr16:86612174..86612188,+#_b9f1b7e9bf228004a40dab2ad824020dp4@FOXL1
8.64e-12FFCP PHASE2:Hg19::chr7:3234429..3234449,-#_de1cf05dded1d21924695c567b87a72ap@chr7:3234429..3234449, -
8.64e-12FFCP PHASE1:Hg19::chr7:3234429..3234449,-#_de1cf05dded1d21924695c567b87a72ap@chr7:3234429..3234449, -
1.07e-11FFCP PHASE1:Hg19::chr17:26890664..26890683,-#_550c6b67bffacf08aa9881e361d287c0p6@PIGS
1.07e-11FFCP PHASE2:Hg19::chr17:26890664..26890683,-#_550c6b67bffacf08aa9881e361d287c0p6@PIGS
1.31e-11FFCP PHASE1:Hg19::chr17:29335535..29335575,-#_22288cd79015607d1c1a42600d984517p@chr17:29335535..29335575, -
1.31e-11FFCP PHASE2:Hg19::chr17:29335535..29335575,-#_22288cd79015607d1c1a42600d984517p@chr17:29335535..29335575, -
2.18e-11FFCP PHASE2:Hg19::chr16:28841378..28841383,+#_34b7846990d3620ea17a5e5b759dd739p@chr16:28841378..28841383, +
2.18e-11FFCP PHASE1:Hg19::chr16:28841378..28841383,+#_34b7846990d3620ea17a5e5b759dd739p@chr16:28841378..28841383, +
2.79e-11FFCP PHASE1:Hg19::chr11:130298500..130298509,-#_60aa24946ee0556691743b7317402b28p1@ADAMTS8
2.79e-11FFCP PHASE2:Hg19::chr11:130298500..130298509,-#_60aa24946ee0556691743b7317402b28p1@ADAMTS8
2.96e-11FFCP PHASE1:Hg19::chr21:47539028..47539037,+#_5b1a091f2d3332c8e7ad87c30ae1d2a9p@chr21:47539028..47539037, +
2.96e-11FFCP PHASE2:Hg19::chr21:47539028..47539037,+#_5b1a091f2d3332c8e7ad87c30ae1d2a9p@chr21:47539028..47539037, +
6.14e-11FFCP PHASE1:Hg19::chr17:67757945..67757967,-#_53710c2ad1067680675241a92960b9c3p@chr17:67757945..67757967, -
6.14e-11FFCP PHASE2:Hg19::chr17:67757945..67757967,-#_53710c2ad1067680675241a92960b9c3p@chr17:67757945..67757967, -
6.14e-11FFCP PHASE1:Hg19::chr1:10477039..10477066,+#_53710c2ad1067680675241a92960b9c3p@chr1:10477039..10477066, +
6.14e-11FFCP PHASE2:Hg19::chr1:10477039..10477066,+#_53710c2ad1067680675241a92960b9c3p@chr1:10477039..10477066, +
1.19e-10FFCP PHASE2:Hg19::chr1:1567487..1567492,+#_f6dd4b12ef6edc6335432da84161a0b5p6@MMP23B
1.19e-10FFCP PHASE1:Hg19::chr1:1567487..1567492,+#_f6dd4b12ef6edc6335432da84161a0b5p6@MMP23B
1.43e-10FFCP PHASE1:Hg19::chr13:114630408..114630430,+#_eaeaeb50e9018efae538ad307de5daddp@chr13:114630408..114630430, +
1.43e-10FFCP PHASE2:Hg19::chr13:114630408..114630430,+#_eaeaeb50e9018efae538ad307de5daddp@chr13:114630408..114630430, +
2.28e-10FFCP PHASE1:Hg19::chr4:42399551..42399563,+#_84523537e1db99ded43f0c526d7d7778p2@SHISA3
2.28e-10FFCP PHASE2:Hg19::chr4:42399551..42399563,+#_84523537e1db99ded43f0c526d7d7778p2@SHISA3
2.84e-10FFCP PHASE1:Hg19::chr18:77557973..77557984,+#_8313b15291bf6abde1ac9aa6db24f922p@chr18:77557973..77557984, +
2.84e-10FFCP PHASE2:Hg19::chr18:77557973..77557984,+#_8313b15291bf6abde1ac9aa6db24f922p@chr18:77557973..77557984, +
3.01e-10FFCP PHASE1:Hg19::chr19:5212096..5212107,-#_5bb404ac398bd8f3d91ed1784d14204cp@chr19:5212096..5212107, -
3.01e-10FFCP PHASE2:Hg19::chr19:5212096..5212107,-#_5bb404ac398bd8f3d91ed1784d14204cp@chr19:5212096..5212107, -
3.71e-10FFCP PHASE1:Hg19::chr11:47279167..47279178,+#_742073819e2e4e2cbe055374fac80d22p10@NR1H3
3.71e-10FFCP PHASE2:Hg19::chr11:47279167..47279178,+#_742073819e2e4e2cbe055374fac80d22p10@NR1H3
5.79e-10FFCP PHASE2:Hg19::chr5:149682252..149682265,-#_9533f4a2f0f98e33acef76824da9c501p6@ARSI
5.79e-10FFCP PHASE1:Hg19::chr5:149682252..149682265,-#_9533f4a2f0f98e33acef76824da9c501p6@ARSI
6.33e-10FFCP PHASE2:Hg19::chr8:38008450..38008459,-#_4a73d32d5dc486376c7f1ab9e2654c99p4@STAR
6.33e-10FFCP PHASE1:Hg19::chr8:38008450..38008459,-#_4a73d32d5dc486376c7f1ab9e2654c99p4@STAR
7.55e-10FFCP PHASE1:Hg19::chr22:25091967..25092006,-#_3aa6ffca6fbfd5cdd389af260d7100b2p@chr22:25091967..25092006, -
7.55e-10FFCP PHASE2:Hg19::chr22:25091967..25092006,-#_3aa6ffca6fbfd5cdd389af260d7100b2p@chr22:25091967..25092006, -
7.98e-10FFCP PHASE2:Hg19::chr14:92414271..92414293,-#_80d79100add6090602bb114d900f2f7ap21@FBLN5
7.98e-10FFCP PHASE1:Hg19::chr14:92414271..92414293,-#_80d79100add6090602bb114d900f2f7ap21@FBLN5

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