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DOID:3905

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Name:lung carcinoma
Namespace:FANTOM
Definition:"A lung cancer that is located_in the lungs and has_symptom cough and has_symptom chest discomfort or pain and has_symptom weight loss and has_symptom hemoptysis." [url:https://merck.com/mmpe/sec05/ch062/ch062b.html]
Xrefs:
links:

NCI:C4878
OMIM:211980
SNOMEDCT_2010_1_31:154485001
SNOMEDCT_2010_1_31:187875007
SNOMEDCT_2010_1_31:269561006

UMLS_CUI:C0684249
Synonyms: "cancer of lung" EXACT [NCI2004_11_17:C4878]
"carcinoma OF LUNG" EXACT [MTH:460]
"carcinoma of lung" RELATED []
"lung carcinoma" EXACT [SNOMEDCT_2005_07_31:269561006]
"lung carcinoma" EXACT [SNOMEDCT_2005_07_31:154485001]
Comments:OMIM mapping confirmed by DO. [SN].

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:DOID:1324(lung cancer)



Children


is a:DOID:3908 (non-small cell lung carcinoma),DOID:5409 (lung small cell carcinoma)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3905 (lung carcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
9.75e-45FFCP PHASE2:Hg19::chr6:45405393..45405412,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405393..45405412, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399263..45399274,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399263..45399274, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399294..45399301,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399294..45399301, +
9.75e-45FFCP PHASE1:Hg19::chr6:125378873..125378876,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:125378873..125378876, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399294..45399301,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399294..45399301, +
9.75e-45FFCP PHASE2:Hg19::chr6:125378873..125378876,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:125378873..125378876, +
9.75e-45FFCP PHASE1:Hg19::chr6:45405332..45405343,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405332..45405343, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399245..45399258,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399245..45399258, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399533..45399540,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399533..45399540, +
9.75e-45FFCP PHASE1:Hg19::chr6:45405393..45405412,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405393..45405412, +
9.75e-45FFCP PHASE2:Hg19::chr6:45405332..45405343,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405332..45405343, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399263..45399274,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399263..45399274, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399245..45399258,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399245..45399258, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399533..45399540,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399533..45399540, +
4.35e-40FFCP PHASE1:Hg19::chr6:73785930..73785949,-#_63c78ab1a3b8986f5f523383f41275dcp@chr6:73785930..73785949, -
4.35e-40FFCP PHASE2:Hg19::chr6:73785930..73785949,-#_63c78ab1a3b8986f5f523383f41275dcp@chr6:73785930..73785949, -
2.66e-30FFCP PHASE1:Hg19::chr8:40525350..40525354,-#_731a82d29cb8eb0e261f77134811de1ep@chr8:40525350..40525354, -
2.66e-30FFCP PHASE1:Hg19::chr6:45399724..45399733,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399724..45399733, +
2.66e-30FFCP PHASE2:Hg19::chr8:40525350..40525354,-#_731a82d29cb8eb0e261f77134811de1ep@chr8:40525350..40525354, -
2.66e-30FFCP PHASE1:Hg19::chr6:45399422..45399430,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399422..45399430, +
2.66e-30FFCP PHASE1:Hg19::chr6:73786593..73786601,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786593..73786601, +
2.66e-30FFCP PHASE2:Hg19::chr6:45399724..45399733,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399724..45399733, +
2.66e-30FFCP PHASE1:Hg19::chr5:92526866..92526914,-#_731a82d29cb8eb0e261f77134811de1ep@chr5:92526866..92526914, -
2.66e-30FFCP PHASE1:Hg19::chr13:70823810..70823813,+#_731a82d29cb8eb0e261f77134811de1ep@chr13:70823810..70823813, +
2.66e-30FFCP PHASE2:Hg19::chr6:45399422..45399430,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399422..45399430, +
2.66e-30FFCP PHASE1:Hg19::chr6:73786620..73786627,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786620..73786627, +
2.66e-30FFCP PHASE2:Hg19::chr6:73786593..73786601,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786593..73786601, +
2.66e-30FFCP PHASE2:Hg19::chr13:70823810..70823813,+#_731a82d29cb8eb0e261f77134811de1ep@chr13:70823810..70823813, +
2.66e-30FFCP PHASE2:Hg19::chr5:92526866..92526914,-#_731a82d29cb8eb0e261f77134811de1ep@chr5:92526866..92526914, -
2.66e-30FFCP PHASE2:Hg19::chr6:73786620..73786627,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786620..73786627, +
3.09e-30FFCP PHASE2:Hg19::chr18:10085554..10085562,+#_6ab758267c516e266b3cc84006025e3ap@chr18:10085554..10085562, +
3.09e-30FFCP PHASE1:Hg19::chr18:10085554..10085562,+#_6ab758267c516e266b3cc84006025e3ap@chr18:10085554..10085562, +
3.59e-30FFCP PHASE1:Hg19::chr1:156779602..156779619,-#_b0a10e90ac2aa3a790fb9716f2bbd976p@chr1:156779602..156779619, -
3.59e-30FFCP PHASE2:Hg19::chr1:156779602..156779619,-#_b0a10e90ac2aa3a790fb9716f2bbd976p@chr1:156779602..156779619, -
7.5e-29FFCP PHASE1:Hg19::chr21:37377429..37377443,+#_d0518c616b4f4645db245080ba4c6f03p2@ENST00000457157
7.5e-29FFCP PHASE2:Hg19::chr21:37377429..37377443,+#_d0518c616b4f4645db245080ba4c6f03p2@ENST00000457157
8.14e-26FFCP PHASE1:Hg19::chr4:89282612..89282616,+#_d620c4dda050ed3d00bebc254948b1cep@chr4:89282612..89282616, +
8.14e-26FFCP PHASE2:Hg19::chr4:89282612..89282616,+#_d620c4dda050ed3d00bebc254948b1cep@chr4:89282612..89282616, +
3.17e-25FFCP PHASE2:Hg19::chr14:36982707..36982717,-#_dc0ca4292e777cec68d90532f4c7e584p8@SFTA3
3.17e-25FFCP PHASE1:Hg19::chr14:36982707..36982717,-#_dc0ca4292e777cec68d90532f4c7e584p8@SFTA3
2.62e-23FFCP PHASE2:Hg19::chr14:60194070..60194083,-#_ff13f51a990286586a726a44f2e602cap25@RTN1
2.62e-23FFCP PHASE2:Hg19::chr10:129703430..129703445,+#_ff13f51a990286586a726a44f2e602cap@chr10:129703430..129703445, +
2.62e-23FFCP PHASE2:Hg19::chr8:98103977..98103981,-#_ff13f51a990286586a726a44f2e602cap@chr8:98103977..98103981, -
2.62e-23FFCP PHASE1:Hg19::chr6:45399278..45399287,+#_ff13f51a990286586a726a44f2e602cap@chr6:45399278..45399287, +
2.62e-23FFCP PHASE1:Hg19::chr19:46531064..46531073,+#_ff13f51a990286586a726a44f2e602cap@chr19:46531064..46531073, +
2.62e-23FFCP PHASE2:Hg19::chr12:84126726..84126727,-#_ff13f51a990286586a726a44f2e602cap@chr12:84126726..84126727, -
2.62e-23FFCP PHASE1:Hg19::chr6:141460346..141460355,+#_ff13f51a990286586a726a44f2e602cap@chr6:141460346..141460355, +
2.62e-23FFCP PHASE2:Hg19::chr9:138393225..138393257,+#_ff13f51a990286586a726a44f2e602cap@chr9:138393225..138393257, +
2.62e-23FFCP PHASE2:Hg19::chr3:78360347..78360353,+#_ff13f51a990286586a726a44f2e602cap@chr3:78360347..78360353, +
2.62e-23FFCP PHASE2:Hg19::chr2:97626588..97626595,-#_ff13f51a990286586a726a44f2e602cap@chr2:97626588..97626595, -
2.62e-23FFCP PHASE1:Hg19::chr7:79840276..79840283,+#_ff13f51a990286586a726a44f2e602cap@chr7:79840276..79840283, +
2.62e-23FFCP PHASE1:Hg19::chr7:120381610..120381618,+#_ff13f51a990286586a726a44f2e602cap@chr7:120381610..120381618, +
2.62e-23FFCP PHASE1:Hg19::chr17:39140424..39140431,-#_ff13f51a990286586a726a44f2e602cap4@KRT40
2.62e-23FFCP PHASE2:Hg19::chr9:17454062..17454088,+#_ff13f51a990286586a726a44f2e602cap@chr9:17454062..17454088, +
2.62e-23FFCP PHASE1:Hg19::chr12:84664687..84664694,+#_ff13f51a990286586a726a44f2e602cap4@ENST00000547882
2.62e-23FFCP PHASE2:Hg19::chr2:130564567..130564572,-#_ff13f51a990286586a726a44f2e602cap2@LOC100131048
2.62e-23FFCP PHASE2:Hg19::chr13:26155734..26155742,+#_ff13f51a990286586a726a44f2e602cap@chr13:26155734..26155742, +
2.62e-23FFCP PHASE1:Hg19::chr3:102635374..102635381,-#_ff13f51a990286586a726a44f2e602cap@chr3:102635374..102635381, -
2.62e-23FFCP PHASE1:Hg19::chr2:222160741..222160750,+#_ff13f51a990286586a726a44f2e602cap@chr2:222160741..222160750, +
2.62e-23FFCP PHASE2:Hg19::chr7:26482715..26482738,-#_ff13f51a990286586a726a44f2e602cap@chr7:26482715..26482738, -
2.62e-23FFCP PHASE2:Hg19::chr4:139019174..139019198,-#_ff13f51a990286586a726a44f2e602cap@chr4:139019174..139019198, -
2.62e-23FFCP PHASE2:Hg19::chr2:135169581..135169587,+#_ff13f51a990286586a726a44f2e602cap@chr2:135169581..135169587, +
2.62e-23FFCP PHASE2:Hg19::chrX:105065622..105065627,+#_ff13f51a990286586a726a44f2e602cap@chrX:105065622..105065627, +
2.62e-23FFCP PHASE1:Hg19::chr16:3332452..3332454,+#_ff13f51a990286586a726a44f2e602cap@chr16:3332452..3332454, +
2.62e-23FFCP PHASE2:Hg19::chr8:98015654..98015697,-#_ff13f51a990286586a726a44f2e602cap@chr8:98015654..98015697, -
2.62e-23FFCP PHASE2:Hg19::chr6:125547084..125547089,+#_ff13f51a990286586a726a44f2e602cap@chr6:125547084..125547089, +
2.62e-23FFCP PHASE2:Hg19::chr1:188856590..188856595,-#_ff13f51a990286586a726a44f2e602cap4@ENST00000414765
2.62e-23FFCP PHASE1:Hg19::chr13:25269076..25269105,-#_ff13f51a990286586a726a44f2e602cap@chr13:25269076..25269105, -
2.62e-23FFCP PHASE1:Hg19::chr10:101691056..101691064,-#_ff13f51a990286586a726a44f2e602cap13@DNMBP
2.62e-23FFCP PHASE1:Hg19::chr8:97961686..97961696,-#_ff13f51a990286586a726a44f2e602cap@chr8:97961686..97961696, -
2.62e-23FFCP PHASE1:Hg19::chr6:125378772..125378777,+#_ff13f51a990286586a726a44f2e602cap@chr6:125378772..125378777, +
2.62e-23FFCP PHASE1:Hg19::chr3:150914241..150914244,+#_ff13f51a990286586a726a44f2e602cap@chr3:150914241..150914244, +
2.62e-23FFCP PHASE2:Hg19::chr7:68735026..68735050,+#_ff13f51a990286586a726a44f2e602cap@chr7:68735026..68735050, +
2.62e-23FFCP PHASE1:Hg19::chr12:51116443..51116452,+#_ff13f51a990286586a726a44f2e602cap@chr12:51116443..51116452, +
2.62e-23FFCP PHASE2:Hg19::chr12:75174802..75174809,+#_ff13f51a990286586a726a44f2e602cap@chr12:75174802..75174809, +
2.62e-23FFCP PHASE1:Hg19::chr8:98070371..98070384,-#_ff13f51a990286586a726a44f2e602cap@chr8:98070371..98070384, -
2.62e-23FFCP PHASE1:Hg19::chr4:157516018..157516023,+#_ff13f51a990286586a726a44f2e602cap@chr4:157516018..157516023, +
2.62e-23FFCP PHASE2:Hg19::chrX:48394285..48394295,+#_ff13f51a990286586a726a44f2e602cap@chrX:48394285..48394295, +
2.62e-23FFCP PHASE2:Hg19::chr7:120379758..120379765,+#_ff13f51a990286586a726a44f2e602cap@chr7:120379758..120379765, +
2.62e-23FFCP PHASE2:Hg19::chr2:97626065..97626084,-#_ff13f51a990286586a726a44f2e602cap@chr2:97626065..97626084, -
2.62e-23FFCP PHASE2:Hg19::chr10:66459172..66459188,-#_ff13f51a990286586a726a44f2e602cap@chr10:66459172..66459188, -
2.62e-23FFCP PHASE1:Hg19::chr15:85564362..85564385,+#_ff13f51a990286586a726a44f2e602cap@chr15:85564362..85564385, +
2.62e-23FFCP PHASE2:Hg19::chr7:95766136..95766143,-#_ff13f51a990286586a726a44f2e602cap@chr7:95766136..95766143, -
2.62e-23FFCP PHASE2:Hg19::chr2:222127471..222127478,-#_ff13f51a990286586a726a44f2e602cap@chr2:222127471..222127478, -
2.62e-23FFCP PHASE1:Hg19::chr12:79756320..79756329,-#_ff13f51a990286586a726a44f2e602cap@chr12:79756320..79756329, -
2.62e-23FFCP PHASE2:Hg19::chr2:103235120..103235130,+#_ff13f51a990286586a726a44f2e602cap@chr2:103235120..103235130, +
2.62e-23FFCP PHASE1:Hg19::chr11:86502231..86502240,-#_ff13f51a990286586a726a44f2e602cap@chr11:86502231..86502240, -
2.62e-23FFCP PHASE1:Hg19::chr5:28571974..28571978,-#_ff13f51a990286586a726a44f2e602cap@chr5:28571974..28571978, -
2.62e-23FFCP PHASE1:Hg19::chr2:220594691..220594695,+#_ff13f51a990286586a726a44f2e602cap4@ENST00000442416
2.62e-23FFCP PHASE2:Hg19::chr14:58439259..58439262,-#_ff13f51a990286586a726a44f2e602cap@chr14:58439259..58439262, -
2.62e-23FFCP PHASE2:Hg19::chr11:42142040..42142055,+#_ff13f51a990286586a726a44f2e602cap@chr11:42142040..42142055, +
2.62e-23FFCP PHASE1:Hg19::chr7:158225991..158225999,+#_ff13f51a990286586a726a44f2e602cap@chr7:158225991..158225999, +
2.62e-23FFCP PHASE1:Hg19::chr3:95401565..95401581,-#_ff13f51a990286586a726a44f2e602cap2@ENST00000463799
2.62e-23FFCP PHASE1:Hg19::chr6:31681859..31681865,-#_ff13f51a990286586a726a44f2e602cap3@LY6G6E
2.62e-23FFCP PHASE1:Hg19::chr1:168756303..168756308,+#_ff13f51a990286586a726a44f2e602cap1@MGC4473
2.62e-23FFCP PHASE2:Hg19::chr7:44574327..44574332,-#_ff13f51a990286586a726a44f2e602cap@chr7:44574327..44574332, -
2.62e-23FFCP PHASE2:Hg19::chr5:134920622..134920655,+#_ff13f51a990286586a726a44f2e602cap@chr5:134920622..134920655, +
2.62e-23FFCP PHASE2:Hg19::chr16:7411388..7411391,+#_ff13f51a990286586a726a44f2e602cap@chr16:7411388..7411391, +
2.62e-23FFCP PHASE1:Hg19::chr13:92571252..92571265,-#_ff13f51a990286586a726a44f2e602cap@chr13:92571252..92571265, -
2.62e-23FFCP PHASE1:Hg19::chr10:129704201..129704232,-#_ff13f51a990286586a726a44f2e602cap@chr10:129704201..129704232, -