Personal tools

DOID:4305

From FANTOM5_SSTAR

Jump to: navigation, search

Name:bone giant cell tumor
Namespace:FANTOM
Definition:"A giant cell tumor and bone cancer and bone tissue neoplasm that results_in the presence of multinucleated giant cells (osteoclast-like cell)." [url:http://en.wikipedia.org/wiki/Giant_cell_tumor_of_bone]
Xrefs:
links:

MSH:D018212
NCI:C3738
SNOMEDCT_2010_1_31:189891002
SNOMEDCT_2010_1_31:57500000

UMLS_CUI:C0206638
Synonyms: "giant cell myeloma" RELATED []
"Giant cell neoplasm of bone" EXACT [NCI2004_11_17:C3738]
"Giant cell tumor of bone (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:57500000]
"Giant cell tumor of bone NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189891002]
"osteoclastoma" RELATED []

Ontology association
Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.

link to ontology dataset
data


Parents

is_a:DOID:200(giant cell tumor)



Children
NA

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

Mouse (Mus musculus)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:4305 (bone giant cell tumor), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
1.55e-98FFCP PHASE2:Hg19::chr16:77317713..77317723,+#_7ed111051ee50c8d468df346ae9ad8c4p1@CU687665
1.55e-98FFCP PHASE1:Hg19::chr11:101742272..101742276,-#_7ed111051ee50c8d468df346ae9ad8c4p@chr11:101742272..101742276, -
1.55e-98FFCP PHASE1:Hg19::chr16:77317713..77317723,+#_7ed111051ee50c8d468df346ae9ad8c4p1@CU687665
1.55e-98FFCP PHASE2:Hg19::chr11:101742272..101742276,-#_7ed111051ee50c8d468df346ae9ad8c4p@chr11:101742272..101742276, -
2.74e-50FFCP PHASE2:Hg19::chr11:81551043..81551054,-#_e0f6011b79f6ab97eaf39001b71c40d1p@chr11:81551043..81551054, -
2.74e-50FFCP PHASE1:Hg19::chr5:14034644..14034647,-#_e0f6011b79f6ab97eaf39001b71c40d1p@chr5:14034644..14034647, -
2.74e-50FFCP PHASE1:Hg19::chr18:71197490..71197495,-#_e0f6011b79f6ab97eaf39001b71c40d1p@chr18:71197490..71197495, -
2.74e-50FFCP PHASE2:Hg19::chr18:71197490..71197495,-#_e0f6011b79f6ab97eaf39001b71c40d1p@chr18:71197490..71197495, -
2.74e-50FFCP PHASE2:Hg19::chr16:51670868..51670880,-#_e0f6011b79f6ab97eaf39001b71c40d1p@chr16:51670868..51670880, -
2.74e-50FFCP PHASE2:Hg19::chr5:14034644..14034647,-#_e0f6011b79f6ab97eaf39001b71c40d1p@chr5:14034644..14034647, -
2.74e-50FFCP PHASE1:Hg19::chr11:81551043..81551054,-#_e0f6011b79f6ab97eaf39001b71c40d1p@chr11:81551043..81551054, -
2.74e-50FFCP PHASE1:Hg19::chr16:51670868..51670880,-#_e0f6011b79f6ab97eaf39001b71c40d1p@chr16:51670868..51670880, -
4.52e-50FFCP PHASE1:Hg19::chr3:45174403..45174415,+#_9ef95a30dedef4f0008d93116c9046f7p@chr3:45174403..45174415, +
4.52e-50FFCP PHASE1:Hg19::chr5:23952305..23952310,+#_9ef95a30dedef4f0008d93116c9046f7p@chr5:23952305..23952310, +
4.52e-50FFCP PHASE2:Hg19::chr3:106393655..106393659,+#_9ef95a30dedef4f0008d93116c9046f7p@chr3:106393655..106393659, +
4.52e-50FFCP PHASE1:Hg19::chr4:34480309..34480321,-#_9ef95a30dedef4f0008d93116c9046f7p@chr4:34480309..34480321, -
4.52e-50FFCP PHASE2:Hg19::chr4:34480309..34480321,-#_9ef95a30dedef4f0008d93116c9046f7p@chr4:34480309..34480321, -
4.52e-50FFCP PHASE2:Hg19::chr5:23952305..23952310,+#_9ef95a30dedef4f0008d93116c9046f7p@chr5:23952305..23952310, +
4.52e-50FFCP PHASE1:Hg19::chr3:106393655..106393659,+#_9ef95a30dedef4f0008d93116c9046f7p@chr3:106393655..106393659, +
4.52e-50FFCP PHASE2:Hg19::chr3:45174403..45174415,+#_9ef95a30dedef4f0008d93116c9046f7p@chr3:45174403..45174415, +
3.61e-34FFCP PHASE1:Hg19::chr7:119353807..119353812,-#_ab62f2cc60b1de40435821172856fd1bp@chr7:119353807..119353812, -
3.61e-34FFCP PHASE2:Hg19::chr4:177796841..177796851,+#_ab62f2cc60b1de40435821172856fd1bp1@ENST00000508790
3.61e-34FFCP PHASE2:Hg19::chr7:119353807..119353812,-#_ab62f2cc60b1de40435821172856fd1bp@chr7:119353807..119353812, -
3.61e-34FFCP PHASE1:Hg19::chr4:177796841..177796851,+#_ab62f2cc60b1de40435821172856fd1bp1@ENST00000508790
5.04e-34FFCP PHASE2:Hg19::chr4:46093758..46093781,-#_f41b98629bbbd04915bd67b54a96957fp@chr4:46093758..46093781, -
5.04e-34FFCP PHASE1:Hg19::chr8:15939682..15939688,+#_f41b98629bbbd04915bd67b54a96957fp@chr8:15939682..15939688, +
5.04e-34FFCP PHASE1:Hg19::chrX:132231123..132231140,-#_f41b98629bbbd04915bd67b54a96957fp1@USP26
5.04e-34FFCP PHASE2:Hg19::chr10:37004821..37004852,-#_f41b98629bbbd04915bd67b54a96957fp@chr10:37004821..37004852, -
5.04e-34FFCP PHASE2:Hg19::chrX:132231123..132231140,-#_f41b98629bbbd04915bd67b54a96957fp1@USP26
5.04e-34FFCP PHASE1:Hg19::chr4:46093758..46093781,-#_f41b98629bbbd04915bd67b54a96957fp@chr4:46093758..46093781, -
5.04e-34FFCP PHASE2:Hg19::chr8:15939682..15939688,+#_f41b98629bbbd04915bd67b54a96957fp@chr8:15939682..15939688, +
5.04e-34FFCP PHASE1:Hg19::chr10:37004821..37004852,-#_f41b98629bbbd04915bd67b54a96957fp@chr10:37004821..37004852, -
7.05e-34FFCP PHASE2:Hg19::chr6:155427848..155427862,+#_d4769f045c502929ac3c7af5f4396835p@chr6:155427848..155427862, +
7.05e-34FFCP PHASE1:Hg19::chr11:84019133..84019135,-#_d4769f045c502929ac3c7af5f4396835p@chr11:84019133..84019135, -
7.05e-34FFCP PHASE1:Hg19::chr6:155427848..155427862,+#_d4769f045c502929ac3c7af5f4396835p@chr6:155427848..155427862, +
7.05e-34FFCP PHASE2:Hg19::chrX:89462083..89462089,+#_d4769f045c502929ac3c7af5f4396835p@chrX:89462083..89462089, +
7.05e-34FFCP PHASE1:Hg19::chrX:89462083..89462089,+#_d4769f045c502929ac3c7af5f4396835p@chrX:89462083..89462089, +
7.05e-34FFCP PHASE2:Hg19::chr11:84019133..84019135,-#_d4769f045c502929ac3c7af5f4396835p@chr11:84019133..84019135, -
5.5e-31FFCP PHASE1:Hg19::chr3:106556598..106556609,-#_e496c2c709cd2dcf224911a87bc128acp@chr3:106556598..106556609, -
5.5e-31FFCP PHASE2:Hg19::chr3:106556598..106556609,-#_e496c2c709cd2dcf224911a87bc128ac-, p@chr3:106556598..106556609
7.1e-28FFCP PHASE2:Hg19::chr6:68597008..68597030,-#_bb53379a2eb545bfdf745f2ac32e98b7p@chr6:68597008..68597030, -
7.1e-28FFCP PHASE1:Hg19::chr6:68597008..68597030,-#_bb53379a2eb545bfdf745f2ac32e98b7p@chr6:68597008..68597030, -
4.32e-26FFCP PHASE2:Hg19::chr5:27723923..27723927,-#_7deba072a8e859155596e968775af6cb-, p@chr5:27723923..27723927
4.32e-26FFCP PHASE2:Hg19::chr11:81549961..81549965,-#_7deba072a8e859155596e968775af6cbp@chr11:81549961..81549965, -
4.32e-26FFCP PHASE1:Hg19::chr5:27723923..27723927,-#_7deba072a8e859155596e968775af6cbp@chr5:27723923..27723927, -
4.32e-26FFCP PHASE1:Hg19::chr11:81549961..81549965,-#_7deba072a8e859155596e968775af6cbp@chr11:81549961..81549965, -
5.56e-26FFCP PHASE2:Hg19::chr5:167315847..167315852,+#_c80d487a6e817589c900afbb93dbfd90p@chr5:167315847..167315852, +
5.56e-26FFCP PHASE2:Hg19::chrX:89176902..89176913,+#_c80d487a6e817589c900afbb93dbfd90p1@TGIF2LX
5.56e-26FFCP PHASE1:Hg19::chr5:153673183..153673186,+#_c80d487a6e817589c900afbb93dbfd90p@chr5:153673183..153673186, +
5.56e-26FFCP PHASE1:Hg19::chr4:189864018..189864037,+#_c80d487a6e817589c900afbb93dbfd90p@chr4:189864018..189864037, +
5.56e-26FFCP PHASE1:Hg19::chrX:89176902..89176913,+#_c80d487a6e817589c900afbb93dbfd90p1@TGIF2LX
5.56e-26FFCP PHASE1:Hg19::chrX:124347061..124347063,-#_c80d487a6e817589c900afbb93dbfd90p@chrX:124347061..124347063, -
5.56e-26FFCP PHASE1:Hg19::chrX:132352373..132352384,-#_c80d487a6e817589c900afbb93dbfd90p1@TFDP3
5.56e-26FFCP PHASE2:Hg19::chrX:124347061..124347063,-#_c80d487a6e817589c900afbb93dbfd90p@chrX:124347061..124347063, -
5.56e-26FFCP PHASE2:Hg19::chrX:132352373..132352384,-#_c80d487a6e817589c900afbb93dbfd90p1@TFDP3
5.56e-26FFCP PHASE2:Hg19::chr5:153673183..153673186,+#_c80d487a6e817589c900afbb93dbfd90+, p@chr5:153673183..153673186
5.56e-26FFCP PHASE1:Hg19::chr5:167315847..167315852,+#_c80d487a6e817589c900afbb93dbfd90p@chr5:167315847..167315852, +
5.56e-26FFCP PHASE2:Hg19::chr4:189864018..189864037,+#_c80d487a6e817589c900afbb93dbfd90p@chr4:189864018..189864037, +
9.18e-26FFCP PHASE1:Hg19::chr7:12997533..12997536,+#_7cb554a3be6f1e1f1750765ed49edd61p@chr7:12997533..12997536, +
9.18e-26FFCP PHASE2:Hg19::chr18:14946224..14946236,+#_7cb554a3be6f1e1f1750765ed49edd61p1@FLJ44255
9.18e-26FFCP PHASE2:Hg19::chr7:12997533..12997536,+#_7cb554a3be6f1e1f1750765ed49edd61p@chr7:12997533..12997536, +
9.18e-26FFCP PHASE1:Hg19::chr18:14946224..14946236,+#_7cb554a3be6f1e1f1750765ed49edd61p1@FLJ44255
1.12e-25FFCP PHASE1:Hg19::chrX:55246809..55246816,+#_ea35632256d617fc4aa7782b62ea6c01p3@PAGE5
1.12e-25FFCP PHASE2:Hg19::chrX:55246809..55246816,+#_ea35632256d617fc4aa7782b62ea6c01p3@PAGE5
4.89e-23FFCP PHASE1:Hg19::chrX:55246818..55246829,+#_2ff1d85f571b4c90c88d903f14890bf9p2@PAGE5
4.89e-23FFCP PHASE2:Hg19::chrX:55246818..55246829,+#_2ff1d85f571b4c90c88d903f14890bf9p2@PAGE5
3.11e-21FFCP PHASE1:Hg19::chr8:119905427..119905438,-#_750b580536651862c4b550d01876a709p@chr8:119905427..119905438, -
3.11e-21FFCP PHASE2:Hg19::chr5:27742047..27742052,-#_750b580536651862c4b550d01876a709p@chr5:27742047..27742052, -
3.11e-21FFCP PHASE2:Hg19::chr12:127737083..127737103,-#_750b580536651862c4b550d01876a709p@chr12:127737083..127737103, -
3.11e-21FFCP PHASE1:Hg19::chr5:27742047..27742052,-#_750b580536651862c4b550d01876a709p@chr5:27742047..27742052, -
3.11e-21FFCP PHASE1:Hg19::chr12:127737083..127737103,-#_750b580536651862c4b550d01876a709p@chr12:127737083..127737103, -
3.11e-21FFCP PHASE2:Hg19::chr8:119905427..119905438,-#_750b580536651862c4b550d01876a709p@chr8:119905427..119905438, -
3.81e-21FFCP PHASE1:Hg19::chr5:135378750..135378757,+#_0b51979573f15edf592b0c0e5ff92a47p@chr5:135378750..135378757, +
3.81e-21FFCP PHASE1:Hg19::chr2:145815206..145815208,+#_0b51979573f15edf592b0c0e5ff92a47p@chr2:145815206..145815208, +
3.81e-21FFCP PHASE2:Hg19::chr5:135378750..135378757,+#_0b51979573f15edf592b0c0e5ff92a47p@chr5:135378750..135378757, +
3.81e-21FFCP PHASE1:Hg19::chr9:118595109..118595124,+#_0b51979573f15edf592b0c0e5ff92a47p@chr9:118595109..118595124, +
3.81e-21FFCP PHASE1:Hg19::chr13:87732242..87732246,-#_0b51979573f15edf592b0c0e5ff92a47p@chr13:87732242..87732246, -
3.81e-21FFCP PHASE2:Hg19::chr13:87732242..87732246,-#_0b51979573f15edf592b0c0e5ff92a47p@chr13:87732242..87732246, -
3.81e-21FFCP PHASE1:Hg19::chr19:9811101..9811112,-#_0b51979573f15edf592b0c0e5ff92a47p3@ZNF812
3.81e-21FFCP PHASE2:Hg19::chr2:145815206..145815208,+#_0b51979573f15edf592b0c0e5ff92a47p@chr2:145815206..145815208, +
3.81e-21FFCP PHASE2:Hg19::chr9:118595109..118595124,+#_0b51979573f15edf592b0c0e5ff92a47p@chr9:118595109..118595124, +
3.81e-21FFCP PHASE2:Hg19::chr19:9811101..9811112,-#_0b51979573f15edf592b0c0e5ff92a47p3@ZNF812
4.66e-21FFCP PHASE2:Hg19::chrX:140336680..140336697,-#_6cb1b3b1294637a4dfae3a283113a6fbp2@SPANXC
4.66e-21FFCP PHASE1:Hg19::chrX:140336680..140336697,-#_6cb1b3b1294637a4dfae3a283113a6fbp2@SPANXC
5.7e-21FFCP PHASE2:Hg19::chr5:142000787..142000807,-#_c2d5abe31e307e7978eaf7549d19dbfbp@chr5:142000787..142000807, -
5.7e-21FFCP PHASE2:Hg19::chr2:33171944..33171945,+#_c2d5abe31e307e7978eaf7549d19dbfbp15@LTBP1
5.7e-21FFCP PHASE1:Hg19::chr2:33171944..33171945,+#_c2d5abe31e307e7978eaf7549d19dbfbp15@LTBP1
5.7e-21FFCP PHASE1:Hg19::chr5:142000787..142000807,-#_c2d5abe31e307e7978eaf7549d19dbfbp@chr5:142000787..142000807, -
6.96e-21FFCP PHASE2:Hg19::chr3:60761167..60761179,+#_7d29bb6144fa86059a7c4591caf2c2ddp@chr3:60761167..60761179, +
6.96e-21FFCP PHASE1:Hg19::chr3:60761167..60761179,+#_7d29bb6144fa86059a7c4591caf2c2ddp@chr3:60761167..60761179, +
6.96e-21FFCP PHASE2:Hg19::chr11:12061317..12061323,-#_7d29bb6144fa86059a7c4591caf2c2ddp@chr11:12061317..12061323, -
6.96e-21FFCP PHASE2:Hg19::chr11:28792916..28792929,+#_7d29bb6144fa86059a7c4591caf2c2ddp@chr11:28792916..28792929, +
6.96e-21FFCP PHASE1:Hg19::chr18:63273310..63273317,+#_7d29bb6144fa86059a7c4591caf2c2ddp@chr18:63273310..63273317, +
6.96e-21FFCP PHASE2:Hg19::chr18:63273310..63273317,+#_7d29bb6144fa86059a7c4591caf2c2ddp@chr18:63273310..63273317, +
6.96e-21FFCP PHASE1:Hg19::chr5:81611412..81611423,+#_7d29bb6144fa86059a7c4591caf2c2ddp@chr5:81611412..81611423, +
6.96e-21FFCP PHASE1:Hg19::chr11:12061317..12061323,-#_7d29bb6144fa86059a7c4591caf2c2ddp@chr11:12061317..12061323, -
6.96e-21FFCP PHASE1:Hg19::chr11:28792916..28792929,+#_7d29bb6144fa86059a7c4591caf2c2ddp@chr11:28792916..28792929, +
6.96e-21FFCP PHASE2:Hg19::chr8:76774227..76774234,+#_7d29bb6144fa86059a7c4591caf2c2dd+, p@chr8:76774227..76774234
6.96e-21FFCP PHASE1:Hg19::chr8:76774227..76774234,+#_7d29bb6144fa86059a7c4591caf2c2ddp@chr8:76774227..76774234, +
6.96e-21FFCP PHASE2:Hg19::chr5:81611412..81611423,+#_7d29bb6144fa86059a7c4591caf2c2ddp@chr5:81611412..81611423, +