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DOID:3905

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Name:lung carcinoma
Namespace:FANTOM
Definition:"A lung cancer that is located_in the lungs and has_symptom cough and has_symptom chest discomfort or pain and has_symptom weight loss and has_symptom hemoptysis." [url:https://merck.com/mmpe/sec05/ch062/ch062b.html]
Xrefs:
links:

NCI:C4878
OMIM:211980
SNOMEDCT_2010_1_31:154485001
SNOMEDCT_2010_1_31:187875007
SNOMEDCT_2010_1_31:269561006

UMLS_CUI:C0684249
Synonyms: "cancer of lung" EXACT [NCI2004_11_17:C4878]
"carcinoma OF LUNG" EXACT [MTH:460]
"carcinoma of lung" RELATED []
"lung carcinoma" EXACT [SNOMEDCT_2005_07_31:269561006]
"lung carcinoma" EXACT [SNOMEDCT_2005_07_31:154485001]
Comments:OMIM mapping confirmed by DO. [SN].

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:1324(lung cancer)



Children


is a:DOID:3908 (non-small cell lung carcinoma),DOID:5409 (lung small cell carcinoma)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3905 (lung carcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
9.75e-45FFCP PHASE1:Hg19::chr6:45405393..45405412,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405393..45405412, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399263..45399274,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399263..45399274, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399294..45399301,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399294..45399301, +
9.75e-45FFCP PHASE2:Hg19::chr6:125378873..125378876,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:125378873..125378876, +
9.75e-45FFCP PHASE2:Hg19::chr6:45405332..45405343,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405332..45405343, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399245..45399258,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399245..45399258, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399294..45399301,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399294..45399301, +
9.75e-45FFCP PHASE1:Hg19::chr6:125378873..125378876,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:125378873..125378876, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399533..45399540,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399533..45399540, +
9.75e-45FFCP PHASE2:Hg19::chr6:45405393..45405412,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405393..45405412, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399263..45399274,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399263..45399274, +
9.75e-45FFCP PHASE1:Hg19::chr6:45405332..45405343,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405332..45405343, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399245..45399258,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399245..45399258, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399533..45399540,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399533..45399540, +
4.35e-40FFCP PHASE2:Hg19::chr6:73785930..73785949,-#_63c78ab1a3b8986f5f523383f41275dcp@chr6:73785930..73785949, -
4.35e-40FFCP PHASE1:Hg19::chr6:73785930..73785949,-#_63c78ab1a3b8986f5f523383f41275dcp@chr6:73785930..73785949, -
2.66e-30FFCP PHASE1:Hg19::chr6:73786620..73786627,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786620..73786627, +
2.66e-30FFCP PHASE2:Hg19::chr13:70823810..70823813,+#_731a82d29cb8eb0e261f77134811de1ep@chr13:70823810..70823813, +
2.66e-30FFCP PHASE2:Hg19::chr8:40525350..40525354,-#_731a82d29cb8eb0e261f77134811de1ep@chr8:40525350..40525354, -
2.66e-30FFCP PHASE2:Hg19::chr6:45399724..45399733,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399724..45399733, +
2.66e-30FFCP PHASE1:Hg19::chr13:70823810..70823813,+#_731a82d29cb8eb0e261f77134811de1ep@chr13:70823810..70823813, +
2.66e-30FFCP PHASE2:Hg19::chr6:45399422..45399430,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399422..45399430, +
2.66e-30FFCP PHASE2:Hg19::chr6:73786593..73786601,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786593..73786601, +
2.66e-30FFCP PHASE1:Hg19::chr8:40525350..40525354,-#_731a82d29cb8eb0e261f77134811de1ep@chr8:40525350..40525354, -
2.66e-30FFCP PHASE2:Hg19::chr5:92526866..92526914,-#_731a82d29cb8eb0e261f77134811de1ep@chr5:92526866..92526914, -
2.66e-30FFCP PHASE1:Hg19::chr6:45399724..45399733,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399724..45399733, +
2.66e-30FFCP PHASE2:Hg19::chr6:73786620..73786627,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786620..73786627, +
2.66e-30FFCP PHASE1:Hg19::chr6:45399422..45399430,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399422..45399430, +
2.66e-30FFCP PHASE1:Hg19::chr6:73786593..73786601,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786593..73786601, +
2.66e-30FFCP PHASE1:Hg19::chr5:92526866..92526914,-#_731a82d29cb8eb0e261f77134811de1ep@chr5:92526866..92526914, -
3.09e-30FFCP PHASE2:Hg19::chr18:10085554..10085562,+#_6ab758267c516e266b3cc84006025e3ap@chr18:10085554..10085562, +
3.09e-30FFCP PHASE1:Hg19::chr18:10085554..10085562,+#_6ab758267c516e266b3cc84006025e3ap@chr18:10085554..10085562, +
3.59e-30FFCP PHASE1:Hg19::chr1:156779602..156779619,-#_b0a10e90ac2aa3a790fb9716f2bbd976p@chr1:156779602..156779619, -
3.59e-30FFCP PHASE2:Hg19::chr1:156779602..156779619,-#_b0a10e90ac2aa3a790fb9716f2bbd976p@chr1:156779602..156779619, -
7.5e-29FFCP PHASE2:Hg19::chr21:37377429..37377443,+#_d0518c616b4f4645db245080ba4c6f03p2@ENST00000457157
7.5e-29FFCP PHASE1:Hg19::chr21:37377429..37377443,+#_d0518c616b4f4645db245080ba4c6f03p2@ENST00000457157
8.14e-26FFCP PHASE1:Hg19::chr4:89282612..89282616,+#_d620c4dda050ed3d00bebc254948b1cep@chr4:89282612..89282616, +
8.14e-26FFCP PHASE2:Hg19::chr4:89282612..89282616,+#_d620c4dda050ed3d00bebc254948b1cep@chr4:89282612..89282616, +
3.17e-25FFCP PHASE2:Hg19::chr14:36982707..36982717,-#_dc0ca4292e777cec68d90532f4c7e584p8@SFTA3
3.17e-25FFCP PHASE1:Hg19::chr14:36982707..36982717,-#_dc0ca4292e777cec68d90532f4c7e584p8@SFTA3
2.62e-23FFCP PHASE1:Hg19::chr7:79765099..79765103,+#_ff13f51a990286586a726a44f2e602cap29@GNAI1
2.62e-23FFCP PHASE1:Hg19::chr12:133040060..133040064,+#_ff13f51a990286586a726a44f2e602cap@chr12:133040060..133040064, +
2.62e-23FFCP PHASE2:Hg19::chr8:38459926..38459928,+#_ff13f51a990286586a726a44f2e602cap@chr8:38459926..38459928, +
2.62e-23FFCP PHASE1:Hg19::chr11:20538015..20538023,-#_ff13f51a990286586a726a44f2e602cap@chr11:20538015..20538023, -
2.62e-23FFCP PHASE2:Hg19::chr2:202413051..202413061,-#_ff13f51a990286586a726a44f2e602cap@chr2:202413051..202413061, -
2.62e-23FFCP PHASE2:Hg19::chr18:10085799..10085809,+#_ff13f51a990286586a726a44f2e602cap@chr18:10085799..10085809, +
2.62e-23FFCP PHASE2:Hg19::chr17:39140424..39140431,-#_ff13f51a990286586a726a44f2e602cap4@KRT40
2.62e-23FFCP PHASE2:Hg19::chr12:15722105..15722121,+#_ff13f51a990286586a726a44f2e602cap@chr12:15722105..15722121, +
2.62e-23FFCP PHASE1:Hg19::chr5:33619084..33619089,-#_ff13f51a990286586a726a44f2e602cap@chr5:33619084..33619089, -
2.62e-23FFCP PHASE1:Hg19::chr2:97626580..97626585,-#_ff13f51a990286586a726a44f2e602cap@chr2:97626580..97626585, -
2.62e-23FFCP PHASE1:Hg19::chr2:220594730..220594748,+#_ff13f51a990286586a726a44f2e602cap2@ENST00000442416
2.62e-23FFCP PHASE1:Hg19::chr1:144618112..144618116,+#_ff13f51a990286586a726a44f2e602cap4@NBPF8
2.62e-23FFCP PHASE1:Hg19::chr18:37331745..37331763,-#_ff13f51a990286586a726a44f2e602cap@chr18:37331745..37331763, -
2.62e-23FFCP PHASE1:Hg19::chr14:58448696..58448733,-#_ff13f51a990286586a726a44f2e602cap9@SLC35F4
2.62e-23FFCP PHASE1:Hg19::chr13:76563913..76563916,+#_ff13f51a990286586a726a44f2e602cap@chr13:76563913..76563916, +
2.62e-23FFCP PHASE2:Hg19::chr3:86701885..86701893,-#_ff13f51a990286586a726a44f2e602cap@chr3:86701885..86701893, -
2.62e-23FFCP PHASE2:Hg19::chr3:102635409..102635414,-#_ff13f51a990286586a726a44f2e602cap@chr3:102635409..102635414, -
2.62e-23FFCP PHASE2:Hg19::chr6:31681859..31681865,-#_ff13f51a990286586a726a44f2e602cap3@LY6G6E
2.62e-23FFCP PHASE1:Hg19::chr8:97965705..97965721,-#_ff13f51a990286586a726a44f2e602cap@chr8:97965705..97965721, -
2.62e-23FFCP PHASE1:Hg19::chr2:241625540..241625541,+#_ff13f51a990286586a726a44f2e602cap14@ENST00000407635
2.62e-23FFCP PHASE1:Hg19::chr14:36966895..36966899,-#_ff13f51a990286586a726a44f2e602cap@chr14:36966895..36966899, -
2.62e-23FFCP PHASE1:Hg19::chr8:98080543..98080550,-#_ff13f51a990286586a726a44f2e602cap@chr8:98080543..98080550, -
2.62e-23FFCP PHASE1:Hg19::chr21:26144899..26144920,-#_ff13f51a990286586a726a44f2e602cap@chr21:26144899..26144920, -
2.62e-23FFCP PHASE2:Hg19::chr6:64762702..64762707,+#_ff13f51a990286586a726a44f2e602cap@chr6:64762702..64762707, +
2.62e-23FFCP PHASE2:Hg19::chr6:141715304..141715307,+#_ff13f51a990286586a726a44f2e602cap@chr6:141715304..141715307, +
2.62e-23FFCP PHASE2:Hg19::chr4:178653531..178653568,+#_ff13f51a990286586a726a44f2e602cap@chr4:178653531..178653568, +
2.62e-23FFCP PHASE2:Hg19::chr2:192805223..192805230,+#_ff13f51a990286586a726a44f2e602cap@chr2:192805223..192805230, +
2.62e-23FFCP PHASE2:Hg19::chr21:43917055..43917058,-#_ff13f51a990286586a726a44f2e602cap@chr21:43917055..43917058, -
2.62e-23FFCP PHASE2:Hg19::chr17:9716257..9716264,-#_ff13f51a990286586a726a44f2e602cap@chr17:9716257..9716264, -
2.62e-23FFCP PHASE1:Hg19::chr9:129291797..129291800,-#_ff13f51a990286586a726a44f2e602cap@chr9:129291797..129291800, -
2.62e-23FFCP PHASE1:Hg19::chr8:39970826..39970832,+#_ff13f51a990286586a726a44f2e602cap@chr8:39970826..39970832, +
2.62e-23FFCP PHASE1:Hg19::chr2:97626013..97626024,+#_ff13f51a990286586a726a44f2e602cap@chr2:97626013..97626024, +
2.62e-23FFCP PHASE2:Hg19::chr3:77129779..77129782,+#_ff13f51a990286586a726a44f2e602cap@chr3:77129779..77129782, +
2.62e-23FFCP PHASE2:Hg19::chr2:97626499..97626505,-#_ff13f51a990286586a726a44f2e602cap@chr2:97626499..97626505, -
2.62e-23FFCP PHASE2:Hg19::chr14:58045730..58045732,-#_ff13f51a990286586a726a44f2e602cap@chr14:58045730..58045732, -
2.62e-23FFCP PHASE1:Hg19::chr3:86703134..86703137,-#_ff13f51a990286586a726a44f2e602cap@chr3:86703134..86703137, -
2.62e-23FFCP PHASE1:Hg19::chr2:103235035..103235044,+#_ff13f51a990286586a726a44f2e602cap@chr2:103235035..103235044, +
2.62e-23FFCP PHASE1:Hg19::chr16:13010590..13010593,+#_ff13f51a990286586a726a44f2e602cap@chr16:13010590..13010593, +
2.62e-23FFCP PHASE1:Hg19::chr11:67402354..67402359,-#_ff13f51a990286586a726a44f2e602cap@chr11:67402354..67402359, -
2.62e-23FFCP PHASE2:Hg19::chr5:79097476..79097484,+#_ff13f51a990286586a726a44f2e602cap@chr5:79097476..79097484, +
2.62e-23FFCP PHASE2:Hg19::chr13:92569013..92569022,-#_ff13f51a990286586a726a44f2e602cap@chr13:92569013..92569022, -
2.62e-23FFCP PHASE1:Hg19::chr2:23850233..23850248,+#_ff13f51a990286586a726a44f2e602cap@chr2:23850233..23850248, +
2.62e-23FFCP PHASE1:Hg19::chr10:29213480..29213487,-#_ff13f51a990286586a726a44f2e602cap@chr10:29213480..29213487, -
2.62e-23FFCP PHASE2:Hg19::chr17:70939741..70939790,-#_ff13f51a990286586a726a44f2e602cap@chr17:70939741..70939790, -
2.62e-23FFCP PHASE2:Hg19::chr8:98073725..98073731,-#_ff13f51a990286586a726a44f2e602cap@chr8:98073725..98073731, -
2.62e-23FFCP PHASE1:Hg19::chr11:98528704..98528712,+#_ff13f51a990286586a726a44f2e602cap@chr11:98528704..98528712, +
2.62e-23FFCP PHASE2:Hg19::chr2:33589897..33589917,+#_ff13f51a990286586a726a44f2e602cap@chr2:33589897..33589917, +
2.62e-23FFCP PHASE2:Hg19::chr19:46763803..46763808,-#_ff13f51a990286586a726a44f2e602cap@chr19:46763803..46763808, -
2.62e-23FFCP PHASE1:Hg19::chr4:169849979..169849990,-#_ff13f51a990286586a726a44f2e602cap@chr4:169849979..169849990, -
2.62e-23FFCP PHASE1:Hg19::chr1:234565260..234565271,-#_ff13f51a990286586a726a44f2e602cap@chr1:234565260..234565271, -
2.62e-23FFCP PHASE2:Hg19::chr9:129234745..129234747,-#_ff13f51a990286586a726a44f2e602cap@chr9:129234745..129234747, -
2.62e-23FFCP PHASE2:Hg19::chr7:111234799..111234807,-#_ff13f51a990286586a726a44f2e602cap@chr7:111234799..111234807, -
2.62e-23FFCP PHASE2:Hg19::chr3:63804973..63804980,+#_ff13f51a990286586a726a44f2e602cap3@C3orf49
2.62e-23FFCP PHASE2:Hg19::chr1:33886864..33886872,-#_ff13f51a990286586a726a44f2e602cap@chr1:33886864..33886872, -
2.62e-23FFCP PHASE2:Hg19::chr15:85564362..85564385,+#_ff13f51a990286586a726a44f2e602cap@chr15:85564362..85564385, +
2.62e-23FFCP PHASE1:Hg19::chr4:3838289..3838308,-#_ff13f51a990286586a726a44f2e602cap@chr4:3838289..3838308, -
2.62e-23FFCP PHASE1:Hg19::chr3:78360347..78360353,+#_ff13f51a990286586a726a44f2e602cap@chr3:78360347..78360353, +
2.62e-23FFCP PHASE2:Hg19::chr8:57525544..57525580,+#_ff13f51a990286586a726a44f2e602cap@chr8:57525544..57525580, +
2.62e-23FFCP PHASE2:Hg19::chr2:220695661..220695670,+#_ff13f51a990286586a726a44f2e602cap@chr2:220695661..220695670, +
2.62e-23FFCP PHASE2:Hg19::chr18:37420947..37420953,+#_ff13f51a990286586a726a44f2e602cap@chr18:37420947..37420953, +

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