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DOID:5409

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Name:lung small cell carcinoma
Namespace:FANTOM
Xrefs:
links:

MSH:D055752
NCI:C4917
OMIM:182280
SNOMEDCT_2010_1_31:254632001
SNOMEDCT_2010_1_31:254633006

UMLS_CUI:C0149925
Synonyms: "Oat cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254633006]
"SCLC" EXACT [CSP2005:2017-6589]
"small cell carcinoma of lung" RELATED []
"small cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254632001]
"small cell neuroendocrine carcinoma of lung" EXACT [NCI2004_11_17:C4917]
Comments:OMIM mapping confirmed by DO. [SN].

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:3905(lung carcinoma)



Children
NA

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:5409 (lung small cell carcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.55e-98FFCP PHASE1:Hg19::chr6:125378873..125378876,+#_5a0cadd9f97072f65b901942816bde31p@chr6:125378873..125378876, +
1.55e-98FFCP PHASE2:Hg19::chr6:125378873..125378876,+#_5a0cadd9f97072f65b901942816bde31p@chr6:125378873..125378876, +
2.4e-66FFCP PHASE1:Hg19::chr8:40525350..40525354,-#_40c90676995a138ba0819dfe8db6fb93p@chr8:40525350..40525354, -
2.4e-66FFCP PHASE2:Hg19::chr8:40525350..40525354,-#_40c90676995a138ba0819dfe8db6fb93p@chr8:40525350..40525354, -
3.1e-50FFCP PHASE2:Hg19::chr2:241625621..241625629,+#_5be4114e7d0131f457d60e83d77a108dp2@ENST00000407635
3.1e-50FFCP PHASE1:Hg19::chr12:58158560..58158567,-#_5be4114e7d0131f457d60e83d77a108dp@chr12:58158560..58158567, -
3.1e-50FFCP PHASE2:Hg19::chr9:17454062..17454088,+#_5be4114e7d0131f457d60e83d77a108dp@chr9:17454062..17454088, +
3.1e-50FFCP PHASE1:Hg19::chr2:103235035..103235044,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:103235035..103235044, +
3.1e-50FFCP PHASE1:Hg19::chr15:85564362..85564385,+#_5be4114e7d0131f457d60e83d77a108dp@chr15:85564362..85564385, +
3.1e-50FFCP PHASE2:Hg19::chr14:58045730..58045732,-#_5be4114e7d0131f457d60e83d77a108dp@chr14:58045730..58045732, -
3.1e-50FFCP PHASE1:Hg19::chr5:134907210..134907215,-#_5be4114e7d0131f457d60e83d77a108dp@chr5:134907210..134907215, -
3.1e-50FFCP PHASE1:Hg19::chr3:150914241..150914244,+#_5be4114e7d0131f457d60e83d77a108dp@chr3:150914241..150914244, +
3.1e-50FFCP PHASE1:Hg19::chr1:225650299..225650317,-#_5be4114e7d0131f457d60e83d77a108dp@chr1:225650299..225650317, -
3.1e-50FFCP PHASE2:Hg19::chr3:150914094..150914095,+#_5be4114e7d0131f457d60e83d77a108dp@chr3:150914094..150914095, +
3.1e-50FFCP PHASE1:Hg19::chr12:84664662..84664670,+#_5be4114e7d0131f457d60e83d77a108dp3@ENST00000547882
3.1e-50FFCP PHASE2:Hg19::chr10:129703363..129703373,+#_5be4114e7d0131f457d60e83d77a108dp@chr10:129703363..129703373, +
3.1e-50FFCP PHASE1:Hg19::chr7:79840127..79840130,+#_5be4114e7d0131f457d60e83d77a108dp@chr7:79840127..79840130, +
3.1e-50FFCP PHASE1:Hg19::chr16:13010590..13010593,+#_5be4114e7d0131f457d60e83d77a108dp@chr16:13010590..13010593, +
3.1e-50FFCP PHASE2:Hg19::chr2:222160774..222160804,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:222160774..222160804, +
3.1e-50FFCP PHASE2:Hg19::chr2:138685510..138685520,-#_5be4114e7d0131f457d60e83d77a108dp@chr2:138685510..138685520, -
3.1e-50FFCP PHASE2:Hg19::chr18:74671119..74671124,+#_5be4114e7d0131f457d60e83d77a108dp@chr18:74671119..74671124, +
3.1e-50FFCP PHASE2:Hg19::chr15:97503439..97503472,+#_5be4114e7d0131f457d60e83d77a108dp@chr15:97503439..97503472, +
3.1e-50FFCP PHASE2:Hg19::chr11:42142040..42142055,+#_5be4114e7d0131f457d60e83d77a108dp@chr11:42142040..42142055, +
3.1e-50FFCP PHASE2:Hg19::chr2:97626550..97626562,-#_5be4114e7d0131f457d60e83d77a108dp@chr2:97626550..97626562, -
3.1e-50FFCP PHASE2:Hg19::chr12:88178319..88178329,-#_5be4114e7d0131f457d60e83d77a108dp2@MKRN9P
3.1e-50FFCP PHASE1:Hg19::chr7:95775942..95775990,-#_5be4114e7d0131f457d60e83d77a108dp@chr7:95775942..95775990, -
3.1e-50FFCP PHASE1:Hg19::chr10:129704512..129704515,+#_5be4114e7d0131f457d60e83d77a108dp@chr10:129704512..129704515, +
3.1e-50FFCP PHASE1:Hg19::chr5:28571958..28571968,-#_5be4114e7d0131f457d60e83d77a108dp@chr5:28571958..28571968, -
3.1e-50FFCP PHASE1:Hg19::chr3:102635409..102635414,-#_5be4114e7d0131f457d60e83d77a108dp@chr3:102635409..102635414, -
3.1e-50FFCP PHASE2:Hg19::chrX:48394285..48394295,+#_5be4114e7d0131f457d60e83d77a108dp@chrX:48394285..48394295, +
3.1e-50FFCP PHASE1:Hg19::chr1:81686906..81686911,+#_5be4114e7d0131f457d60e83d77a108dp@chr1:81686906..81686911, +
3.1e-50FFCP PHASE1:Hg19::chr11:41519057..41519065,-#_5be4114e7d0131f457d60e83d77a108dp@chr11:41519057..41519065, -
3.1e-50FFCP PHASE1:Hg19::chr2:192805223..192805230,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:192805223..192805230, +
3.1e-50FFCP PHASE1:Hg19::chr18:39798771..39798780,-#_5be4114e7d0131f457d60e83d77a108dp@chr18:39798771..39798780, -
3.1e-50FFCP PHASE2:Hg19::chr2:189756256..189756260,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:189756256..189756260, +
3.1e-50FFCP PHASE2:Hg19::chr11:73475071..73475076,-#_5be4114e7d0131f457d60e83d77a108dp@chr11:73475071..73475076, -
3.1e-50FFCP PHASE1:Hg19::chr8:116215298..116215305,+#_5be4114e7d0131f457d60e83d77a108dp@chr8:116215298..116215305, +
3.1e-50FFCP PHASE1:Hg19::chr10:36850273..36850276,-#_5be4114e7d0131f457d60e83d77a108dp@chr10:36850273..36850276, -
3.1e-50FFCP PHASE1:Hg19::chr7:44574327..44574332,-#_5be4114e7d0131f457d60e83d77a108dp@chr7:44574327..44574332, -
3.1e-50FFCP PHASE2:Hg19::chr16:7428243..7428259,+#_5be4114e7d0131f457d60e83d77a108dp@chr16:7428243..7428259, +
3.1e-50FFCP PHASE1:Hg19::chr7:120381610..120381618,+#_5be4114e7d0131f457d60e83d77a108dp@chr7:120381610..120381618, +
3.1e-50FFCP PHASE2:Hg19::chr9:95426545..95426559,-#_5be4114e7d0131f457d60e83d77a108dp@chr9:95426545..95426559, -
3.1e-50FFCP PHASE2:Hg19::chr7:120378742..120378768,-#_5be4114e7d0131f457d60e83d77a108dp@chr7:120378742..120378768, -
3.1e-50FFCP PHASE1:Hg19::chr2:135120480..135120481,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:135120480..135120481, +
3.1e-50FFCP PHASE1:Hg19::chr18:6928495..6928520,-#_5be4114e7d0131f457d60e83d77a108dp2@LOC400643
3.1e-50FFCP PHASE2:Hg19::chr11:31093041..31093047,-#_5be4114e7d0131f457d60e83d77a108dp@chr11:31093041..31093047, -
3.1e-50FFCP PHASE1:Hg19::chr8:98104439..98104444,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:98104439..98104444, -
3.1e-50FFCP PHASE2:Hg19::chr8:98080543..98080550,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:98080543..98080550, -
3.1e-50FFCP PHASE2:Hg19::chr2:97626013..97626024,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:97626013..97626024, +
3.1e-50FFCP PHASE2:Hg19::chr12:84664662..84664670,+#_5be4114e7d0131f457d60e83d77a108dp3@ENST00000547882
3.1e-50FFCP PHASE2:Hg19::chrX:154251771..154251775,-#_5be4114e7d0131f457d60e83d77a108dp@chrX:154251771..154251775, -
3.1e-50FFCP PHASE1:Hg19::chr5:6961030..6961034,+#_5be4114e7d0131f457d60e83d77a108dp@chr5:6961030..6961034, +
3.1e-50FFCP PHASE1:Hg19::chr8:72938203..72938230,+#_5be4114e7d0131f457d60e83d77a108dp@chr8:72938203..72938230, +
3.1e-50FFCP PHASE1:Hg19::chr3:86701902..86701920,-#_5be4114e7d0131f457d60e83d77a108dp@chr3:86701902..86701920, -
3.1e-50FFCP PHASE2:Hg19::chr3:86289712..86289720,+#_5be4114e7d0131f457d60e83d77a108dp@chr3:86289712..86289720, +
3.1e-50FFCP PHASE1:Hg19::chr12:15722105..15722121,+#_5be4114e7d0131f457d60e83d77a108dp@chr12:15722105..15722121, +
3.1e-50FFCP PHASE1:Hg19::chr6:125378772..125378777,+#_5be4114e7d0131f457d60e83d77a108dp@chr6:125378772..125378777, +
3.1e-50FFCP PHASE2:Hg19::chr8:98015616..98015617,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:98015616..98015617, -
3.1e-50FFCP PHASE2:Hg19::chr7:79840117..79840122,+#_5be4114e7d0131f457d60e83d77a108dp@chr7:79840117..79840122, +
3.1e-50FFCP PHASE1:Hg19::chr1:33705218..33705225,-#_5be4114e7d0131f457d60e83d77a108dp@chr1:33705218..33705225, -
3.1e-50FFCP PHASE1:Hg19::chr14:36966895..36966899,-#_5be4114e7d0131f457d60e83d77a108dp@chr14:36966895..36966899, -
3.1e-50FFCP PHASE2:Hg19::chr12:79756320..79756329,-#_5be4114e7d0131f457d60e83d77a108dp@chr12:79756320..79756329, -
3.1e-50FFCP PHASE1:Hg19::chr2:97626442..97626445,-#_5be4114e7d0131f457d60e83d77a108dp@chr2:97626442..97626445, -
3.1e-50FFCP PHASE2:Hg19::chr7:95775942..95775990,-#_5be4114e7d0131f457d60e83d77a108dp@chr7:95775942..95775990, -
3.1e-50FFCP PHASE1:Hg19::chr2:23850233..23850248,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:23850233..23850248, +
3.1e-50FFCP PHASE2:Hg19::chr2:238385078..238385087,-#_5be4114e7d0131f457d60e83d77a108dp@chr2:238385078..238385087, -
3.1e-50FFCP PHASE2:Hg19::chr12:27925654..27925663,-#_5be4114e7d0131f457d60e83d77a108dp@chr12:27925654..27925663, -
3.1e-50FFCP PHASE1:Hg19::chr6:154729003..154729006,-#_5be4114e7d0131f457d60e83d77a108dp@chr6:154729003..154729006, -
3.1e-50FFCP PHASE1:Hg19::chr3:115898365..115898379,+#_5be4114e7d0131f457d60e83d77a108dp@chr3:115898365..115898379, +
3.1e-50FFCP PHASE2:Hg19::chr8:116215298..116215305,+#_5be4114e7d0131f457d60e83d77a108dp@chr8:116215298..116215305, +
3.1e-50FFCP PHASE1:Hg19::chr1:181360250..181360259,+#_5be4114e7d0131f457d60e83d77a108dp@chr1:181360250..181360259, +
3.1e-50FFCP PHASE1:Hg19::chr17:70939741..70939790,-#_5be4114e7d0131f457d60e83d77a108dp@chr17:70939741..70939790, -
3.1e-50FFCP PHASE1:Hg19::chr16:66088105..66088108,-#_5be4114e7d0131f457d60e83d77a108dp@chr16:66088105..66088108, -
3.1e-50FFCP PHASE1:Hg19::chr13:76688920..76688924,+#_5be4114e7d0131f457d60e83d77a108dp@chr13:76688920..76688924, +
3.1e-50FFCP PHASE1:Hg19::chr12:65516484..65516493,-#_5be4114e7d0131f457d60e83d77a108dp@chr12:65516484..65516493, -
3.1e-50FFCP PHASE1:Hg19::chr3:78334430..78334433,-#_5be4114e7d0131f457d60e83d77a108dp@chr3:78334430..78334433, -
3.1e-50FFCP PHASE1:Hg19::chr2:202413051..202413061,-#_5be4114e7d0131f457d60e83d77a108dp@chr2:202413051..202413061, -
3.1e-50FFCP PHASE2:Hg19::chr4:160189282..160189289,+#_5be4114e7d0131f457d60e83d77a108dp38@RAPGEF2
3.1e-50FFCP PHASE1:Hg19::chr14:60958049..60958051,-#_5be4114e7d0131f457d60e83d77a108dp@chr14:60958049..60958051, -
3.1e-50FFCP PHASE2:Hg19::chr2:103235211..103235247,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:103235211..103235247, +
3.1e-50FFCP PHASE2:Hg19::chr15:71685918..71685922,-#_5be4114e7d0131f457d60e83d77a108dp@chr15:71685918..71685922, -
3.1e-50FFCP PHASE1:Hg19::chr8:97961686..97961696,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:97961686..97961696, -
3.1e-50FFCP PHASE2:Hg19::chr20:54101133..54101144,+#_5be4114e7d0131f457d60e83d77a108dp@chr20:54101133..54101144, +
3.1e-50FFCP PHASE2:Hg19::chr10:129704382..129704389,+#_5be4114e7d0131f457d60e83d77a108dp@chr10:129704382..129704389, +
3.1e-50FFCP PHASE1:Hg19::chr4:41749788..41749795,-#_5be4114e7d0131f457d60e83d77a108dp10@PHOX2B
3.1e-50FFCP PHASE1:Hg19::chr2:234862409..234862414,+#_5be4114e7d0131f457d60e83d77a108dp14@TRPM8
3.1e-50FFCP PHASE2:Hg19::chr4:3838289..3838308,-#_5be4114e7d0131f457d60e83d77a108dp@chr4:3838289..3838308, -
3.1e-50FFCP PHASE2:Hg19::chr1:144618112..144618116,+#_5be4114e7d0131f457d60e83d77a108dp4@NBPF8
3.1e-50FFCP PHASE1:Hg19::chr12:51116443..51116452,+#_5be4114e7d0131f457d60e83d77a108dp@chr12:51116443..51116452, +
3.1e-50FFCP PHASE2:Hg19::chr14:36966895..36966899,-#_5be4114e7d0131f457d60e83d77a108dp@chr14:36966895..36966899, -
3.1e-50FFCP PHASE1:Hg19::chr10:129710296..129710320,-#_5be4114e7d0131f457d60e83d77a108dp@chr10:129710296..129710320, -
3.1e-50FFCP PHASE1:Hg19::chr7:26482715..26482738,-#_5be4114e7d0131f457d60e83d77a108dp@chr7:26482715..26482738, -
3.1e-50FFCP PHASE1:Hg19::chr5:33619040..33619056,-#_5be4114e7d0131f457d60e83d77a108dp@chr5:33619040..33619056, -
3.1e-50FFCP PHASE2:Hg19::chr12:46124855..46124858,+#_5be4114e7d0131f457d60e83d77a108dp@chr12:46124855..46124858, +
3.1e-50FFCP PHASE1:Hg19::chr9:17454025..17454033,+#_5be4114e7d0131f457d60e83d77a108dp@chr9:17454025..17454033, +
3.1e-50FFCP PHASE2:Hg19::chr8:72938203..72938230,+#_5be4114e7d0131f457d60e83d77a108dp@chr8:72938203..72938230, +
3.1e-50FFCP PHASE2:Hg19::chr6:64762702..64762707,+#_5be4114e7d0131f457d60e83d77a108dp@chr6:64762702..64762707, +
3.1e-50FFCP PHASE1:Hg19::chr14:60194267..60194275,-#_5be4114e7d0131f457d60e83d77a108dp20@RTN1
3.1e-50FFCP PHASE2:Hg19::chr10:82723188..82723191,-#_5be4114e7d0131f457d60e83d77a108dp@chr10:82723188..82723191, -
3.1e-50FFCP PHASE1:Hg19::chr8:85893922..85893940,+#_5be4114e7d0131f457d60e83d77a108dp@chr8:85893922..85893940, +

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