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DOID:3905

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Name:lung carcinoma
Namespace:FANTOM
Definition:"A lung cancer that is located_in the lungs and has_symptom cough and has_symptom chest discomfort or pain and has_symptom weight loss and has_symptom hemoptysis." [url:https://merck.com/mmpe/sec05/ch062/ch062b.html]
Xrefs:
links:

NCI:C4878
OMIM:211980
SNOMEDCT_2010_1_31:154485001
SNOMEDCT_2010_1_31:187875007
SNOMEDCT_2010_1_31:269561006

UMLS_CUI:C0684249
Synonyms: "cancer of lung" EXACT [NCI2004_11_17:C4878]
"carcinoma OF LUNG" EXACT [MTH:460]
"carcinoma of lung" RELATED []
"lung carcinoma" EXACT [SNOMEDCT_2005_07_31:269561006]
"lung carcinoma" EXACT [SNOMEDCT_2005_07_31:154485001]
Comments:OMIM mapping confirmed by DO. [SN].

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:1324(lung cancer)



Children


is a:DOID:3908 (non-small cell lung carcinoma),DOID:5409 (lung small cell carcinoma)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3905 (lung carcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
9.75e-45FFCP PHASE1:Hg19::chr6:45399294..45399301,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399294..45399301, +
9.75e-45FFCP PHASE1:Hg19::chr6:125378873..125378876,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:125378873..125378876, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399294..45399301,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399294..45399301, +
9.75e-45FFCP PHASE2:Hg19::chr6:125378873..125378876,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:125378873..125378876, +
9.75e-45FFCP PHASE1:Hg19::chr6:45405332..45405343,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405332..45405343, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399245..45399258,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399245..45399258, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399533..45399540,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399533..45399540, +
9.75e-45FFCP PHASE1:Hg19::chr6:45405393..45405412,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405393..45405412, +
9.75e-45FFCP PHASE2:Hg19::chr6:45405332..45405343,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405332..45405343, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399263..45399274,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399263..45399274, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399245..45399258,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399245..45399258, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399533..45399540,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399533..45399540, +
9.75e-45FFCP PHASE2:Hg19::chr6:45405393..45405412,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405393..45405412, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399263..45399274,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399263..45399274, +
4.35e-40FFCP PHASE1:Hg19::chr6:73785930..73785949,-#_63c78ab1a3b8986f5f523383f41275dcp@chr6:73785930..73785949, -
4.35e-40FFCP PHASE2:Hg19::chr6:73785930..73785949,-#_63c78ab1a3b8986f5f523383f41275dcp@chr6:73785930..73785949, -
2.66e-30FFCP PHASE1:Hg19::chr8:40525350..40525354,-#_731a82d29cb8eb0e261f77134811de1ep@chr8:40525350..40525354, -
2.66e-30FFCP PHASE1:Hg19::chr6:45399724..45399733,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399724..45399733, +
2.66e-30FFCP PHASE2:Hg19::chr8:40525350..40525354,-#_731a82d29cb8eb0e261f77134811de1ep@chr8:40525350..40525354, -
2.66e-30FFCP PHASE1:Hg19::chr6:45399422..45399430,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399422..45399430, +
2.66e-30FFCP PHASE1:Hg19::chr6:73786593..73786601,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786593..73786601, +
2.66e-30FFCP PHASE1:Hg19::chr13:70823810..70823813,+#_731a82d29cb8eb0e261f77134811de1ep@chr13:70823810..70823813, +
2.66e-30FFCP PHASE2:Hg19::chr6:45399724..45399733,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399724..45399733, +
2.66e-30FFCP PHASE1:Hg19::chr5:92526866..92526914,-#_731a82d29cb8eb0e261f77134811de1ep@chr5:92526866..92526914, -
2.66e-30FFCP PHASE2:Hg19::chr6:45399422..45399430,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399422..45399430, +
2.66e-30FFCP PHASE1:Hg19::chr6:73786620..73786627,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786620..73786627, +
2.66e-30FFCP PHASE2:Hg19::chr13:70823810..70823813,+#_731a82d29cb8eb0e261f77134811de1ep@chr13:70823810..70823813, +
2.66e-30FFCP PHASE2:Hg19::chr6:73786593..73786601,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786593..73786601, +
2.66e-30FFCP PHASE2:Hg19::chr5:92526866..92526914,-#_731a82d29cb8eb0e261f77134811de1ep@chr5:92526866..92526914, -
2.66e-30FFCP PHASE2:Hg19::chr6:73786620..73786627,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786620..73786627, +
3.09e-30FFCP PHASE2:Hg19::chr18:10085554..10085562,+#_6ab758267c516e266b3cc84006025e3ap@chr18:10085554..10085562, +
3.09e-30FFCP PHASE1:Hg19::chr18:10085554..10085562,+#_6ab758267c516e266b3cc84006025e3ap@chr18:10085554..10085562, +
3.59e-30FFCP PHASE2:Hg19::chr1:156779602..156779619,-#_b0a10e90ac2aa3a790fb9716f2bbd976p@chr1:156779602..156779619, -
3.59e-30FFCP PHASE1:Hg19::chr1:156779602..156779619,-#_b0a10e90ac2aa3a790fb9716f2bbd976p@chr1:156779602..156779619, -
7.5e-29FFCP PHASE1:Hg19::chr21:37377429..37377443,+#_d0518c616b4f4645db245080ba4c6f03p2@ENST00000457157
7.5e-29FFCP PHASE2:Hg19::chr21:37377429..37377443,+#_d0518c616b4f4645db245080ba4c6f03p2@ENST00000457157
8.14e-26FFCP PHASE1:Hg19::chr4:89282612..89282616,+#_d620c4dda050ed3d00bebc254948b1cep@chr4:89282612..89282616, +
8.14e-26FFCP PHASE2:Hg19::chr4:89282612..89282616,+#_d620c4dda050ed3d00bebc254948b1cep@chr4:89282612..89282616, +
3.17e-25FFCP PHASE2:Hg19::chr14:36982707..36982717,-#_dc0ca4292e777cec68d90532f4c7e584p8@SFTA3
3.17e-25FFCP PHASE1:Hg19::chr14:36982707..36982717,-#_dc0ca4292e777cec68d90532f4c7e584p8@SFTA3
2.62e-23FFCP PHASE1:Hg19::chr13:104517168..104517170,+#_ff13f51a990286586a726a44f2e602cap@chr13:104517168..104517170, +
2.62e-23FFCP PHASE2:Hg19::chr8:97961449..97961460,-#_ff13f51a990286586a726a44f2e602cap@chr8:97961449..97961460, -
2.62e-23FFCP PHASE2:Hg19::chr3:150914192..150914197,+#_ff13f51a990286586a726a44f2e602cap@chr3:150914192..150914197, +
2.62e-23FFCP PHASE2:Hg19::chr1:181360920..181360925,+#_ff13f51a990286586a726a44f2e602cap@chr1:181360920..181360925, +
2.62e-23FFCP PHASE2:Hg19::chr13:76755731..76755739,+#_ff13f51a990286586a726a44f2e602cap@chr13:76755731..76755739, +
2.62e-23FFCP PHASE1:Hg19::chr6:31681859..31681865,-#_ff13f51a990286586a726a44f2e602cap3@LY6G6E
2.62e-23FFCP PHASE1:Hg19::chr3:63805044..63805054,+#_ff13f51a990286586a726a44f2e602cap1@C3orf49
2.62e-23FFCP PHASE1:Hg19::chr17:39140393..39140399,-#_ff13f51a990286586a726a44f2e602cap3@KRT40
2.62e-23FFCP PHASE1:Hg19::chr15:91143571..91143582,+#_ff13f51a990286586a726a44f2e602cap@chr15:91143571..91143582, +
2.62e-23FFCP PHASE2:Hg19::chr7:44574327..44574332,-#_ff13f51a990286586a726a44f2e602cap@chr7:44574327..44574332, -
2.62e-23FFCP PHASE2:Hg19::chr5:134920622..134920655,+#_ff13f51a990286586a726a44f2e602cap@chr5:134920622..134920655, +
2.62e-23FFCP PHASE2:Hg19::chr16:7411388..7411391,+#_ff13f51a990286586a726a44f2e602cap@chr16:7411388..7411391, +
2.62e-23FFCP PHASE1:Hg19::chr10:101690855..101690861,-#_ff13f51a990286586a726a44f2e602cap14@DNMBP
2.62e-23FFCP PHASE1:Hg19::chr6:64762702..64762707,+#_ff13f51a990286586a726a44f2e602cap@chr6:64762702..64762707, +
2.62e-23FFCP PHASE1:Hg19::chr4:160189282..160189289,+#_ff13f51a990286586a726a44f2e602cap38@RAPGEF2
2.62e-23FFCP PHASE1:Hg19::chr20:2779313..2779314,-#_ff13f51a990286586a726a44f2e602cap16@CPXM1
2.62e-23FFCP PHASE2:Hg19::chr8:54464033..54464036,-#_ff13f51a990286586a726a44f2e602cap@chr8:54464033..54464036, -
2.62e-23FFCP PHASE2:Hg19::chr5:28571958..28571968,-#_ff13f51a990286586a726a44f2e602cap@chr5:28571958..28571968, -
2.62e-23FFCP PHASE2:Hg19::chr4:39301903..39301910,-#_ff13f51a990286586a726a44f2e602cap@chr4:39301903..39301910, -
2.62e-23FFCP PHASE1:Hg19::chr8:38459926..38459928,+#_ff13f51a990286586a726a44f2e602cap@chr8:38459926..38459928, +
2.62e-23FFCP PHASE1:Hg19::chr3:189838995..189839000,-#_ff13f51a990286586a726a44f2e602cap31@LEPREL1
2.62e-23FFCP PHASE1:Hg19::chr1:188856567..188856573,-#_ff13f51a990286586a726a44f2e602cap2@ENST00000414765
2.62e-23FFCP PHASE2:Hg19::chr7:95776285..95776292,-#_ff13f51a990286586a726a44f2e602cap@chr7:95776285..95776292, -
2.62e-23FFCP PHASE2:Hg19::chr3:87647430..87647437,-#_ff13f51a990286586a726a44f2e602cap@chr3:87647430..87647437, -
2.62e-23FFCP PHASE2:Hg19::chr20:13085064..13085070,+#_ff13f51a990286586a726a44f2e602cap@chr20:13085064..13085070, +
2.62e-23FFCP PHASE2:Hg19::chr16:13010590..13010593,+#_ff13f51a990286586a726a44f2e602cap@chr16:13010590..13010593, +
2.62e-23FFCP PHASE2:Hg19::chr12:41194014..41194019,+#_ff13f51a990286586a726a44f2e602cap@chr12:41194014..41194019, +
2.62e-23FFCP PHASE1:Hg19::chr5:79097476..79097484,+#_ff13f51a990286586a726a44f2e602cap@chr5:79097476..79097484, +
2.62e-23FFCP PHASE1:Hg19::chr15:71685918..71685922,-#_ff13f51a990286586a726a44f2e602cap@chr15:71685918..71685922, -
2.62e-23FFCP PHASE2:Hg19::chr7:26657673..26657685,-#_ff13f51a990286586a726a44f2e602cap@chr7:26657673..26657685, -
2.62e-23FFCP PHASE2:Hg19::chr2:138685510..138685520,-#_ff13f51a990286586a726a44f2e602cap@chr2:138685510..138685520, -
2.62e-23FFCP PHASE2:Hg19::chr16:66088105..66088108,-#_ff13f51a990286586a726a44f2e602cap@chr16:66088105..66088108, -
2.62e-23FFCP PHASE2:Hg19::chr14:60194446..60194457,-#_ff13f51a990286586a726a44f2e602cap16@RTN1
2.62e-23FFCP PHASE2:Hg19::chr10:129704512..129704515,+#_ff13f51a990286586a726a44f2e602cap@chr10:129704512..129704515, +
2.62e-23FFCP PHASE1:Hg19::chr2:97626375..97626385,-#_ff13f51a990286586a726a44f2e602cap@chr2:97626375..97626385, -
2.62e-23FFCP PHASE2:Hg19::chrX:135764624..135764645,-#_ff13f51a990286586a726a44f2e602cap@chrX:135764624..135764645, -
2.62e-23FFCP PHASE2:Hg19::chr6:141460346..141460355,+#_ff13f51a990286586a726a44f2e602cap@chr6:141460346..141460355, +
2.62e-23FFCP PHASE1:Hg19::chr3:86929211..86929219,+#_ff13f51a990286586a726a44f2e602cap@chr3:86929211..86929219, +
2.62e-23FFCP PHASE1:Hg19::chr2:103235329..103235342,+#_ff13f51a990286586a726a44f2e602cap@chr2:103235329..103235342, +
2.62e-23FFCP PHASE1:Hg19::chr12:54535470..54535475,+#_ff13f51a990286586a726a44f2e602cap@chr12:54535470..54535475, +
2.62e-23FFCP PHASE2:Hg19::chr8:38441630..38441635,+#_ff13f51a990286586a726a44f2e602cap@chr8:38441630..38441635, +
2.62e-23FFCP PHASE2:Hg19::chr7:79840276..79840283,+#_ff13f51a990286586a726a44f2e602cap@chr7:79840276..79840283, +
2.62e-23FFCP PHASE2:Hg19::chr17:39140411..39140419,-#_ff13f51a990286586a726a44f2e602cap5@KRT40
2.62e-23FFCP PHASE2:Hg19::chr12:84664687..84664694,+#_ff13f51a990286586a726a44f2e602cap4@ENST00000547882
2.62e-23FFCP PHASE1:Hg19::chr6:154710410..154710428,-#_ff13f51a990286586a726a44f2e602cap@chr6:154710410..154710428, -
2.62e-23FFCP PHASE1:Hg19::chr3:150914094..150914095,+#_ff13f51a990286586a726a44f2e602cap@chr3:150914094..150914095, +
2.62e-23FFCP PHASE1:Hg19::chr1:181360250..181360259,+#_ff13f51a990286586a726a44f2e602cap@chr1:181360250..181360259, +
2.62e-23FFCP PHASE2:Hg19::chr11:67402354..67402359,-#_ff13f51a990286586a726a44f2e602cap@chr11:67402354..67402359, -
2.62e-23FFCP PHASE1:Hg19::chr10:129703430..129703445,+#_ff13f51a990286586a726a44f2e602cap@chr10:129703430..129703445, +
2.62e-23FFCP PHASE2:Hg19::chr3:86289712..86289720,+#_ff13f51a990286586a726a44f2e602cap@chr3:86289712..86289720, +
2.62e-23FFCP PHASE2:Hg19::chr3:102635374..102635381,-#_ff13f51a990286586a726a44f2e602cap@chr3:102635374..102635381, -
2.62e-23FFCP PHASE2:Hg19::chr1:81686906..81686911,+#_ff13f51a990286586a726a44f2e602cap@chr1:81686906..81686911, +
2.62e-23FFCP PHASE1:Hg19::chr2:175412075..175412078,+#_ff13f51a990286586a726a44f2e602cap3@uc002uix.1
2.62e-23FFCP PHASE1:Hg19::chr16:7411388..7411391,+#_ff13f51a990286586a726a44f2e602cap@chr16:7411388..7411391, +
2.62e-23FFCP PHASE1:Hg19::chr12:84664700..84664710,+#_ff13f51a990286586a726a44f2e602cap1@ENST00000547882
2.62e-23FFCP PHASE2:Hg19::chr3:145094664..145094665,+#_ff13f51a990286586a726a44f2e602cap@chr3:145094664..145094665, +
2.62e-23FFCP PHASE1:Hg19::chr11:73475071..73475076,-#_ff13f51a990286586a726a44f2e602cap@chr11:73475071..73475076, -
2.62e-23FFCP PHASE2:Hg19::chr18:6928495..6928520,-#_ff13f51a990286586a726a44f2e602cap2@LOC400643
2.62e-23FFCP PHASE2:Hg19::chr7:21209872..21209910,+#_ff13f51a990286586a726a44f2e602cap@chr7:21209872..21209910, +
2.62e-23FFCP PHASE2:Hg19::chr2:135119636..135119642,+#_ff13f51a990286586a726a44f2e602cap@chr2:135119636..135119642, +

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