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DOID:201

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Name:connective tissue cancer
Namespace:FANTOM
Definition:"A musculoskeletal system cancer that is located_in connective tissue." [url:http://en.wikipedia.org/wiki/Connective_tissue]
Xrefs:
links:

MSH:D009372
SNOMEDCT_2010_1_31:126598008
SNOMEDCT_2010_1_31:254821003

UMLS_CUI:C0027656
Synonyms: "connective tissue neoplasm" EXACT [CSP2005:2008-3809]
"neoplasm of connective tissues (disorder)" EXACT [SNOMEDCT_2005_07_31:126598008]
"Tumour of connective tissue" EXACT [SNOMEDCT_2005_07_31:254821003]

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:DOID:0060100(musculoskeletal system cancer)



Children


is a:DOID:200 (giant cell tumor),DOID:3347 (osteosarcoma),DOID:3355 (fibrosarcoma),DOID:3371 (chondrosarcoma),DOID:3939 (lipomatous cancer),DOID:4231 (histiocytoma)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

Mouse (Mus musculus)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:201 (connective tissue cancer), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
4.27e-34FFCP PHASE2:Hg19::chr3:2141982..2141990,+#_8ecbf1d24e09ee5b2b3545dd0b85df3dp16@CNTN4
4.27e-34FFCP PHASE1:Hg19::chr4:72897846..72897853,+#_8ecbf1d24e09ee5b2b3545dd0b85df3dp7@NPFFR2
4.27e-34FFCP PHASE1:Hg19::chr9:18504821..18504825,+#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr9:18504821..18504825, +
4.27e-34FFCP PHASE1:Hg19::chr3:2141993..2142006,+#_8ecbf1d24e09ee5b2b3545dd0b85df3dp6@CNTN4
4.27e-34FFCP PHASE1:Hg19::chr5:33361438..33361453,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr5:33361438..33361453, -
4.27e-34FFCP PHASE2:Hg19::chr6:152589345..152589353,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp63@SYNE1
4.27e-34FFCP PHASE1:Hg19::chr4:139817573..139817580,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr4:139817573..139817580, -
4.27e-34FFCP PHASE1:Hg19::chrX:591202..591211,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chrX:591202..591211, -
4.27e-34FFCP PHASE1:Hg19::chr3:2141775..2141783,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr3:2141775..2141783, -
4.27e-34FFCP PHASE2:Hg19::chr6:150735319..150735330,+#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr6:150735319..150735330, +
4.27e-34FFCP PHASE2:Hg19::chr1:145473297..145473306,+#_8ecbf1d24e09ee5b2b3545dd0b85df3dp7@AB464458
4.27e-34FFCP PHASE1:Hg19::chr13:23733790..23733815,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr13:23733790..23733815, -
4.27e-34FFCP PHASE1:Hg19::chr6:150735340..150735361,+#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr6:150735340..150735361, +
4.27e-34FFCP PHASE2:Hg19::chr1:192407879..192407891,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr1:192407879..192407891, -
4.27e-34FFCP PHASE1:Hg19::chr3:1577628..1577634,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr3:1577628..1577634, -
4.27e-34FFCP PHASE2:Hg19::chr5:128083931..128083952,+#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr5:128083931..128083952, +
4.27e-34FFCP PHASE2:Hg19::chr14:88338702..88338713,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp1@ENST00000554305
4.27e-34FFCP PHASE2:Hg19::chr12:71031310..71031321,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp14@PTPRB
4.27e-34FFCP PHASE2:Hg19::chr7:79999046..79999051,+#_8ecbf1d24e09ee5b2b3545dd0b85df3dp41@CD36
4.27e-34FFCP PHASE2:Hg19::chr6:109702786..109702795,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp21@CD164
4.27e-34FFCP PHASE1:Hg19::chr13:23169005..23169009,+#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr13:23169005..23169009, +
4.27e-34FFCP PHASE2:Hg19::chr4:169935485..169935488,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr4:169935485..169935488, -
4.27e-34FFCP PHASE2:Hg19::chr3:1577586..1577600,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr3:1577586..1577600, -
4.27e-34FFCP PHASE2:Hg19::chr13:23733478..23733489,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr13:23733478..23733489, -
4.27e-34FFCP PHASE1:Hg19::chr1:172009977..172009985,+#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr1:172009977..172009985, +
4.27e-34FFCP PHASE2:Hg19::chr18:22251696..22251702,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr18:22251696..22251702, -
4.27e-34FFCP PHASE1:Hg19::chr6:152590257..152590288,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr6:152590257..152590288, -
4.27e-34FFCP PHASE1:Hg19::chr12:70351934..70351939,+#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr12:70351934..70351939, +
4.27e-34FFCP PHASE2:Hg19::chr14:87689429..87689432,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr14:87689429..87689432, -
4.27e-34FFCP PHASE2:Hg19::chr12:70351971..70351975,+#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr12:70351971..70351975, +
4.27e-34FFCP PHASE1:Hg19::chr5:109694595..109694599,+#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr5:109694595..109694599, +
4.27e-34FFCP PHASE1:Hg19::chr18:74961699..74961708,+#_8ecbf1d24e09ee5b2b3545dd0b85df3dp5@GALR1
4.27e-34FFCP PHASE1:Hg19::chr10:63700017..63700022,+#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr10:63700017..63700022, +
4.27e-34FFCP PHASE2:Hg19::chr20:36848135..36848142,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr20:36848135..36848142, -
4.27e-34FFCP PHASE2:Hg19::chr10:63700017..63700022,+#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr10:63700017..63700022, +
4.27e-34FFCP PHASE1:Hg19::chr3:30570717..30570723,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr3:30570717..30570723, -
4.27e-34FFCP PHASE1:Hg19::chr15:96181421..96181428,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr15:96181421..96181428, -
4.27e-34FFCP PHASE1:Hg19::chr1:154942216..154942223,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr1:154942216..154942223, -
4.27e-34FFCP PHASE2:Hg19::chr6:152590052..152590068,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr6:152590052..152590068, -
4.27e-34FFCP PHASE1:Hg19::chr3:157221979..157222025,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr3:157221979..157222025, -
4.27e-34FFCP PHASE2:Hg19::chr9:13006722..13006729,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr9:13006722..13006729, -
4.27e-34FFCP PHASE2:Hg19::chr3:2141851..2141858,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr3:2141851..2141858, -
4.27e-34FFCP PHASE2:Hg19::chr2:206927691..206927699,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr2:206927691..206927699, -
4.27e-34FFCP PHASE1:Hg19::chr3:2140207..2140208,+#_8ecbf1d24e09ee5b2b3545dd0b85df3dp34@CNTN4
4.27e-34FFCP PHASE1:Hg19::chr10:33244066..33244083,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr10:33244066..33244083, -
4.27e-34FFCP PHASE2:Hg19::chr18:74535888..74535894,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr18:74535888..74535894, -
4.27e-34FFCP PHASE2:Hg19::chr10:33244066..33244083,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr10:33244066..33244083, -
4.27e-34FFCP PHASE1:Hg19::chr3:2141862..2141887,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr3:2141862..2141887, -
4.27e-34FFCP PHASE1:Hg19::chr12:80818259..80818266,+#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr12:80818259..80818266, +
4.27e-34FFCP PHASE2:Hg19::chr15:95751475..95751482,+#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr15:95751475..95751482, +
4.27e-34FFCP PHASE2:Hg19::chr12:95941674..95941679,+#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr12:95941674..95941679, +
4.27e-34FFCP PHASE1:Hg19::chr7:18439468..18439477,+#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr7:18439468..18439477, +
4.27e-34FFCP PHASE1:Hg19::chr1:43637641..43637648,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp16@EBNA1BP2
4.27e-34FFCP PHASE1:Hg19::chr11:30252646..30252648,+#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr11:30252646..30252648, +
4.27e-34FFCP PHASE2:Hg19::chr6:152589245..152589256,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp53@SYNE1
4.27e-34FFCP PHASE2:Hg19::chr11:30252646..30252648,+#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr11:30252646..30252648, +
4.27e-34FFCP PHASE1:Hg19::chrX:135338397..135338402,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chrX:135338397..135338402, -
4.27e-34FFCP PHASE1:Hg19::chr3:127441501..127441504,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp59@MGLL
4.27e-34FFCP PHASE2:Hg19::chr3:2140149..2140157,+#_8ecbf1d24e09ee5b2b3545dd0b85df3dp25@CNTN4
4.27e-34FFCP PHASE2:Hg19::chr15:33381289..33381339,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr15:33381289..33381339, -
4.27e-34FFCP PHASE1:Hg19::chr1:228783266..228783269,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr1:228783266..228783269, -
4.27e-34FFCP PHASE2:Hg19::chr7:94540075..94540082,+#_8ecbf1d24e09ee5b2b3545dd0b85df3dp21@PPP1R9A
4.27e-34FFCP PHASE2:Hg19::chr3:170537826..170537835,+#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr3:170537826..170537835, +
4.27e-34FFCP PHASE1:Hg19::chr8:107074411..107074421,+#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr8:107074411..107074421, +
4.27e-34FFCP PHASE1:Hg19::chr12:46884845..46884851,+#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr12:46884845..46884851, +
4.27e-34FFCP PHASE1:Hg19::chr6:152792957..152792960,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr6:152792957..152792960, -
4.27e-34FFCP PHASE1:Hg19::chr2:175629357..175629367,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp6@CHRNA1
4.27e-34FFCP PHASE1:Hg19::chr14:83319766..83319776,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr14:83319766..83319776, -
4.27e-34FFCP PHASE2:Hg19::chr14:88282738..88282741,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp1@ENST00000554519
4.27e-34FFCP PHASE1:Hg19::chr6:96913362..96913393,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr6:96913362..96913393, -
4.27e-34FFCP PHASE1:Hg19::chr19:41281630..41281644,+#_8ecbf1d24e09ee5b2b3545dd0b85df3dp6@RAB4B
4.27e-34FFCP PHASE2:Hg19::chr19:56047669..56047674,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp7@SBK2
4.27e-34FFCP PHASE1:Hg19::chr13:23027882..23027888,+#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr13:23027882..23027888, +
4.27e-34FFCP PHASE1:Hg19::chr1:158989981..158989988,+#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr1:158989981..158989988, +
4.27e-34FFCP PHASE1:Hg19::chr3:157231406..157231414,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr3:157231406..157231414, -
4.27e-34FFCP PHASE2:Hg19::chr4:72897846..72897853,+#_8ecbf1d24e09ee5b2b3545dd0b85df3dp7@NPFFR2
4.27e-34FFCP PHASE1:Hg19::chr6:152589396..152589401,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp68@SYNE1
4.27e-34FFCP PHASE2:Hg19::chr9:18504821..18504825,+#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr9:18504821..18504825, +
4.27e-34FFCP PHASE2:Hg19::chr3:2141993..2142006,+#_8ecbf1d24e09ee5b2b3545dd0b85df3dp6@CNTN4
4.27e-34FFCP PHASE2:Hg19::chr5:33361438..33361453,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr5:33361438..33361453, -
4.27e-34FFCP PHASE2:Hg19::chr4:139817573..139817580,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr4:139817573..139817580, -
4.27e-34FFCP PHASE1:Hg19::chr4:139817600..139817609,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr4:139817600..139817609, -
4.27e-34FFCP PHASE1:Hg19::chr1:192408018..192408032,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr1:192408018..192408032, -
4.27e-34FFCP PHASE2:Hg19::chr3:2141775..2141783,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr3:2141775..2141783, -
4.27e-34FFCP PHASE1:Hg19::chr3:196296715..196296737,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr3:196296715..196296737, -
4.27e-34FFCP PHASE1:Hg19::chr3:2141785..2141802,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr3:2141785..2141802, -
4.27e-34FFCP PHASE2:Hg19::chr12:89917192..89917200,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr12:89917192..89917200, -
4.27e-34FFCP PHASE1:Hg19::chr1:112916133..112916138,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr1:112916133..112916138, -
4.27e-34FFCP PHASE1:Hg19::chr11:30105969..30105977,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp1@ENST00000527819
4.27e-34FFCP PHASE2:Hg19::chr6:150735340..150735361,+#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr6:150735340..150735361, +
4.27e-34FFCP PHASE2:Hg19::chr11:30105969..30105977,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp1@ENST00000527819
4.27e-34FFCP PHASE1:Hg19::chrX:135338270..135338275,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chrX:135338270..135338275, -
4.27e-34FFCP PHASE1:Hg19::chr3:99680705..99680734,+#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr3:99680705..99680734, +
4.27e-34FFCP PHASE2:Hg19::chrX:591202..591211,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chrX:591202..591211, -
4.27e-34FFCP PHASE1:Hg19::chr6:150740842..150740854,+#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr6:150740842..150740854, +
4.27e-34FFCP PHASE2:Hg19::chr1:192407901..192407907,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr1:192407901..192407907, -
4.27e-34FFCP PHASE1:Hg19::chr2:188420455..188420469,+#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr2:188420455..188420469, +
4.27e-34FFCP PHASE1:Hg19::chr12:71031310..71031321,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp14@PTPRB
4.27e-34FFCP PHASE2:Hg19::chr12:71031325..71031332,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp19@PTPRB
4.27e-34FFCP PHASE2:Hg19::chr3:1577628..1577634,-#_8ecbf1d24e09ee5b2b3545dd0b85df3dp@chr3:1577628..1577634, -