DOID:3347

Name:	osteosarcoma
Namespace:	FANTOM
Xrefs:	Expandlinks: MSH:D012516 NCI:C9145 OMIM:259500 SNOMEDCT_2010_1_31:189878003 SNOMEDCT_2010_1_31:21708004 SNOMEDCT_2010_1_31:307576001 SNOMEDCT_2010_1_31:408387006 UMLS_CUI:C0029463 UMLS_CUI:C0206639
Synonyms:	"bone tissue neoplasm" EXACT [] "Osteogenic sarcoma" EXACT [NCI2004_11_17:C9145] "osteoid sarcoma" EXACT [CSP2005:2019-1578] "osteosarcoma" EXACT [MTH:NOCODE] "Osteosarcoma - disorder" EXACT [SNOMEDCT_2005_07_31:307576001] "Osteosarcoma - disorder" EXACT [SNOMEDCT_2005_07_31:408387006] "Osteosarcoma, no ICD-O subtype (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:21708004] "Skeletal sarcoma" EXACT [NCI2004_11_17:C9312]
Comments:	OMIM mapping confirmed by DO. [SN].
Alt_id:	DOID:183

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

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Parents

is_a:	DOID:201(connective tissue cancer)

Children

is a:	FF:10510-107D6 (osteosarcoma cell line:143B/TK^(-)neo^(R))

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

• 10510-107D6 (osteosarcoma cell line:143B/TK^(-)neo^(R))

Mouse (Mus musculus)

• 10510-107D6 (osteosarcoma cell line:143B/TK^(-)neo^(R))

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3347 (osteosarcoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

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P-value	FFCP	Short description

P-value	FFCP	Short description
5.42e-195	FFCP PHASE2:Hg19::chr18:26425339..26425342,+	p@chr18:26425339..26425342, +
5.42e-195	FFCP PHASE1:Hg19::chr18:26425339..26425342,+	p@chr18:26425339..26425342, +
2.55e-98	FFCP PHASE2:Hg19::chr14:62394022..62394029,+	p@chr14:62394022..62394029, +
2.55e-98	FFCP PHASE1:Hg19::chr14:62394022..62394029,+	p@chr14:62394022..62394029, +
2.55e-98	FFCP PHASE2:Hg19::chr2:30864583..30864594,+	p18@LCLAT1
2.55e-98	FFCP PHASE1:Hg19::chr2:30864583..30864594,+	p18@LCLAT1
2.39e-66	FFCP PHASE2:Hg19::chr19:5435171..5435175,+	p@chr19:5435171..5435175, +
2.39e-66	FFCP PHASE1:Hg19::chr19:5435171..5435175,+	p@chr19:5435171..5435175, +
2.39e-66	FFCP PHASE2:Hg19::chr3:5372381..5372394,+	p@chr3:5372381..5372394, +
2.39e-66	FFCP PHASE1:Hg19::chr3:5372381..5372394,+	p@chr3:5372381..5372394, +
4.66e-66	FFCP PHASE2:Hg19::chr1:186925361..186925368,+	p@chr1:186925361..186925368, +
4.66e-66	FFCP PHASE1:Hg19::chr1:186925361..186925368,+	p@chr1:186925361..186925368, +
4.66e-66	FFCP PHASE2:Hg19::chr4:3344434..3344441,+	p@chr4:3344434..3344441, +
4.66e-66	FFCP PHASE1:Hg19::chr4:3344434..3344441,+	p@chr4:3344434..3344441, +
1.46e-50	FFCP PHASE2:Hg19::chr20:57197951..57197958,+	p@chr20:57197951..57197958, +
1.46e-50	FFCP PHASE1:Hg19::chr20:57197951..57197958,+	p@chr20:57197951..57197958, +
1.46e-50	FFCP PHASE2:Hg19::chrX:103498992..103499001,-	p@chrX:103498992..103499001, -
1.46e-50	FFCP PHASE1:Hg19::chrX:103498992..103499001,-	p@chrX:103498992..103499001, -
1.46e-50	FFCP PHASE2:Hg19::chr5:311353..311361,+	p@chr5:311353..311361, +
1.46e-50	FFCP PHASE1:Hg19::chr5:311353..311361,+	p@chr5:311353..311361, +
2.42e-50	FFCP PHASE2:Hg19::chr14:62583348..62583354,+	p3@FLJ43390
2.42e-50	FFCP PHASE1:Hg19::chr14:62583348..62583354,+	p3@FLJ43390
3.99e-50	FFCP PHASE2:Hg19::chr8:123580943..123580958,-	p@chr8:123580943..123580958, -
3.99e-50	FFCP PHASE1:Hg19::chr8:123580943..123580958,-	p@chr8:123580943..123580958, -
6.58e-50	FFCP PHASE2:Hg19::chr10:130077036..130077085,+	p@chr10:130077036..130077085, +
6.58e-50	FFCP PHASE1:Hg19::chr10:130077036..130077085,+	p@chr10:130077036..130077085, +
6.58e-50	FFCP PHASE2:Hg19::chr2:153382316..153382323,+	p@chr2:153382316..153382323, +
6.58e-50	FFCP PHASE1:Hg19::chr2:153382316..153382323,+	p@chr2:153382316..153382323, +
6.58e-50	FFCP PHASE2:Hg19::chr15:90017749..90017754,+	p@chr15:90017749..90017754, +
6.58e-50	FFCP PHASE1:Hg19::chr15:90017749..90017754,+	p@chr15:90017749..90017754, +
6.58e-50	FFCP PHASE2:Hg19::chr9:87024210..87024217,+	p@chr9:87024210..87024217, +
6.58e-50	FFCP PHASE1:Hg19::chr9:87024210..87024217,+	p@chr9:87024210..87024217, +
6.62e-41	FFCP PHASE2:Hg19::chr2:3870539..3870544,+	p@chr2:3870539..3870544, +
6.62e-41	FFCP PHASE1:Hg19::chr2:3870539..3870544,+	p@chr2:3870539..3870544, +
9.91e-41	FFCP PHASE2:Hg19::chr3:185764595..185764606,-	p@chr3:185764595..185764606, -
9.91e-41	FFCP PHASE1:Hg19::chr3:185764595..185764606,-	p@chr3:185764595..185764606, -
1.48e-40	FFCP PHASE2:Hg19::chr3:6221525..6221536,-	p@chr3:6221525..6221536, -
1.48e-40	FFCP PHASE1:Hg19::chr3:6221525..6221536,-	p@chr3:6221525..6221536, -
2.21e-40	FFCP PHASE1:Hg19::chr17:8007027..8007033,-	p@chr17:8007027..8007033, -
2.21e-40	FFCP PHASE2:Hg19::chr22:44807732..44807767,-	p@chr22:44807732..44807767, -
2.21e-40	FFCP PHASE1:Hg19::chr22:44807732..44807767,-	p@chr22:44807732..44807767, -
2.21e-40	FFCP PHASE2:Hg19::chr17:8007027..8007033,-	p@chr17:8007027..8007033, -
3.3e-40	FFCP PHASE2:Hg19::chr1:15668240..15668263,+	p10@FHAD1
3.3e-40	FFCP PHASE1:Hg19::chr1:15668240..15668263,+	p10@FHAD1
3.3e-40	FFCP PHASE2:Hg19::chr20:49948180..49948199,-	p@chr20:49948180..49948199, -
3.3e-40	FFCP PHASE1:Hg19::chr20:49948180..49948199,-	p@chr20:49948180..49948199, -
1.84e-34	FFCP PHASE2:Hg19::chr14:62394467..62394477,+	p@chr14:62394467..62394477, +
1.84e-34	FFCP PHASE1:Hg19::chr14:62394467..62394477,+	p@chr14:62394467..62394477, +
3.61e-34	FFCP PHASE2:Hg19::chr10:104417630..104417634,+	p24@TRIM8
3.61e-34	FFCP PHASE2:Hg19::chr2:36806022..36806034,-	p20@FEZ2
3.61e-34	FFCP PHASE1:Hg19::chr2:36806022..36806034,-	p20@FEZ2
3.61e-34	FFCP PHASE2:Hg19::chr15:29451653..29451657,-	p@chr15:29451653..29451657, -
3.61e-34	FFCP PHASE1:Hg19::chr15:29451653..29451657,-	p@chr15:29451653..29451657, -
3.61e-34	FFCP PHASE1:Hg19::chr10:104417630..104417634,+	p24@TRIM8
9.99e-30	FFCP PHASE2:Hg19::chr2:207848375..207848377,-	p@chr2:207848375..207848377, -
9.99e-30	FFCP PHASE1:Hg19::chr2:207848375..207848377,-	p@chr2:207848375..207848377, -
1.33e-29	FFCP PHASE2:Hg19::chr3:185541195..185541206,-	p13@IGF2BP2
1.33e-29	FFCP PHASE1:Hg19::chr3:185541195..185541206,-	p13@IGF2BP2
1.33e-29	FFCP PHASE2:Hg19::chr14:50234971..50234978,+	p10@KLHDC2
1.33e-29	FFCP PHASE2:Hg19::chr21:39724241..39724253,+	p@chr21:39724241..39724253, +
1.33e-29	FFCP PHASE1:Hg19::chr14:50234971..50234978,+	p10@KLHDC2
1.33e-29	FFCP PHASE1:Hg19::chr21:39724241..39724253,+	p@chr21:39724241..39724253, +
1.33e-29	FFCP PHASE2:Hg19::chr1:186946659..186946664,+	p@chr1:186946659..186946664, +
1.33e-29	FFCP PHASE1:Hg19::chr1:186946659..186946664,+	p@chr1:186946659..186946664, +
2.37e-29	FFCP PHASE2:Hg19::chr3:87841697..87841709,+	p@chr3:87841697..87841709, +
2.37e-29	FFCP PHASE1:Hg19::chr3:87841697..87841709,+	p@chr3:87841697..87841709, +
3.16e-29	FFCP PHASE2:Hg19::chr1:161392010..161392029,+	p@chr1:161392010..161392029, +
3.16e-29	FFCP PHASE1:Hg19::chr1:161392010..161392029,+	p@chr1:161392010..161392029, +
2.16e-26	FFCP PHASE2:Hg19::chr17:38174999..38175001,+	p8@CASC3
2.16e-26	FFCP PHASE1:Hg19::chr17:38174999..38175001,+	p8@CASC3
2.78e-26	FFCP PHASE2:Hg19::chr22:39415641..39415647,+	p@chr22:39415641..39415647, +
2.78e-26	FFCP PHASE1:Hg19::chr22:39415641..39415647,+	p@chr22:39415641..39415647, +
3.58e-26	FFCP PHASE2:Hg19::chr7:27205066..27205067,-	p7@HOXA9
3.58e-26	FFCP PHASE1:Hg19::chr7:27205066..27205067,-	p7@HOXA9
3.58e-26	FFCP PHASE2:Hg19::chr16:56648572..56648582,-	p@chr16:56648572..56648582, -
3.58e-26	FFCP PHASE1:Hg19::chr16:56648572..56648582,-	p@chr16:56648572..56648582, -
4.61e-26	FFCP PHASE2:Hg19::chr3:54945400..54945403,+	p@chr3:54945400..54945403, +
4.61e-26	FFCP PHASE1:Hg19::chr3:54945400..54945403,+	p@chr3:54945400..54945403, +
4.61e-26	FFCP PHASE2:Hg19::chr3:55178388..55178399,-	p@chr3:55178388..55178399, -
4.61e-26	FFCP PHASE1:Hg19::chr3:55178388..55178399,-	p@chr3:55178388..55178399, -
5.93e-26	FFCP PHASE1:Hg19::chr10:124907798..124907817,+	p3@HMX2
5.93e-26	FFCP PHASE2:Hg19::chr16:24842180..24842181,+	p@chr16:24842180..24842181, +
5.93e-26	FFCP PHASE2:Hg19::chr13:107029084..107029103,+	p4@LINC00460
5.93e-26	FFCP PHASE1:Hg19::chr16:24842180..24842181,+	p@chr16:24842180..24842181, +
5.93e-26	FFCP PHASE1:Hg19::chr7:150864780..150864785,-	p1@GBX1
5.93e-26	FFCP PHASE2:Hg19::chr9:21468453..21468457,-	p@chr9:21468453..21468457, -
5.93e-26	FFCP PHASE1:Hg19::chr13:107029084..107029103,+	p4@LINC00460
5.93e-26	FFCP PHASE2:Hg19::chr8:66556795..66556830,+	p3@MTFR1
5.93e-26	FFCP PHASE1:Hg19::chr9:21468453..21468457,-	p@chr9:21468453..21468457, -
5.93e-26	FFCP PHASE2:Hg19::chr7:28726088..28726091,-	p@chr7:28726088..28726091, -
5.93e-26	FFCP PHASE1:Hg19::chr8:66556795..66556830,+	p3@MTFR1
5.93e-26	FFCP PHASE1:Hg19::chr7:28726088..28726091,-	p@chr7:28726088..28726091, -
5.93e-26	FFCP PHASE2:Hg19::chr10:124907798..124907817,+	p3@HMX2
5.93e-26	FFCP PHASE2:Hg19::chr7:150864780..150864785,-	p1@GBX1
7.62e-26	FFCP PHASE2:Hg19::chr2:36806197..36806224,-	p11@FEZ2
7.62e-26	FFCP PHASE1:Hg19::chr2:36806197..36806224,-	p11@FEZ2
7.62e-26	FFCP PHASE2:Hg19::chr4:45735833..45735846,-	p@chr4:45735833..45735846, -
7.62e-26	FFCP PHASE2:Hg19::chr21:38071760..38071776,+	p5@SIM2
7.62e-26	FFCP PHASE1:Hg19::chr4:45735833..45735846,-	p@chr4:45735833..45735846, -
7.62e-26	FFCP PHASE2:Hg19::chr2:153382238..153382249,+	p@chr2:153382238..153382249, +

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