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DOID:5409

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Name:lung small cell carcinoma
Namespace:FANTOM
Xrefs:
links:

MSH:D055752
NCI:C4917
OMIM:182280
SNOMEDCT_2010_1_31:254632001
SNOMEDCT_2010_1_31:254633006

UMLS_CUI:C0149925
Synonyms: "Oat cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254633006]
"SCLC" EXACT [CSP2005:2017-6589]
"small cell carcinoma of lung" RELATED []
"small cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254632001]
"small cell neuroendocrine carcinoma of lung" EXACT [NCI2004_11_17:C4917]
Comments:OMIM mapping confirmed by DO. [SN].

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:DOID:3905(lung carcinoma)



Children
NA

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:5409 (lung small cell carcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
1.55e-98FFCP PHASE1:Hg19::chr6:125378873..125378876,+#_5a0cadd9f97072f65b901942816bde31p@chr6:125378873..125378876, +
1.55e-98FFCP PHASE2:Hg19::chr6:125378873..125378876,+#_5a0cadd9f97072f65b901942816bde31p@chr6:125378873..125378876, +
2.4e-66FFCP PHASE1:Hg19::chr8:40525350..40525354,-#_40c90676995a138ba0819dfe8db6fb93p@chr8:40525350..40525354, -
2.4e-66FFCP PHASE2:Hg19::chr8:40525350..40525354,-#_40c90676995a138ba0819dfe8db6fb93p@chr8:40525350..40525354, -
3.1e-50FFCP PHASE2:Hg19::chr2:135169581..135169587,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:135169581..135169587, +
3.1e-50FFCP PHASE1:Hg19::chr8:98103977..98103981,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:98103977..98103981, -
3.1e-50FFCP PHASE2:Hg19::chr3:186548894..186548902,+#_5be4114e7d0131f457d60e83d77a108dp@chr3:186548894..186548902, +
3.1e-50FFCP PHASE2:Hg19::chr12:79756320..79756329,-#_5be4114e7d0131f457d60e83d77a108dp@chr12:79756320..79756329, -
3.1e-50FFCP PHASE2:Hg19::chr2:97625602..97625628,-#_5be4114e7d0131f457d60e83d77a108dp@chr2:97625602..97625628, -
3.1e-50FFCP PHASE2:Hg19::chr8:97965705..97965721,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:97965705..97965721, -
3.1e-50FFCP PHASE1:Hg19::chr12:84126726..84126727,-#_5be4114e7d0131f457d60e83d77a108dp@chr12:84126726..84126727, -
3.1e-50FFCP PHASE1:Hg19::chr6:169224860..169224875,+#_5be4114e7d0131f457d60e83d77a108dp@chr6:169224860..169224875, +
3.1e-50FFCP PHASE1:Hg19::chr15:62007373..62007374,-#_5be4114e7d0131f457d60e83d77a108dp2@ENST00000559590
3.1e-50FFCP PHASE1:Hg19::chr10:29213612..29213644,+#_5be4114e7d0131f457d60e83d77a108dp@chr10:29213612..29213644, +
3.1e-50FFCP PHASE1:Hg19::chr14:58045800..58045814,-#_5be4114e7d0131f457d60e83d77a108dp@chr14:58045800..58045814, -
3.1e-50FFCP PHASE2:Hg19::chr12:27925654..27925663,-#_5be4114e7d0131f457d60e83d77a108dp@chr12:27925654..27925663, -
3.1e-50FFCP PHASE1:Hg19::chr12:41194014..41194019,+#_5be4114e7d0131f457d60e83d77a108dp@chr12:41194014..41194019, +
3.1e-50FFCP PHASE2:Hg19::chrX:135761770..135761786,-#_5be4114e7d0131f457d60e83d77a108dp@chrX:135761770..135761786, -
3.1e-50FFCP PHASE2:Hg19::chr7:95775942..95775990,-#_5be4114e7d0131f457d60e83d77a108dp@chr7:95775942..95775990, -
3.1e-50FFCP PHASE1:Hg19::chr13:92569013..92569022,-#_5be4114e7d0131f457d60e83d77a108dp@chr13:92569013..92569022, -
3.1e-50FFCP PHASE1:Hg19::chr8:72938203..72938230,+#_5be4114e7d0131f457d60e83d77a108dp@chr8:72938203..72938230, +
3.1e-50FFCP PHASE2:Hg19::chr7:26482694..26482710,-#_5be4114e7d0131f457d60e83d77a108dp@chr7:26482694..26482710, -
3.1e-50FFCP PHASE1:Hg19::chr3:150914094..150914095,+#_5be4114e7d0131f457d60e83d77a108dp@chr3:150914094..150914095, +
3.1e-50FFCP PHASE1:Hg19::chr7:111234799..111234807,-#_5be4114e7d0131f457d60e83d77a108dp@chr7:111234799..111234807, -
3.1e-50FFCP PHASE2:Hg19::chr10:65821760..65821780,+#_5be4114e7d0131f457d60e83d77a108dp@chr10:65821760..65821780, +
3.1e-50FFCP PHASE1:Hg19::chr2:68113370..68113379,-#_5be4114e7d0131f457d60e83d77a108dp@chr2:68113370..68113379, -
3.1e-50FFCP PHASE1:Hg19::chr10:82723188..82723191,-#_5be4114e7d0131f457d60e83d77a108dp@chr10:82723188..82723191, -
3.1e-50FFCP PHASE2:Hg19::chr6:998897..998898,-#_5be4114e7d0131f457d60e83d77a108dp@chr6:998897..998898, -
3.1e-50FFCP PHASE1:Hg19::chr17:39140424..39140431,-#_5be4114e7d0131f457d60e83d77a108dp4@KRT40
3.1e-50FFCP PHASE2:Hg19::chr14:58448696..58448733,-#_5be4114e7d0131f457d60e83d77a108dp9@SLC35F4
3.1e-50FFCP PHASE2:Hg19::chr3:86703134..86703137,-#_5be4114e7d0131f457d60e83d77a108dp@chr3:86703134..86703137, -
3.1e-50FFCP PHASE2:Hg19::chr2:220607845..220607848,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:220607845..220607848, +
3.1e-50FFCP PHASE2:Hg19::chr10:129704562..129704569,+#_5be4114e7d0131f457d60e83d77a108dp@chr10:129704562..129704569, +
3.1e-50FFCP PHASE2:Hg19::chr21:26144899..26144920,-#_5be4114e7d0131f457d60e83d77a108dp@chr21:26144899..26144920, -
3.1e-50FFCP PHASE1:Hg19::chr6:154710410..154710428,-#_5be4114e7d0131f457d60e83d77a108dp@chr6:154710410..154710428, -
3.1e-50FFCP PHASE2:Hg19::chr4:3838289..3838308,-#_5be4114e7d0131f457d60e83d77a108dp@chr4:3838289..3838308, -
3.1e-50FFCP PHASE1:Hg19::chr7:26590563..26590574,-#_5be4114e7d0131f457d60e83d77a108dp@chr7:26590563..26590574, -
3.1e-50FFCP PHASE1:Hg19::chr17:70939741..70939790,-#_5be4114e7d0131f457d60e83d77a108dp@chr17:70939741..70939790, -
3.1e-50FFCP PHASE2:Hg19::chrX:10852011..10852021,-#_5be4114e7d0131f457d60e83d77a108dp27@MID1
3.1e-50FFCP PHASE1:Hg19::chr2:192805413..192805418,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:192805413..192805418, +
3.1e-50FFCP PHASE1:Hg19::chr13:104517168..104517170,+#_5be4114e7d0131f457d60e83d77a108dp@chr13:104517168..104517170, +
3.1e-50FFCP PHASE2:Hg19::chr15:62007373..62007374,-#_5be4114e7d0131f457d60e83d77a108dp2@ENST00000559590
3.1e-50FFCP PHASE2:Hg19::chr4:160189282..160189289,+#_5be4114e7d0131f457d60e83d77a108dp38@RAPGEF2
3.1e-50FFCP PHASE2:Hg19::chr8:116215298..116215305,+#_5be4114e7d0131f457d60e83d77a108dp@chr8:116215298..116215305, +
3.1e-50FFCP PHASE2:Hg19::chr14:58045800..58045814,-#_5be4114e7d0131f457d60e83d77a108dp@chr14:58045800..58045814, -
3.1e-50FFCP PHASE2:Hg19::chr3:78360522..78360543,+#_5be4114e7d0131f457d60e83d77a108dp@chr3:78360522..78360543, +
3.1e-50FFCP PHASE2:Hg19::chr9:17457123..17457129,+#_5be4114e7d0131f457d60e83d77a108dp@chr9:17457123..17457129, +
3.1e-50FFCP PHASE1:Hg19::chr8:98015654..98015697,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:98015654..98015697, -
3.1e-50FFCP PHASE2:Hg19::chr13:92569013..92569022,-#_5be4114e7d0131f457d60e83d77a108dp@chr13:92569013..92569022, -
3.1e-50FFCP PHASE1:Hg19::chr18:10085817..10085825,+#_5be4114e7d0131f457d60e83d77a108dp@chr18:10085817..10085825, +
3.1e-50FFCP PHASE1:Hg19::chr12:76206813..76206837,-#_5be4114e7d0131f457d60e83d77a108dp@chr12:76206813..76206837, -
3.1e-50FFCP PHASE1:Hg19::chr6:140771120..140771128,+#_5be4114e7d0131f457d60e83d77a108dp@chr6:140771120..140771128, +
3.1e-50FFCP PHASE1:Hg19::chr17:58979826..58979836,+#_5be4114e7d0131f457d60e83d77a108dp@chr17:58979826..58979836, +
3.1e-50FFCP PHASE2:Hg19::chr11:42142040..42142055,+#_5be4114e7d0131f457d60e83d77a108dp@chr11:42142040..42142055, +
3.1e-50FFCP PHASE2:Hg19::chr17:39140411..39140419,-#_5be4114e7d0131f457d60e83d77a108dp5@KRT40
3.1e-50FFCP PHASE1:Hg19::chr9:125306070..125306106,+#_5be4114e7d0131f457d60e83d77a108dp@chr9:125306070..125306106, +
3.1e-50FFCP PHASE2:Hg19::chr8:98103977..98103981,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:98103977..98103981, -
3.1e-50FFCP PHASE1:Hg19::chr15:85564362..85564385,+#_5be4114e7d0131f457d60e83d77a108dp@chr15:85564362..85564385, +
3.1e-50FFCP PHASE1:Hg19::chr14:59132994..59133018,+#_5be4114e7d0131f457d60e83d77a108dp@chr14:59132994..59133018, +
3.1e-50FFCP PHASE2:Hg19::chr12:46124855..46124858,+#_5be4114e7d0131f457d60e83d77a108dp@chr12:46124855..46124858, +
3.1e-50FFCP PHASE1:Hg19::chr3:86289712..86289720,+#_5be4114e7d0131f457d60e83d77a108dp@chr3:86289712..86289720, +
3.1e-50FFCP PHASE2:Hg19::chr6:169224860..169224875,+#_5be4114e7d0131f457d60e83d77a108dp@chr6:169224860..169224875, +
3.1e-50FFCP PHASE1:Hg19::chr2:220594700..220594702,+#_5be4114e7d0131f457d60e83d77a108dp6@ENST00000442416
3.1e-50FFCP PHASE1:Hg19::chr2:135119636..135119642,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:135119636..135119642, +
3.1e-50FFCP PHASE1:Hg19::chr2:8803669..8803680,-#_5be4114e7d0131f457d60e83d77a108dp@chr2:8803669..8803680, -
3.1e-50FFCP PHASE1:Hg19::chr8:97961449..97961460,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:97961449..97961460, -
3.1e-50FFCP PHASE1:Hg19::chr16:13010590..13010593,+#_5be4114e7d0131f457d60e83d77a108dp@chr16:13010590..13010593, +
3.1e-50FFCP PHASE2:Hg19::chr8:72938203..72938230,+#_5be4114e7d0131f457d60e83d77a108dp@chr8:72938203..72938230, +
3.1e-50FFCP PHASE2:Hg19::chr3:150914094..150914095,+#_5be4114e7d0131f457d60e83d77a108dp@chr3:150914094..150914095, +
3.1e-50FFCP PHASE2:Hg19::chr7:111234799..111234807,-#_5be4114e7d0131f457d60e83d77a108dp@chr7:111234799..111234807, -
3.1e-50FFCP PHASE2:Hg19::chr2:68113370..68113379,-#_5be4114e7d0131f457d60e83d77a108dp@chr2:68113370..68113379, -
3.1e-50FFCP PHASE2:Hg19::chr10:129703363..129703373,+#_5be4114e7d0131f457d60e83d77a108dp@chr10:129703363..129703373, +
3.1e-50FFCP PHASE2:Hg19::chr11:31093041..31093047,-#_5be4114e7d0131f457d60e83d77a108dp@chr11:31093041..31093047, -
3.1e-50FFCP PHASE2:Hg19::chr8:97961449..97961460,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:97961449..97961460, -
3.1e-50FFCP PHASE1:Hg19::chr19:46531064..46531073,+#_5be4114e7d0131f457d60e83d77a108dp@chr19:46531064..46531073, +
3.1e-50FFCP PHASE2:Hg19::chr12:84126726..84126727,-#_5be4114e7d0131f457d60e83d77a108dp@chr12:84126726..84126727, -
3.1e-50FFCP PHASE1:Hg19::chr18:37420947..37420953,+#_5be4114e7d0131f457d60e83d77a108dp@chr18:37420947..37420953, +
3.1e-50FFCP PHASE2:Hg19::chr8:98015654..98015697,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:98015654..98015697, -
3.1e-50FFCP PHASE2:Hg19::chr16:13010590..13010593,+#_5be4114e7d0131f457d60e83d77a108dp@chr16:13010590..13010593, +
3.1e-50FFCP PHASE1:Hg19::chr12:84664687..84664694,+#_5be4114e7d0131f457d60e83d77a108dp4@ENST00000547882
3.1e-50FFCP PHASE1:Hg19::chr4:157516018..157516023,+#_5be4114e7d0131f457d60e83d77a108dp@chr4:157516018..157516023, +
3.1e-50FFCP PHASE1:Hg19::chr7:44574327..44574332,-#_5be4114e7d0131f457d60e83d77a108dp@chr7:44574327..44574332, -
3.1e-50FFCP PHASE2:Hg19::chr6:154710410..154710428,-#_5be4114e7d0131f457d60e83d77a108dp@chr6:154710410..154710428, -
3.1e-50FFCP PHASE1:Hg19::chr11:69640133..69640140,+#_5be4114e7d0131f457d60e83d77a108dp@chr11:69640133..69640140, +
3.1e-50FFCP PHASE1:Hg19::chr2:130568628..130568649,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:130568628..130568649, +
3.1e-50FFCP PHASE1:Hg19::chr8:73794113..73794122,+#_5be4114e7d0131f457d60e83d77a108dp@chr8:73794113..73794122, +
3.1e-50FFCP PHASE2:Hg19::chr7:26590563..26590574,-#_5be4114e7d0131f457d60e83d77a108dp@chr7:26590563..26590574, -
3.1e-50FFCP PHASE2:Hg19::chr2:192805413..192805418,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:192805413..192805418, +
3.1e-50FFCP PHASE1:Hg19::chr7:120381610..120381618,+#_5be4114e7d0131f457d60e83d77a108dp@chr7:120381610..120381618, +
3.1e-50FFCP PHASE2:Hg19::chr16:66088105..66088108,-#_5be4114e7d0131f457d60e83d77a108dp@chr16:66088105..66088108, -
3.1e-50FFCP PHASE1:Hg19::chr6:31681859..31681865,-#_5be4114e7d0131f457d60e83d77a108dp3@LY6G6E
3.1e-50FFCP PHASE2:Hg19::chr15:85564362..85564385,+#_5be4114e7d0131f457d60e83d77a108dp@chr15:85564362..85564385, +
3.1e-50FFCP PHASE1:Hg19::chr2:234862436..234862439,+#_5be4114e7d0131f457d60e83d77a108dp16@TRPM8
3.1e-50FFCP PHASE1:Hg19::chr9:97856010..97856019,+#_5be4114e7d0131f457d60e83d77a108dp@chr9:97856010..97856019, +
3.1e-50FFCP PHASE1:Hg19::chr10:129703377..129703388,+#_5be4114e7d0131f457d60e83d77a108dp@chr10:129703377..129703388, +
3.1e-50FFCP PHASE2:Hg19::chr14:59132994..59133018,+#_5be4114e7d0131f457d60e83d77a108dp@chr14:59132994..59133018, +
3.1e-50FFCP PHASE2:Hg19::chr2:135119636..135119642,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:135119636..135119642, +
3.1e-50FFCP PHASE1:Hg19::chr8:98070371..98070384,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:98070371..98070384, -
3.1e-50FFCP PHASE2:Hg19::chr18:73967160..73967162,-#_5be4114e7d0131f457d60e83d77a108dp@chr18:73967160..73967162, -
3.1e-50FFCP PHASE2:Hg19::chr2:8803669..8803680,-#_5be4114e7d0131f457d60e83d77a108dp@chr2:8803669..8803680, -