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DOID:5409

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Name:lung small cell carcinoma
Namespace:FANTOM
Xrefs:
links:

MSH:D055752
NCI:C4917
OMIM:182280
SNOMEDCT_2010_1_31:254632001
SNOMEDCT_2010_1_31:254633006

UMLS_CUI:C0149925
Synonyms: "Oat cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254633006]
"SCLC" EXACT [CSP2005:2017-6589]
"small cell carcinoma of lung" RELATED []
"small cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254632001]
"small cell neuroendocrine carcinoma of lung" EXACT [NCI2004_11_17:C4917]
Comments:OMIM mapping confirmed by DO. [SN].

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:3905(lung carcinoma)



Children
NA

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:5409 (lung small cell carcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.55e-98FFCP PHASE1:Hg19::chr6:125378873..125378876,+#_5a0cadd9f97072f65b901942816bde31p@chr6:125378873..125378876, +
1.55e-98FFCP PHASE2:Hg19::chr6:125378873..125378876,+#_5a0cadd9f97072f65b901942816bde31p@chr6:125378873..125378876, +
2.4e-66FFCP PHASE1:Hg19::chr8:40525350..40525354,-#_40c90676995a138ba0819dfe8db6fb93p@chr8:40525350..40525354, -
2.4e-66FFCP PHASE2:Hg19::chr8:40525350..40525354,-#_40c90676995a138ba0819dfe8db6fb93p@chr8:40525350..40525354, -
3.1e-50FFCP PHASE2:Hg19::chr12:27925654..27925663,-#_5be4114e7d0131f457d60e83d77a108dp@chr12:27925654..27925663, -
3.1e-50FFCP PHASE1:Hg19::chr6:154729003..154729006,-#_5be4114e7d0131f457d60e83d77a108dp@chr6:154729003..154729006, -
3.1e-50FFCP PHASE2:Hg19::chr6:998897..998898,-#_5be4114e7d0131f457d60e83d77a108dp@chr6:998897..998898, -
3.1e-50FFCP PHASE1:Hg19::chr5:6961030..6961034,+#_5be4114e7d0131f457d60e83d77a108dp@chr5:6961030..6961034, +
3.1e-50FFCP PHASE1:Hg19::chr13:76549637..76549662,+#_5be4114e7d0131f457d60e83d77a108dp@chr13:76549637..76549662, +
3.1e-50FFCP PHASE1:Hg19::chr8:72938203..72938230,+#_5be4114e7d0131f457d60e83d77a108dp@chr8:72938203..72938230, +
3.1e-50FFCP PHASE1:Hg19::chr3:86701902..86701920,-#_5be4114e7d0131f457d60e83d77a108dp@chr3:86701902..86701920, -
3.1e-50FFCP PHASE2:Hg19::chr3:86289712..86289720,+#_5be4114e7d0131f457d60e83d77a108dp@chr3:86289712..86289720, +
3.1e-50FFCP PHASE1:Hg19::chr14:60194446..60194457,-#_5be4114e7d0131f457d60e83d77a108dp16@RTN1
3.1e-50FFCP PHASE1:Hg19::chr6:125378772..125378777,+#_5be4114e7d0131f457d60e83d77a108dp@chr6:125378772..125378777, +
3.1e-50FFCP PHASE2:Hg19::chr9:125306070..125306106,+#_5be4114e7d0131f457d60e83d77a108dp@chr9:125306070..125306106, +
3.1e-50FFCP PHASE2:Hg19::chr6:140771120..140771128,+#_5be4114e7d0131f457d60e83d77a108dp@chr6:140771120..140771128, +
3.1e-50FFCP PHASE1:Hg19::chr1:33705218..33705225,-#_5be4114e7d0131f457d60e83d77a108dp@chr1:33705218..33705225, -
3.1e-50FFCP PHASE1:Hg19::chr12:84664700..84664710,+#_5be4114e7d0131f457d60e83d77a108dp1@ENST00000547882
3.1e-50FFCP PHASE2:Hg19::chr12:79756320..79756329,-#_5be4114e7d0131f457d60e83d77a108dp@chr12:79756320..79756329, -
3.1e-50FFCP PHASE1:Hg19::chr2:97626442..97626445,-#_5be4114e7d0131f457d60e83d77a108dp@chr2:97626442..97626445, -
3.1e-50FFCP PHASE2:Hg19::chr8:116215335..116215378,+#_5be4114e7d0131f457d60e83d77a108dp@chr8:116215335..116215378, +
3.1e-50FFCP PHASE1:Hg19::chr2:23850233..23850248,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:23850233..23850248, +
3.1e-50FFCP PHASE2:Hg19::chr7:26482694..26482710,-#_5be4114e7d0131f457d60e83d77a108dp@chr7:26482694..26482710, -
3.1e-50FFCP PHASE2:Hg19::chr2:238385078..238385087,-#_5be4114e7d0131f457d60e83d77a108dp@chr2:238385078..238385087, -
3.1e-50FFCP PHASE1:Hg19::chr12:46124855..46124858,+#_5be4114e7d0131f457d60e83d77a108dp@chr12:46124855..46124858, +
3.1e-50FFCP PHASE2:Hg19::chr14:36966895..36966899,-#_5be4114e7d0131f457d60e83d77a108dp@chr14:36966895..36966899, -
3.1e-50FFCP PHASE1:Hg19::chr7:26482715..26482738,-#_5be4114e7d0131f457d60e83d77a108dp@chr7:26482715..26482738, -
3.1e-50FFCP PHASE1:Hg19::chr5:33619040..33619056,-#_5be4114e7d0131f457d60e83d77a108dp@chr5:33619040..33619056, -
3.1e-50FFCP PHASE1:Hg19::chr3:115898365..115898379,+#_5be4114e7d0131f457d60e83d77a108dp@chr3:115898365..115898379, +
3.1e-50FFCP PHASE1:Hg19::chr1:181360250..181360259,+#_5be4114e7d0131f457d60e83d77a108dp@chr1:181360250..181360259, +
3.1e-50FFCP PHASE1:Hg19::chr17:70939741..70939790,-#_5be4114e7d0131f457d60e83d77a108dp@chr17:70939741..70939790, -
3.1e-50FFCP PHASE1:Hg19::chr16:66088105..66088108,-#_5be4114e7d0131f457d60e83d77a108dp@chr16:66088105..66088108, -
3.1e-50FFCP PHASE1:Hg19::chr11:69640133..69640140,+#_5be4114e7d0131f457d60e83d77a108dp@chr11:69640133..69640140, +
3.1e-50FFCP PHASE2:Hg19::chr9:97856010..97856019,+#_5be4114e7d0131f457d60e83d77a108dp@chr9:97856010..97856019, +
3.1e-50FFCP PHASE1:Hg19::chr3:78334430..78334433,-#_5be4114e7d0131f457d60e83d77a108dp@chr3:78334430..78334433, -
3.1e-50FFCP PHASE1:Hg19::chr2:202413051..202413061,-#_5be4114e7d0131f457d60e83d77a108dp@chr2:202413051..202413061, -
3.1e-50FFCP PHASE2:Hg19::chr6:31681859..31681865,-#_5be4114e7d0131f457d60e83d77a108dp3@LY6G6E
3.1e-50FFCP PHASE2:Hg19::chr4:160189282..160189289,+#_5be4114e7d0131f457d60e83d77a108dp38@RAPGEF2
3.1e-50FFCP PHASE2:Hg19::chr2:103235211..103235247,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:103235211..103235247, +
3.1e-50FFCP PHASE2:Hg19::chr15:71685918..71685922,-#_5be4114e7d0131f457d60e83d77a108dp@chr15:71685918..71685922, -
3.1e-50FFCP PHASE1:Hg19::chr8:97961686..97961696,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:97961686..97961696, -
3.1e-50FFCP PHASE2:Hg19::chr20:54101133..54101144,+#_5be4114e7d0131f457d60e83d77a108dp@chr20:54101133..54101144, +
3.1e-50FFCP PHASE1:Hg19::chr10:129703377..129703388,+#_5be4114e7d0131f457d60e83d77a108dp@chr10:129703377..129703388, +
3.1e-50FFCP PHASE2:Hg19::chr10:129704382..129704389,+#_5be4114e7d0131f457d60e83d77a108dp@chr10:129704382..129704389, +
3.1e-50FFCP PHASE1:Hg19::chr4:41749788..41749795,-#_5be4114e7d0131f457d60e83d77a108dp10@PHOX2B
3.1e-50FFCP PHASE1:Hg19::chr2:234862409..234862414,+#_5be4114e7d0131f457d60e83d77a108dp14@TRPM8
3.1e-50FFCP PHASE2:Hg19::chr4:3838289..3838308,-#_5be4114e7d0131f457d60e83d77a108dp@chr4:3838289..3838308, -
3.1e-50FFCP PHASE2:Hg19::chr1:144618112..144618116,+#_5be4114e7d0131f457d60e83d77a108dp4@NBPF8
3.1e-50FFCP PHASE1:Hg19::chr7:21209872..21209910,+#_5be4114e7d0131f457d60e83d77a108dp@chr7:21209872..21209910, +
3.1e-50FFCP PHASE2:Hg19::chrX:97443927..97443947,+#_5be4114e7d0131f457d60e83d77a108dp@chrX:97443927..97443947, +
3.1e-50FFCP PHASE1:Hg19::chr2:241625540..241625541,+#_5be4114e7d0131f457d60e83d77a108dp14@ENST00000407635
3.1e-50FFCP PHASE2:Hg19::chr5:79097476..79097484,+#_5be4114e7d0131f457d60e83d77a108dp@chr5:79097476..79097484, +
3.1e-50FFCP PHASE1:Hg19::chr17:58979826..58979836,+#_5be4114e7d0131f457d60e83d77a108dp@chr17:58979826..58979836, +
3.1e-50FFCP PHASE2:Hg19::chr1:168756151..168756165,+#_5be4114e7d0131f457d60e83d77a108dp2@ENST00000420691
3.1e-50FFCP PHASE2:Hg19::chr12:46124855..46124858,+#_5be4114e7d0131f457d60e83d77a108dp@chr12:46124855..46124858, +
3.1e-50FFCP PHASE1:Hg19::chr9:17454025..17454033,+#_5be4114e7d0131f457d60e83d77a108dp@chr9:17454025..17454033, +
3.1e-50FFCP PHASE2:Hg19::chr8:97961686..97961696,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:97961686..97961696, -
3.1e-50FFCP PHASE2:Hg19::chr7:111234799..111234807,-#_5be4114e7d0131f457d60e83d77a108dp@chr7:111234799..111234807, -
3.1e-50FFCP PHASE2:Hg19::chr10:82723188..82723191,-#_5be4114e7d0131f457d60e83d77a108dp@chr10:82723188..82723191, -
3.1e-50FFCP PHASE1:Hg19::chr8:85893922..85893940,+#_5be4114e7d0131f457d60e83d77a108dp@chr8:85893922..85893940, +
3.1e-50FFCP PHASE2:Hg19::chr8:98070371..98070384,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:98070371..98070384, -
3.1e-50FFCP PHASE1:Hg19::chr2:51255348..51255351,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:51255348..51255351, +
3.1e-50FFCP PHASE2:Hg19::chr1:219599419..219599426,-#_5be4114e7d0131f457d60e83d77a108dp@chr1:219599419..219599426, -
3.1e-50FFCP PHASE2:Hg19::chr13:76688920..76688924,+#_5be4114e7d0131f457d60e83d77a108dp@chr13:76688920..76688924, +
3.1e-50FFCP PHASE1:Hg19::chr2:222160741..222160750,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:222160741..222160750, +
3.1e-50FFCP PHASE1:Hg19::chr16:13010455..13010466,+#_5be4114e7d0131f457d60e83d77a108dp@chr16:13010455..13010466, +
3.1e-50FFCP PHASE2:Hg19::chr3:95401928..95401936,-#_5be4114e7d0131f457d60e83d77a108dp3@ENST00000494840, p3@uc003dro.1
3.1e-50FFCP PHASE1:Hg19::chr14:89802926..89802934,-#_5be4114e7d0131f457d60e83d77a108dp@chr14:89802926..89802934, -
3.1e-50FFCP PHASE2:Hg19::chr2:135170047..135170048,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:135170047..135170048, +
3.1e-50FFCP PHASE2:Hg19::chr14:60958049..60958051,-#_5be4114e7d0131f457d60e83d77a108dp@chr14:60958049..60958051, -
3.1e-50FFCP PHASE1:Hg19::chr6:129513919..129513922,+#_5be4114e7d0131f457d60e83d77a108dp@chr6:129513919..129513922, +
3.1e-50FFCP PHASE2:Hg19::chr6:154858693..154858698,+#_5be4114e7d0131f457d60e83d77a108dp@chr6:154858693..154858698, +
3.1e-50FFCP PHASE1:Hg19::chr18:10085817..10085825,+#_5be4114e7d0131f457d60e83d77a108dp@chr18:10085817..10085825, +
3.1e-50FFCP PHASE2:Hg19::chr2:97626375..97626385,-#_5be4114e7d0131f457d60e83d77a108dp@chr2:97626375..97626385, -
3.1e-50FFCP PHASE2:Hg19::chr18:10085504..10085505,+#_5be4114e7d0131f457d60e83d77a108dp@chr18:10085504..10085505, +
3.1e-50FFCP PHASE2:Hg19::chr10:29213612..29213644,+#_5be4114e7d0131f457d60e83d77a108dp@chr10:29213612..29213644, +
3.1e-50FFCP PHASE1:Hg19::chr6:154858754..154858762,+#_5be4114e7d0131f457d60e83d77a108dp@chr6:154858754..154858762, +
3.1e-50FFCP PHASE2:Hg19::chr8:85893922..85893940,+#_5be4114e7d0131f457d60e83d77a108dp@chr8:85893922..85893940, +
3.1e-50FFCP PHASE1:Hg19::chr18:37420947..37420953,+#_5be4114e7d0131f457d60e83d77a108dp@chr18:37420947..37420953, +
3.1e-50FFCP PHASE2:Hg19::chr14:57127818..57127825,+#_5be4114e7d0131f457d60e83d77a108dp@chr14:57127818..57127825, +
3.1e-50FFCP PHASE1:Hg19::chr7:39018314..39018323,+#_5be4114e7d0131f457d60e83d77a108dp@chr7:39018314..39018323, +
3.1e-50FFCP PHASE2:Hg19::chr8:97972117..97972120,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:97972117..97972120, -
3.1e-50FFCP PHASE1:Hg19::chr16:7411388..7411391,+#_5be4114e7d0131f457d60e83d77a108dp@chr16:7411388..7411391, +
3.1e-50FFCP PHASE1:Hg19::chr13:76755731..76755739,+#_5be4114e7d0131f457d60e83d77a108dp@chr13:76755731..76755739, +
3.1e-50FFCP PHASE2:Hg19::chr16:7354636..7354645,-#_5be4114e7d0131f457d60e83d77a108dp@chr16:7354636..7354645, -
3.1e-50FFCP PHASE1:Hg19::chr8:73794113..73794122,+#_5be4114e7d0131f457d60e83d77a108dp@chr8:73794113..73794122, +
3.1e-50FFCP PHASE2:Hg19::chrX:135761853..135761876,-#_5be4114e7d0131f457d60e83d77a108dp@chrX:135761853..135761876, -
3.1e-50FFCP PHASE2:Hg19::chr3:86703154..86703166,-#_5be4114e7d0131f457d60e83d77a108dp@chr3:86703154..86703166, -
3.1e-50FFCP PHASE2:Hg19::chr2:220594710..220594720,+#_5be4114e7d0131f457d60e83d77a108dp3@ENST00000442416
3.1e-50FFCP PHASE2:Hg19::chr1:100110807..100110818,+#_5be4114e7d0131f457d60e83d77a108dp@chr1:100110807..100110818, +
3.1e-50FFCP PHASE2:Hg19::chr14:60194267..60194275,-#_5be4114e7d0131f457d60e83d77a108dp20@RTN1
3.1e-50FFCP PHASE1:Hg19::chr8:98073725..98073731,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:98073725..98073731, -
3.1e-50FFCP PHASE2:Hg19::chr9:129291797..129291800,-#_5be4114e7d0131f457d60e83d77a108dp@chr9:129291797..129291800, -
3.1e-50FFCP PHASE2:Hg19::chr2:91776712..91776739,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:91776712..91776739, +
3.1e-50FFCP PHASE2:Hg19::chr17:79974020..79974025,+#_5be4114e7d0131f457d60e83d77a108dp@chr17:79974020..79974025, +
3.1e-50FFCP PHASE2:Hg19::chr17:39140393..39140399,-#_5be4114e7d0131f457d60e83d77a108dp3@KRT40
3.1e-50FFCP PHASE2:Hg19::chr12:84126726..84126727,-#_5be4114e7d0131f457d60e83d77a108dp@chr12:84126726..84126727, -
3.1e-50FFCP PHASE1:Hg19::chr2:97626588..97626595,-#_5be4114e7d0131f457d60e83d77a108dp@chr2:97626588..97626595, -
3.1e-50FFCP PHASE2:Hg19::chrX:69542573..69542578,+#_5be4114e7d0131f457d60e83d77a108dp@chrX:69542573..69542578, +
3.1e-50FFCP PHASE2:Hg19::chr7:26590563..26590574,-#_5be4114e7d0131f457d60e83d77a108dp@chr7:26590563..26590574, -

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