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DOID:3905

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Name:lung carcinoma
Namespace:FANTOM
Definition:"A lung cancer that is located_in the lungs and has_symptom cough and has_symptom chest discomfort or pain and has_symptom weight loss and has_symptom hemoptysis." [url:https://merck.com/mmpe/sec05/ch062/ch062b.html]
Xrefs:
links:

NCI:C4878
OMIM:211980
SNOMEDCT_2010_1_31:154485001
SNOMEDCT_2010_1_31:187875007
SNOMEDCT_2010_1_31:269561006

UMLS_CUI:C0684249
Synonyms: "cancer of lung" EXACT [NCI2004_11_17:C4878]
"carcinoma OF LUNG" EXACT [MTH:460]
"carcinoma of lung" RELATED []
"lung carcinoma" EXACT [SNOMEDCT_2005_07_31:269561006]
"lung carcinoma" EXACT [SNOMEDCT_2005_07_31:154485001]
Comments:OMIM mapping confirmed by DO. [SN].

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:1324(lung cancer)



Children


is a:DOID:3908 (non-small cell lung carcinoma),DOID:5409 (lung small cell carcinoma)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3905 (lung carcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
9.75e-45FFCP PHASE2:Hg19::chr6:45399245..45399258,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399245..45399258, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399533..45399540,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399533..45399540, +
9.75e-45FFCP PHASE1:Hg19::chr6:125378873..125378876,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:125378873..125378876, +
9.75e-45FFCP PHASE2:Hg19::chr6:45405393..45405412,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405393..45405412, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399263..45399274,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399263..45399274, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399294..45399301,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399294..45399301, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399294..45399301,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399294..45399301, +
9.75e-45FFCP PHASE2:Hg19::chr6:125378873..125378876,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:125378873..125378876, +
9.75e-45FFCP PHASE1:Hg19::chr6:45405332..45405343,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405332..45405343, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399245..45399258,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399245..45399258, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399533..45399540,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399533..45399540, +
9.75e-45FFCP PHASE1:Hg19::chr6:45405393..45405412,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405393..45405412, +
9.75e-45FFCP PHASE2:Hg19::chr6:45405332..45405343,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405332..45405343, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399263..45399274,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399263..45399274, +
4.35e-40FFCP PHASE1:Hg19::chr6:73785930..73785949,-#_63c78ab1a3b8986f5f523383f41275dcp@chr6:73785930..73785949, -
4.35e-40FFCP PHASE2:Hg19::chr6:73785930..73785949,-#_63c78ab1a3b8986f5f523383f41275dcp@chr6:73785930..73785949, -
2.66e-30FFCP PHASE2:Hg19::chr5:92526866..92526914,-#_731a82d29cb8eb0e261f77134811de1ep@chr5:92526866..92526914, -
2.66e-30FFCP PHASE2:Hg19::chr6:73786620..73786627,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786620..73786627, +
2.66e-30FFCP PHASE1:Hg19::chr8:40525350..40525354,-#_731a82d29cb8eb0e261f77134811de1ep@chr8:40525350..40525354, -
2.66e-30FFCP PHASE1:Hg19::chr6:45399724..45399733,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399724..45399733, +
2.66e-30FFCP PHASE1:Hg19::chr5:92526866..92526914,-#_731a82d29cb8eb0e261f77134811de1ep@chr5:92526866..92526914, -
2.66e-30FFCP PHASE2:Hg19::chr8:40525350..40525354,-#_731a82d29cb8eb0e261f77134811de1ep@chr8:40525350..40525354, -
2.66e-30FFCP PHASE1:Hg19::chr6:45399422..45399430,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399422..45399430, +
2.66e-30FFCP PHASE1:Hg19::chr6:73786593..73786601,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786593..73786601, +
2.66e-30FFCP PHASE2:Hg19::chr6:45399724..45399733,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399724..45399733, +
2.66e-30FFCP PHASE2:Hg19::chr6:45399422..45399430,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399422..45399430, +
2.66e-30FFCP PHASE1:Hg19::chr6:73786620..73786627,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786620..73786627, +
2.66e-30FFCP PHASE1:Hg19::chr13:70823810..70823813,+#_731a82d29cb8eb0e261f77134811de1ep@chr13:70823810..70823813, +
2.66e-30FFCP PHASE2:Hg19::chr6:73786593..73786601,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786593..73786601, +
2.66e-30FFCP PHASE2:Hg19::chr13:70823810..70823813,+#_731a82d29cb8eb0e261f77134811de1ep@chr13:70823810..70823813, +
3.09e-30FFCP PHASE2:Hg19::chr18:10085554..10085562,+#_6ab758267c516e266b3cc84006025e3ap@chr18:10085554..10085562, +
3.09e-30FFCP PHASE1:Hg19::chr18:10085554..10085562,+#_6ab758267c516e266b3cc84006025e3ap@chr18:10085554..10085562, +
3.59e-30FFCP PHASE2:Hg19::chr1:156779602..156779619,-#_b0a10e90ac2aa3a790fb9716f2bbd976p@chr1:156779602..156779619, -
3.59e-30FFCP PHASE1:Hg19::chr1:156779602..156779619,-#_b0a10e90ac2aa3a790fb9716f2bbd976p@chr1:156779602..156779619, -
7.5e-29FFCP PHASE1:Hg19::chr21:37377429..37377443,+#_d0518c616b4f4645db245080ba4c6f03p2@ENST00000457157
7.5e-29FFCP PHASE2:Hg19::chr21:37377429..37377443,+#_d0518c616b4f4645db245080ba4c6f03p2@ENST00000457157
8.14e-26FFCP PHASE2:Hg19::chr4:89282612..89282616,+#_d620c4dda050ed3d00bebc254948b1cep@chr4:89282612..89282616, +
8.14e-26FFCP PHASE1:Hg19::chr4:89282612..89282616,+#_d620c4dda050ed3d00bebc254948b1cep@chr4:89282612..89282616, +
3.17e-25FFCP PHASE1:Hg19::chr14:36982707..36982717,-#_dc0ca4292e777cec68d90532f4c7e584p8@SFTA3
3.17e-25FFCP PHASE2:Hg19::chr14:36982707..36982717,-#_dc0ca4292e777cec68d90532f4c7e584p8@SFTA3
2.62e-23FFCP PHASE1:Hg19::chr8:97961449..97961460,-#_ff13f51a990286586a726a44f2e602cap@chr8:97961449..97961460, -
2.62e-23FFCP PHASE1:Hg19::chr17:79973593..79973633,-#_ff13f51a990286586a726a44f2e602cap@chr17:79973593..79973633, -
2.62e-23FFCP PHASE2:Hg19::chr4:169849979..169849990,-#_ff13f51a990286586a726a44f2e602cap@chr4:169849979..169849990, -
2.62e-23FFCP PHASE2:Hg19::chr17:13574618..13574636,-#_ff13f51a990286586a726a44f2e602cap@chr17:13574618..13574636, -
2.62e-23FFCP PHASE1:Hg19::chr8:98066259..98066270,-#_ff13f51a990286586a726a44f2e602cap@chr8:98066259..98066270, -
2.62e-23FFCP PHASE1:Hg19::chr3:63804973..63804980,+#_ff13f51a990286586a726a44f2e602cap3@C3orf49
2.62e-23FFCP PHASE1:Hg19::chr1:33886864..33886872,-#_ff13f51a990286586a726a44f2e602cap@chr1:33886864..33886872, -
2.62e-23FFCP PHASE2:Hg19::chrX:48056224..48056233,-#_ff13f51a990286586a726a44f2e602cap1@SSX5
2.62e-23FFCP PHASE2:Hg19::chr9:129291797..129291800,-#_ff13f51a990286586a726a44f2e602cap@chr9:129291797..129291800, -
2.62e-23FFCP PHASE2:Hg19::chr7:120378742..120378768,-#_ff13f51a990286586a726a44f2e602cap@chr7:120378742..120378768, -
2.62e-23FFCP PHASE1:Hg19::chr12:15722105..15722121,+#_ff13f51a990286586a726a44f2e602cap@chr12:15722105..15722121, +
2.62e-23FFCP PHASE2:Hg19::chr3:63805044..63805054,+#_ff13f51a990286586a726a44f2e602cap1@C3orf49
2.62e-23FFCP PHASE2:Hg19::chr2:97626013..97626024,+#_ff13f51a990286586a726a44f2e602cap@chr2:97626013..97626024, +
2.62e-23FFCP PHASE2:Hg19::chr15:89655929..89655934,+#_ff13f51a990286586a726a44f2e602cap@chr15:89655929..89655934, +
2.62e-23FFCP PHASE1:Hg19::chr7:68735214..68735224,+#_ff13f51a990286586a726a44f2e602cap@chr7:68735214..68735224, +
2.62e-23FFCP PHASE1:Hg19::chr2:220695661..220695670,+#_ff13f51a990286586a726a44f2e602cap@chr2:220695661..220695670, +
2.62e-23FFCP PHASE1:Hg19::chr18:39258990..39258996,-#_ff13f51a990286586a726a44f2e602cap@chr18:39258990..39258996, -
2.62e-23FFCP PHASE2:Hg19::chr8:57526601..57526612,+#_ff13f51a990286586a726a44f2e602cap@chr8:57526601..57526612, +
2.62e-23FFCP PHASE1:Hg19::chr13:76694533..76694542,+#_ff13f51a990286586a726a44f2e602cap@chr13:76694533..76694542, +
2.62e-23FFCP PHASE2:Hg19::chr2:103235035..103235044,+#_ff13f51a990286586a726a44f2e602cap@chr2:103235035..103235044, +
2.62e-23FFCP PHASE2:Hg19::chr18:39798771..39798780,-#_ff13f51a990286586a726a44f2e602cap@chr18:39798771..39798780, -
2.62e-23FFCP PHASE1:Hg19::chr8:54464033..54464036,-#_ff13f51a990286586a726a44f2e602cap@chr8:54464033..54464036, -
2.62e-23FFCP PHASE1:Hg19::chr6:169224860..169224875,+#_ff13f51a990286586a726a44f2e602cap@chr6:169224860..169224875, +
2.62e-23FFCP PHASE1:Hg19::chr20:2779199..2779205,-#_ff13f51a990286586a726a44f2e602cap13@CPXM1
2.62e-23FFCP PHASE1:Hg19::chr17:63511856..63511858,-#_ff13f51a990286586a726a44f2e602cap@chr17:63511856..63511858, -
2.62e-23FFCP PHASE1:Hg19::chr16:50553120..50553126,-#_ff13f51a990286586a726a44f2e602cap@chr16:50553120..50553126, -
2.62e-23FFCP PHASE2:Hg19::chr8:100549773..100549807,-#_ff13f51a990286586a726a44f2e602cap@chr8:100549773..100549807, -
2.62e-23FFCP PHASE2:Hg19::chr20:2779313..2779314,-#_ff13f51a990286586a726a44f2e602cap16@CPXM1
2.62e-23FFCP PHASE2:Hg19::chr16:50553120..50553126,-#_ff13f51a990286586a726a44f2e602cap@chr16:50553120..50553126, -
2.62e-23FFCP PHASE2:Hg19::chr14:58415850..58415853,-#_ff13f51a990286586a726a44f2e602cap@chr14:58415850..58415853, -
2.62e-23FFCP PHASE2:Hg19::chr10:115999570..115999575,+#_ff13f51a990286586a726a44f2e602cap9@VWA2
2.62e-23FFCP PHASE1:Hg19::chr7:95776285..95776292,-#_ff13f51a990286586a726a44f2e602cap@chr7:95776285..95776292, -
2.62e-23FFCP PHASE1:Hg19::chr2:241625621..241625629,+#_ff13f51a990286586a726a44f2e602cap2@ENST00000407635
2.62e-23FFCP PHASE2:Hg19::chr9:97856010..97856019,+#_ff13f51a990286586a726a44f2e602cap@chr9:97856010..97856019, +
2.62e-23FFCP PHASE2:Hg19::chr8:98015616..98015617,-#_ff13f51a990286586a726a44f2e602cap@chr8:98015616..98015617, -
2.62e-23FFCP PHASE2:Hg19::chr3:189838995..189839000,-#_ff13f51a990286586a726a44f2e602cap31@LEPREL1
2.62e-23FFCP PHASE2:Hg19::chr1:188856567..188856573,-#_ff13f51a990286586a726a44f2e602cap2@ENST00000414765
2.62e-23FFCP PHASE1:Hg19::chr12:84664662..84664670,+#_ff13f51a990286586a726a44f2e602cap3@ENST00000547882
2.62e-23FFCP PHASE2:Hg19::chr5:134915254..134915270,-#_ff13f51a990286586a726a44f2e602cap3@CXCL14
2.62e-23FFCP PHASE2:Hg19::chr2:175412075..175412078,+#_ff13f51a990286586a726a44f2e602cap3@uc002uix.1
2.62e-23FFCP PHASE1:Hg19::chr7:26657673..26657685,-#_ff13f51a990286586a726a44f2e602cap@chr7:26657673..26657685, -
2.62e-23FFCP PHASE2:Hg19::chr6:998897..998898,-#_ff13f51a990286586a726a44f2e602cap@chr6:998897..998898, -
2.62e-23FFCP PHASE2:Hg19::chr15:62007373..62007374,-#_ff13f51a990286586a726a44f2e602cap2@ENST00000559590
2.62e-23FFCP PHASE1:Hg19::chrX:135764624..135764645,-#_ff13f51a990286586a726a44f2e602cap@chrX:135764624..135764645, -
2.62e-23FFCP PHASE1:Hg19::chr2:97626185..97626188,-#_ff13f51a990286586a726a44f2e602cap@chr2:97626185..97626188, -
2.62e-23FFCP PHASE1:Hg19::chr14:58045730..58045732,-#_ff13f51a990286586a726a44f2e602cap@chr14:58045730..58045732, -
2.62e-23FFCP PHASE2:Hg19::chr4:3838289..3838308,-#_ff13f51a990286586a726a44f2e602cap@chr4:3838289..3838308, -
2.62e-23FFCP PHASE2:Hg19::chr18:28978481..28978484,-#_ff13f51a990286586a726a44f2e602cap@chr18:28978481..28978484, -
2.62e-23FFCP PHASE1:Hg19::chr9:125306070..125306106,+#_ff13f51a990286586a726a44f2e602cap@chr9:125306070..125306106, +
2.62e-23FFCP PHASE1:Hg19::chr8:38441630..38441635,+#_ff13f51a990286586a726a44f2e602cap@chr8:38441630..38441635, +
2.62e-23FFCP PHASE1:Hg19::chr6:166575975..166575983,-#_ff13f51a990286586a726a44f2e602cap@chr6:166575975..166575983, -
2.62e-23FFCP PHASE1:Hg19::chr4:6324309..6324314,-#_ff13f51a990286586a726a44f2e602cap43@PPP2R2C
2.62e-23FFCP PHASE1:Hg19::chr3:86703174..86703181,-#_ff13f51a990286586a726a44f2e602cap@chr3:86703174..86703181, -
2.62e-23FFCP PHASE1:Hg19::chr2:103235132..103235142,+#_ff13f51a990286586a726a44f2e602cap@chr2:103235132..103235142, +
2.62e-23FFCP PHASE2:Hg19::chr3:86929211..86929219,+#_ff13f51a990286586a726a44f2e602cap@chr3:86929211..86929219, +
2.62e-23FFCP PHASE2:Hg19::chr16:13010571..13010578,+#_ff13f51a990286586a726a44f2e602cap@chr16:13010571..13010578, +
2.62e-23FFCP PHASE1:Hg19::chr14:88452908..88452916,-#_ff13f51a990286586a726a44f2e602cap@chr14:88452908..88452916, -
2.62e-23FFCP PHASE2:Hg19::chr8:97961177..97961185,-#_ff13f51a990286586a726a44f2e602cap@chr8:97961177..97961185, -
2.62e-23FFCP PHASE2:Hg19::chr6:39526005..39526014,-#_ff13f51a990286586a726a44f2e602cap@chr6:39526005..39526014, -
2.62e-23FFCP PHASE2:Hg19::chr3:150914094..150914095,+#_ff13f51a990286586a726a44f2e602cap@chr3:150914094..150914095, +

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