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DOID:5409

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Name:lung small cell carcinoma
Namespace:FANTOM
Xrefs:
links:

MSH:D055752
NCI:C4917
OMIM:182280
SNOMEDCT_2010_1_31:254632001
SNOMEDCT_2010_1_31:254633006

UMLS_CUI:C0149925
Synonyms: "Oat cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254633006]
"SCLC" EXACT [CSP2005:2017-6589]
"small cell carcinoma of lung" RELATED []
"small cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254632001]
"small cell neuroendocrine carcinoma of lung" EXACT [NCI2004_11_17:C4917]
Comments:OMIM mapping confirmed by DO. [SN].

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:3905(lung carcinoma)



Children
NA

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:5409 (lung small cell carcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.55e-98FFCP PHASE2:Hg19::chr6:125378873..125378876,+#_5a0cadd9f97072f65b901942816bde31p@chr6:125378873..125378876, +
1.55e-98FFCP PHASE1:Hg19::chr6:125378873..125378876,+#_5a0cadd9f97072f65b901942816bde31p@chr6:125378873..125378876, +
2.4e-66FFCP PHASE1:Hg19::chr8:40525350..40525354,-#_40c90676995a138ba0819dfe8db6fb93p@chr8:40525350..40525354, -
2.4e-66FFCP PHASE2:Hg19::chr8:40525350..40525354,-#_40c90676995a138ba0819dfe8db6fb93p@chr8:40525350..40525354, -
3.1e-50FFCP PHASE1:Hg19::chr3:78360347..78360353,+#_5be4114e7d0131f457d60e83d77a108dp@chr3:78360347..78360353, +
3.1e-50FFCP PHASE2:Hg19::chr6:998897..998898,-#_5be4114e7d0131f457d60e83d77a108dp@chr6:998897..998898, -
3.1e-50FFCP PHASE1:Hg19::chr10:66459172..66459188,-#_5be4114e7d0131f457d60e83d77a108dp@chr10:66459172..66459188, -
3.1e-50FFCP PHASE1:Hg19::chr14:60194043..60194066,-#_5be4114e7d0131f457d60e83d77a108dp18@RTN1
3.1e-50FFCP PHASE2:Hg19::chr2:103235329..103235342,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:103235329..103235342, +
3.1e-50FFCP PHASE1:Hg19::chr8:97962018..97962029,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:97962018..97962029, -
3.1e-50FFCP PHASE1:Hg19::chr12:46124855..46124858,+#_5be4114e7d0131f457d60e83d77a108dp@chr12:46124855..46124858, +
3.1e-50FFCP PHASE1:Hg19::chr7:7749088..7749127,+#_5be4114e7d0131f457d60e83d77a108dp@chr7:7749088..7749127, +
3.1e-50FFCP PHASE2:Hg19::chr10:129704395..129704457,+#_5be4114e7d0131f457d60e83d77a108dp@chr10:129704395..129704457, +
3.1e-50FFCP PHASE1:Hg19::chr4:41750020..41750029,-#_5be4114e7d0131f457d60e83d77a108dp9@PHOX2B
3.1e-50FFCP PHASE1:Hg19::chr2:234862417..234862434,+#_5be4114e7d0131f457d60e83d77a108dp6@TRPM8
3.1e-50FFCP PHASE1:Hg19::chr11:20362300..20362305,+#_5be4114e7d0131f457d60e83d77a108dp@chr11:20362300..20362305, +
3.1e-50FFCP PHASE2:Hg19::chr4:39301903..39301910,-#_5be4114e7d0131f457d60e83d77a108dp@chr4:39301903..39301910, -
3.1e-50FFCP PHASE2:Hg19::chr12:133040060..133040064,+#_5be4114e7d0131f457d60e83d77a108dp@chr12:133040060..133040064, +
3.1e-50FFCP PHASE1:Hg19::chr6:141460346..141460355,+#_5be4114e7d0131f457d60e83d77a108dp@chr6:141460346..141460355, +
3.1e-50FFCP PHASE2:Hg19::chr9:125306070..125306106,+#_5be4114e7d0131f457d60e83d77a108dp@chr9:125306070..125306106, +
3.1e-50FFCP PHASE2:Hg19::chr6:140771120..140771128,+#_5be4114e7d0131f457d60e83d77a108dp@chr6:140771120..140771128, +
3.1e-50FFCP PHASE1:Hg19::chr18:28978481..28978484,-#_5be4114e7d0131f457d60e83d77a108dp@chr18:28978481..28978484, -
3.1e-50FFCP PHASE1:Hg19::chr14:57021818..57021822,+#_5be4114e7d0131f457d60e83d77a108dp@chr14:57021818..57021822, +
3.1e-50FFCP PHASE1:Hg19::chr5:33619084..33619089,-#_5be4114e7d0131f457d60e83d77a108dp@chr5:33619084..33619089, -
3.1e-50FFCP PHASE2:Hg19::chr8:116215335..116215378,+#_5be4114e7d0131f457d60e83d77a108dp@chr8:116215335..116215378, +
3.1e-50FFCP PHASE2:Hg19::chr7:26482694..26482710,-#_5be4114e7d0131f457d60e83d77a108dp@chr7:26482694..26482710, -
3.1e-50FFCP PHASE1:Hg19::chr1:181360920..181360925,+#_5be4114e7d0131f457d60e83d77a108dp@chr1:181360920..181360925, +
3.1e-50FFCP PHASE1:Hg19::chr12:84664700..84664710,+#_5be4114e7d0131f457d60e83d77a108dp1@ENST00000547882
3.1e-50FFCP PHASE2:Hg19::chr20:45418126..45418131,-#_5be4114e7d0131f457d60e83d77a108dp@chr20:45418126..45418131, -
3.1e-50FFCP PHASE2:Hg19::chr13:76694533..76694542,+#_5be4114e7d0131f457d60e83d77a108dp@chr13:76694533..76694542, +
3.1e-50FFCP PHASE2:Hg19::chr9:97856010..97856019,+#_5be4114e7d0131f457d60e83d77a108dp@chr9:97856010..97856019, +
3.1e-50FFCP PHASE1:Hg19::chr2:222160756..222160761,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:222160756..222160761, +
3.1e-50FFCP PHASE2:Hg19::chr6:31681859..31681865,-#_5be4114e7d0131f457d60e83d77a108dp3@LY6G6E
3.1e-50FFCP PHASE1:Hg19::chr18:74671119..74671124,+#_5be4114e7d0131f457d60e83d77a108dp@chr18:74671119..74671124, +
3.1e-50FFCP PHASE2:Hg19::chr2:222127471..222127478,-#_5be4114e7d0131f457d60e83d77a108dp@chr2:222127471..222127478, -
3.1e-50FFCP PHASE2:Hg19::chr3:1991867..1991875,-#_5be4114e7d0131f457d60e83d77a108dp@chr3:1991867..1991875, -
3.1e-50FFCP PHASE2:Hg19::chr2:97626442..97626445,-#_5be4114e7d0131f457d60e83d77a108dp@chr2:97626442..97626445, -
3.1e-50FFCP PHASE2:Hg19::chr21:38295313..38295326,-#_5be4114e7d0131f457d60e83d77a108dp@chr21:38295313..38295326, -
3.1e-50FFCP PHASE2:Hg19::chr4:81460545..81460547,-#_5be4114e7d0131f457d60e83d77a108dp@chr4:81460545..81460547, -
3.1e-50FFCP PHASE2:Hg19::chr2:241625475..241625482,+#_5be4114e7d0131f457d60e83d77a108dp8@ENST00000407635
3.1e-50FFCP PHASE2:Hg19::chr1:168756303..168756308,+#_5be4114e7d0131f457d60e83d77a108dp1@MGC4473
3.1e-50FFCP PHASE1:Hg19::chr9:17454052..17454060,+#_5be4114e7d0131f457d60e83d77a108dp@chr9:17454052..17454060, +
3.1e-50FFCP PHASE1:Hg19::chr14:58415850..58415853,-#_5be4114e7d0131f457d60e83d77a108dp@chr14:58415850..58415853, -
3.1e-50FFCP PHASE2:Hg19::chr15:62007373..62007374,-#_5be4114e7d0131f457d60e83d77a108dp2@ENST00000559590
3.1e-50FFCP PHASE2:Hg19::chr5:79097476..79097484,+#_5be4114e7d0131f457d60e83d77a108dp@chr5:79097476..79097484, +
3.1e-50FFCP PHASE1:Hg19::chr16:7428243..7428259,+#_5be4114e7d0131f457d60e83d77a108dp@chr16:7428243..7428259, +
3.1e-50FFCP PHASE2:Hg19::chr1:199134722..199134729,+#_5be4114e7d0131f457d60e83d77a108dp@chr1:199134722..199134729, +
3.1e-50FFCP PHASE1:Hg19::chr7:120378721..120378730,-#_5be4114e7d0131f457d60e83d77a108dp@chr7:120378721..120378730, -
3.1e-50FFCP PHASE1:Hg19::chr3:86929211..86929219,+#_5be4114e7d0131f457d60e83d77a108dp@chr3:86929211..86929219, +
3.1e-50FFCP PHASE1:Hg19::chr2:220607845..220607848,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:220607845..220607848, +
3.1e-50FFCP PHASE2:Hg19::chr8:97961686..97961696,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:97961686..97961696, -
3.1e-50FFCP PHASE2:Hg19::chr7:111234799..111234807,-#_5be4114e7d0131f457d60e83d77a108dp@chr7:111234799..111234807, -
3.1e-50FFCP PHASE1:Hg19::chr2:135119636..135119642,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:135119636..135119642, +
3.1e-50FFCP PHASE2:Hg19::chr4:185426203..185426209,-#_5be4114e7d0131f457d60e83d77a108dp@chr4:185426203..185426209, -
3.1e-50FFCP PHASE1:Hg19::chr15:96959907..96959930,+#_5be4114e7d0131f457d60e83d77a108dp@chr15:96959907..96959930, +
3.1e-50FFCP PHASE2:Hg19::chr3:86703174..86703181,-#_5be4114e7d0131f457d60e83d77a108dp@chr3:86703174..86703181, -
3.1e-50FFCP PHASE2:Hg19::chr2:220594730..220594748,+#_5be4114e7d0131f457d60e83d77a108dp2@ENST00000442416
3.1e-50FFCP PHASE2:Hg19::chr1:100110851..100110860,+#_5be4114e7d0131f457d60e83d77a108dp@chr1:100110851..100110860, +
3.1e-50FFCP PHASE2:Hg19::chr11:20362300..20362305,+#_5be4114e7d0131f457d60e83d77a108dp@chr11:20362300..20362305, +
3.1e-50FFCP PHASE1:Hg19::chr8:98075951..98075959,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:98075951..98075959, -
3.1e-50FFCP PHASE1:Hg19::chr8:139510692..139510697,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:139510692..139510697, -
3.1e-50FFCP PHASE2:Hg19::chr8:98070371..98070384,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:98070371..98070384, -
3.1e-50FFCP PHASE1:Hg19::chr2:97625602..97625628,-#_5be4114e7d0131f457d60e83d77a108dp@chr2:97625602..97625628, -
3.1e-50FFCP PHASE1:Hg19::chr10:129703392..129703416,+#_5be4114e7d0131f457d60e83d77a108dp@chr10:129703392..129703416, +
3.1e-50FFCP PHASE2:Hg19::chr17:39140411..39140419,-#_5be4114e7d0131f457d60e83d77a108dp5@KRT40
3.1e-50FFCP PHASE2:Hg19::chr4:6324309..6324314,-#_5be4114e7d0131f457d60e83d77a108dp43@PPP2R2C
3.1e-50FFCP PHASE1:Hg19::chr19:46763803..46763808,-#_5be4114e7d0131f457d60e83d77a108dp@chr19:46763803..46763808, -
3.1e-50FFCP PHASE2:Hg19::chr6:154858693..154858698,+#_5be4114e7d0131f457d60e83d77a108dp@chr6:154858693..154858698, +
3.1e-50FFCP PHASE2:Hg19::chr19:46763326..46763349,+#_5be4114e7d0131f457d60e83d77a108dp@chr19:46763326..46763349, +
3.1e-50FFCP PHASE2:Hg19::chr14:57127856..57127863,+#_5be4114e7d0131f457d60e83d77a108dp@chr14:57127856..57127863, +
3.1e-50FFCP PHASE2:Hg19::chr10:66459172..66459188,-#_5be4114e7d0131f457d60e83d77a108dp@chr10:66459172..66459188, -
3.1e-50FFCP PHASE1:Hg19::chr3:145094664..145094665,+#_5be4114e7d0131f457d60e83d77a108dp@chr3:145094664..145094665, +
3.1e-50FFCP PHASE2:Hg19::chrX:97443927..97443947,+#_5be4114e7d0131f457d60e83d77a108dp@chrX:97443927..97443947, +
3.1e-50FFCP PHASE1:Hg19::chr4:169849979..169849990,-#_5be4114e7d0131f457d60e83d77a108dp@chr4:169849979..169849990, -
3.1e-50FFCP PHASE2:Hg19::chr8:85893922..85893940,+#_5be4114e7d0131f457d60e83d77a108dp@chr8:85893922..85893940, +
3.1e-50FFCP PHASE1:Hg19::chr2:130568628..130568649,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:130568628..130568649, +
3.1e-50FFCP PHASE2:Hg19::chr2:208001650..208001675,-#_5be4114e7d0131f457d60e83d77a108dp@chr2:208001650..208001675, -
3.1e-50FFCP PHASE1:Hg19::chr14:60194331..60194336,-#_5be4114e7d0131f457d60e83d77a108dp36@RTN1
3.1e-50FFCP PHASE2:Hg19::chr2:130564567..130564572,-#_5be4114e7d0131f457d60e83d77a108dp2@LOC100131048
3.1e-50FFCP PHASE2:Hg19::chr15:85564362..85564385,+#_5be4114e7d0131f457d60e83d77a108dp@chr15:85564362..85564385, +
3.1e-50FFCP PHASE1:Hg19::chr8:98015305..98015315,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:98015305..98015315, -
3.1e-50FFCP PHASE1:Hg19::chr7:79839919..79839924,+#_5be4114e7d0131f457d60e83d77a108dp@chr7:79839919..79839924, +
3.1e-50FFCP PHASE2:Hg19::chr8:97972117..97972120,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:97972117..97972120, -
3.1e-50FFCP PHASE2:Hg19::chr5:134915254..134915270,-#_5be4114e7d0131f457d60e83d77a108dp3@CXCL14
3.1e-50FFCP PHASE2:Hg19::chr17:79970753..79970763,+#_5be4114e7d0131f457d60e83d77a108dp15@ASPSCR1
3.1e-50FFCP PHASE1:Hg19::chrX:135764624..135764645,-#_5be4114e7d0131f457d60e83d77a108dp@chrX:135764624..135764645, -
3.1e-50FFCP PHASE1:Hg19::chr7:84390545..84390550,+#_5be4114e7d0131f457d60e83d77a108dp@chr7:84390545..84390550, +
3.1e-50FFCP PHASE1:Hg19::chr2:97626185..97626188,-#_5be4114e7d0131f457d60e83d77a108dp@chr2:97626185..97626188, -
3.1e-50FFCP PHASE2:Hg19::chrX:135761853..135761876,-#_5be4114e7d0131f457d60e83d77a108dp@chrX:135761853..135761876, -
3.1e-50FFCP PHASE2:Hg19::chr16:13010590..13010593,+#_5be4114e7d0131f457d60e83d77a108dp@chr16:13010590..13010593, +
3.1e-50FFCP PHASE2:Hg19::chr9:129291797..129291800,-#_5be4114e7d0131f457d60e83d77a108dp@chr9:129291797..129291800, -
3.1e-50FFCP PHASE1:Hg19::chr7:26590606..26590616,-#_5be4114e7d0131f457d60e83d77a108dp@chr7:26590606..26590616, -
3.1e-50FFCP PHASE2:Hg19::chrX:69542573..69542578,+#_5be4114e7d0131f457d60e83d77a108dp@chrX:69542573..69542578, +
3.1e-50FFCP PHASE2:Hg19::chr7:26590563..26590574,-#_5be4114e7d0131f457d60e83d77a108dp@chr7:26590563..26590574, -
3.1e-50FFCP PHASE2:Hg19::chr16:66088105..66088108,-#_5be4114e7d0131f457d60e83d77a108dp@chr16:66088105..66088108, -
3.1e-50FFCP PHASE1:Hg19::chr14:59113338..59113345,+#_5be4114e7d0131f457d60e83d77a108dp@chr14:59113338..59113345, +
3.1e-50FFCP PHASE2:Hg19::chr2:103235035..103235044,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:103235035..103235044, +
3.1e-50FFCP PHASE2:Hg19::chr11:86502231..86502240,-#_5be4114e7d0131f457d60e83d77a108dp@chr11:86502231..86502240, -
3.1e-50FFCP PHASE2:Hg19::chr8:139510692..139510697,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:139510692..139510697, -
3.1e-50FFCP PHASE1:Hg19::chr2:68113370..68113379,-#_5be4114e7d0131f457d60e83d77a108dp@chr2:68113370..68113379, -

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