Personal tools

EntrezGene:68750

From FANTOM5_SSTAR

Jump to: navigation, search

Symbol:Rreb1
Description:ras responsive element binding protein 1
Synonyms:1110037N09Rik, AA414966, B930013M22Rik
Species:Mouse (Mus musculus)
Xrefs:
EntrezGene:68750
MGI:2443664
Ensembl:ENSMUSG00000039087
Vega:OTTMUSG00000033132
Associated motifs:JASPAR motif:MA0073.1
Novel motif ID name
1 motif1_TCGNAG
10 motif10_SCGGAGASN
100 motif100_GCYTNCTC
101 motif101_NAGCAASA
102 motif102_GCAAMGT
103 motif103_CGGCTAWWT
104 motif104_GTWSGMT
105 motif105_KTNGNAGWMG
106 motif106_KCGCANTC
107 motif107_CGTCTGCGTA
108 motif108_AACKSARM
109 motif109_TCNMTMGC
11 motif11_GCGANT
110 motif110_AGTCGCAGCG
111 motif111_WWAATYCGCTCC
112 motif112_CGYGYAWT
113 motif113_YGAGCTRTG
114 motif114_AAACCCGCTC
115 motif115_CATCAACTAC
116 motif116_CCAARA
117 motif117_SKSNGCGCTSN
118 motif118_AATCCGGCT
119 motif119_TCAAAANCG
12 motif12_ACTAAG
120 motif120_TTSMTGNNGKTG
121 motif121_TGCAWTGTA
122 motif122_TACAAYGGM
123 motif123_TTGATGCAGTGA
124 motif124_AATNCANCACT
125 motif125_TTTAACTCGT
126 motif126_AATGCAGTCG
127 motif127_TTTTTACCCTC
128 motif128_NNGNATRCGWN
129 motif129_CTCGTAATCT
13 motif13_GAGGATGCK
130 motif130_TTTCAAACNCCC
131 motif131_CTGCTTAAATA
132 motif132_TCRCCAGWY
133 motif133_TWTAWAGTWGRAG
134 motif134_ATAAGAGAGGC
135 motif135_TNKYTGCAKA
136 motif136_GTCTGCGTCTCT
137 motif137_MAACAGAAGY
138 motif138_CTTTWANNYCC
139 motif139_CGTTCGAATT
14 motif14_TCNACG
140 motif140_WTAAATAACG
141 motif141_TTAAACGGC
142 motif142_TCATATAGAGAAGC
143 motif143_ATGATGTG
144 motif144_AAKCMSGT
145 motif145_GMAGWCGMAW
146 motif146_AGACGAAGA
147 motif147_ATATCCAGTG
148 motif148_NTCSYSTYT
149 motif149_CAAGCTGTACA
15 motif15_ACTGTG
150 motif150_AGCACAGGCG
151 motif151_GCCYGTGCMKCW
152 motif152_GCKYRMKCGS
153 motif153_ACTYNYYATYG
154 motif154_GRWGGCAARCG
155 motif155_AATARSTCCC
156 motif156_ACTGTAGGACMT
157 motif157_AAACTWACC
158 motif158_SRCGWYACA
159 motif159_ACACATACTACA
16 motif16_ACCAG
160 motif160_AGCCGGTAACG
161 motif161_CGGCTTGATT
162 motif162_AGTTACCGTCA
163 motif163_GARTCGCCCTGTNA
164 motif164_AGCCGATTTG
165 motif165_AAAGTTACTG
166 motif166_TAMAACTTTGS
167 motif167_TTGGGTAGGAG
168 motif168_TCTCAGAGTATAAA
169 motif169_GCCTGGCC
17 motif17_CGCTAN
18 motif18_CATCAG
19 motif19_GYTGGMC
2 motif2_GCTGGAGG
20 motif20_TGNAGC
21 motif21_TCTTGA
22 motif22_GGMCTG
23 motif23_CGCNAT
24 motif24_AGAACT
25 motif25_GATCCN
26 motif26_CTCCGCAGTA
27 motif27_CCTGCA
28 motif28_CGTNCA
29 motif29_TAGCTCGGCT
3 motif3_CGCTNA
30 motif30_AGNTCC
31 motif31_AGNCGT
32 motif32_TRGNMCTNNT
33 motif33_AGAGCATGAGACGG
34 motif34_GANCCT
35 motif35_CGCCYAGA
36 motif36_AAGGAGRAN
37 motif37_GCTCGCA
38 motif38_TCGNCA
39 motif39_CCAAGT
4 motif4_TGTCTA
40 motif40_ATGCGGAGGAG
41 motif41_TSACAA
42 motif42_CGNTCA
43 motif43_CCCWGT
44 motif44_TGAAGST
45 motif45_GCTCNGG
46 motif46_CGNAGT
47 motif47_CGAGTN
48 motif48_CANTCG
49 motif49_ACAGRG
5 motif5_CAGTGT
50 motif50_GTCCNA
51 motif51_CGGNTA
52 motif52_CGNATG
53 motif53_ANGCTG
54 motif54_CGNGTA
55 motif55_CGTTATAGCC
56 motif56_GANCGT
57 motif57_AGGCAT
58 motif58_CGGNAT
59 motif59_NCWCCARNR
6 motif6_AAGACT
60 motif60_GCGNAT
61 motif61_KAYMGMTN
62 motif62_CGNGAT
63 motif63_GTNCCA
64 motif64_AGTCGN
65 motif65_TNGCGA
66 motif66_ACCGRTCA
67 motif67_GNTAAC
68 motif68_CTTTTAAAC
69 motif69_RYKNAAATC
7 motif7_CGNATC
70 motif70_MAATCGC
71 motif71_CTCCGCW
72 motif72_CAGAAMC
73 motif73_GAGCKMGC
74 motif74_TTKAAAY
75 motif75_AGCCGAGCGCT
76 motif76_GGAGCAGCCAAT
77 motif77_TCCTTGG
78 motif78_NCGNWGCAWN
79 motif79_ACATCTACAA
8 motif8_CCATGN
80 motif80_CTCTGAGAGAA
81 motif81_NGCAGAA
82 motif82_TTGAATCGCGG
83 motif83_TTWTAAA
84 motif84_GGKTTYT
85 motif85_TWNNGCSNA
86 motif86_CGCACAGACCGCGC
87 motif87_RCGCACWS
88 motif88_CCCTCTTT
89 motif89_CGCCGTGTTTA
9 motif9_ANGGCT
90 motif90_TTATATCGC
91 motif91_TTCTTTCG
92 motif92_GCGKWWNAA
93 motif93_TANTMTCTRWAT
94 motif94_CATYTSA
95 motif95_AGCGAGCTAGC
96 motif96_TKNTTCTGTCTN
97 motif97_TTCCCT
98 motif98_GCCGAAGATT
99 motif99_GYGTSANACG
Transcripton Factor?: Yes

TSS regions


TSS peak ID Short description
Mm9::chr13:37870253..37870272,+ p13@Rreb1
Mm9::chr13:37870281..37870293,+ p10@Rreb1
Mm9::chr13:37870307..37870337,+ p5@Rreb1
Mm9::chr13:37870342..37870369,+ p18@Rreb1
Mm9::chr13:37870391..37870400,+ p19@Rreb1
Mm9::chr13:37917716..37917742,+ p9@Rreb1
Mm9::chr13:37917863..37917872,+ p14@Rreb1
Mm9::chr13:37917887..37917913,+ p1@Rreb1
Mm9::chr13:37917925..37917950,+ p4@Rreb1
Mm9::chr13:37918094..37918119,+ p6@Rreb1
Mm9::chr13:37918486..37918575,+ p2@Rreb1
Mm9::chr13:37918661..37918673,+ p17@Rreb1
Mm9::chr13:37918684..37918701,+ p12@Rreb1
Mm9::chr13:37918773..37918818,+ p3@Rreb1
Mm9::chr13:37949830..37949861,+ p7@Rreb1



View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


TSS expression




Sample

p1@Rreb1

p2@Rreb1

p3@Rreb1

p4@Rreb1

p5@Rreb1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.000.000.000.000.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.898.383.143.840.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I69.108.643.643.180.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I310.5910.893.936.650.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I412.028.521.504.510.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.883.863.193.530.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I87.014.673.742.340.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E97.232.580.771.940.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.790.146.484.650.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.981.405.153.510.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E67.881.200.860.680.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F16.780.480.960.640.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E421.912.050.683.080.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E813.201.660.703.320.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A110.332.330.006.661.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A38.911.821.213.851.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.900.701.400.700.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A227.601.260.636.940.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A430.032.470.277.951.10
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A626.742.121.278.061.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.935.784.002.380.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H27.844.171.992.380.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I99.403.132.352.870.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.043.683.363.520.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.284.362.060.920.00
GP2+ M cell, pool1.CNhs13228.11845-124H94.021.721.152.870.57
GP2+ M cell, pool2.CNhs13231.11846-124I13.456.462.582.580.00
GP2+ M cell, pool3.CNhs13240.11847-124I23.236.032.801.940.65
Ileum epithelium, pool1.CNhs13199.10252-104B95.895.322.281.710.57
Ileum epithelium, pool2.CNhs13232.10253-104C19.834.793.533.020.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.432.441.112.000.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.991.913.183.810.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.081.233.084.310.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.000.000.000.000.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F58.671.160.583.760.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.822.161.502.160.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.722.251.634.080.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G87.1213.393.351.268.79
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H17.816.252.342.3412.50
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H35.7610.993.141.575.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G96.4722.943.532.9410.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H29.5615.712.733.429.56
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H46.3112.624.373.408.74
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.773.273.020.630.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.351.822.841.010.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.752.942.750.920.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.696.263.912.350.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.531.960.220.220.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.082.201.541.540.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.923.691.561.170.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.962.801.821.400.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.881.441.440.000.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A220.970.840.674.870.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I915.231.451.452.900.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A117.811.681.012.350.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.602.573.090.260.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.726.022.292.011.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.093.095.160.521.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.810.810.400.610.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.000.000.000.530.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.631.900.000.630.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.361.361.691.360.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.785.342.670.890.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C79.004.950.453.1514.85
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E75.937.914.945.9319.78
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.977.822.132.1320.60
Mouse Microglia, donor1.CNhs12629.11718-123C82.705.392.701.505.69
Mouse Microglia, donor2.CNhs12634.11736-123E81.153.460.771.154.23
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.210.830.410.100.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.950.410.410.140.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.210.630.210.000.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.861.140.290.570.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.773.311.100.881.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.610.610.120.000.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.100.770.290.000.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.000.000.000.000.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.401.102.200.001.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.061.661.401.150.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.150.920.921.540.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.260.920.130.530.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.551.370.180.370.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.521.041.040.000.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.951.951.122.230.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.251.130.561.131.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.363.360.922.291.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.472.360.290.590.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.852.281.280.140.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.190.930.370.370.37
Mouse Schwann, donor1.CNhs12507.11728-123D93.102.202.571.440.00
Mouse Schwann, donor2.CNhs12573.11746-123F93.554.913.170.830.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G38.9919.718.704.932.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.442.580.862.580.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.042.041.360.000.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C89.177.564.322.700.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.8511.054.553.250.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F610.309.414.032.690.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.045.342.112.390.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.582.392.732.050.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.382.342.341.560.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.892.471.771.410.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.371.410.851.970.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H115.403.855.135.130.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I820.3810.192.5512.740.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B635.557.110.0014.220.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.033.463.251.520.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.314.052.530.510.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.532.533.542.020.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.714.803.543.080.46
accessory axillary lymph node, adult.CNhs10475.1063-29H913.469.061.813.378.29
adrenal gland, adult.CNhs10508.49-24D710.988.466.383.862.08
adrenal gland, embryo E14.CNhs11038.406-44C53.306.424.862.080.00
adrenal gland, embryo E16.CNhs11004.1254-43D61.526.704.261.221.22
adrenal gland, embryo E17.CNhs11043.1263-45I13.234.385.072.080.46
adrenal gland, embryo E18.CNhs11026.1262-18F54.226.036.181.510.60
adrenal gland, neonate N00.CNhs11191.1311-23C17.177.296.582.702.00
adrenal gland, neonate N25.CNhs11223.1377-27I36.287.794.523.521.13
amnion, adult pregnant day17.5.CNhs10488.583-22A86.677.1713.841.984.20
aorta, adult.CNhs10498.46-23H19.8315.187.099.982.46
bone (os femoris), adult.CNhs10483.56-12G25.317.085.311.7710.62
bone (os femoris), neonate N02.CNhs11227.1985-43F55.996.153.884.532.26
bone (os femoris), neonate N16.CNhs11225.1525-43A68.397.954.205.523.53
bone (os femoris), neonate N20.CNhs11195.1350-25C38.734.853.884.364.36
cecum, adult.CNhs10467.37-13H416.7811.181.860.001.86
cerebellum, adult.CNhs10494.15-8B23.813.810.884.680.59
cerebellum, neonate N30.CNhs11135.1395-42I22.721.680.8410.261.05
colon, adult.CNhs10468.36-18H712.016.132.304.091.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C76.471.441.922.400.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.201.800.601.800.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D46.353.183.432.800.38
corpora quadrigemina, adult.CNhs10501.16-22A40.601.500.300.451.95
corpus striatum, adult.CNhs10487.19-21D82.754.120.920.461.37
corpus striatum, neonate N00.CNhs11226.630-43F10.500.880.130.000.25
cortex, adult.CNhs10473.12-14D55.742.780.870.871.56
cortex, neonate N30.CNhs11107.1392-42F22.302.300.260.771.53
diencephalon, adult.CNhs10482.20-12F22.292.911.662.081.25
diencephalon, neonate N30.CNhs11201.1388-42B22.604.061.620.811.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.973.562.041.321.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A28.838.713.863.863.61
epididymis, adult.CNhs10490.58-23B211.129.606.322.270.25
eyeball, adult.CNhs10484.31-12G416.2020.625.267.585.26
eyeball, embryo E12.CNhs11016.345-16C61.562.081.560.521.04
eyeball, embryo E14.CNhs10521.399-16E22.301.611.380.231.84
eyeball, embryo E15.CNhs10593.426-16C92.162.522.160.722.34
eyeball, embryo E17.CNhs11023.1261-18D43.013.771.362.265.27
eyeball, neonate N00.CNhs11207.633-15C63.334.152.313.064.76
eyeball, neonate N01.CNhs11140.1532-43E73.727.432.313.595.77
eyeball, neonate N02.CNhs11205.1551-44G84.226.932.906.093.94
eyeball, neonate N16.CNhs11188.777-19A25.1712.423.104.142.07
forelimb, embryo E11.CNhs10596.335-25E20.863.661.290.860.43
forelimb, embryo E12.CNhs10600.359-14H23.033.781.891.700.76
forelimb, embryo E13.CNhs10589.384-1E22.644.574.052.461.58
forelimb, embryo E14.CNhs10577.413-26A82.634.385.040.660.44
forelimb, embryo E15.CNhs11007.437-20E73.616.405.561.951.95
forelimb, embryo E17.CNhs10598.1517-43C46.627.6610.802.091.74
forelimb, embryo E18.CNhs11008.1520-43B55.1410.086.171.851.85
gonad, embryo E13.CNhs11044.1564-45I61.396.973.581.790.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C89.132.111.400.702.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.692.833.092.830.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.112.271.994.260.85
heart, embryo E11.CNhs10586.331-24E93.113.311.662.281.24
heart, embryo E12.CNhs11015.353-12F51.644.462.352.581.17
heart, embryo E13.CNhs11013.376-3I93.063.961.442.700.90
heart, embryo E14.CNhs10597.403-26D43.084.503.083.791.18
heart, embryo E15.CNhs11017.431-16C83.745.313.154.722.36
heart, embryo E16.CNhs11021.457-17C63.555.713.554.781.23
heart, embryo E17.CNhs11025.479-18E55.353.723.496.512.09
heart, embryo E18.CNhs11030.1283-20G35.375.634.023.760.27
heart, neonate N00.CNhs11213.639-21E35.725.372.696.191.28
heart, neonate N03.CNhs11221.1349-25I25.105.433.787.571.81
heart, neonate N10.CNhs11118.749-24G16.247.554.274.931.97
heart, neonate N16.CNhs11209.782-15G110.058.194.868.511.78
heart, neonate N20.CNhs11127.821-26I610.387.162.349.652.19
heart, neonate N25.CNhs11196.1351-25D36.817.253.294.392.85
heart, neonate N30.CNhs11202.1390-42D27.526.173.228.322.82
hippocampus, adult.CNhs10478.13-16E86.945.681.891.892.10
hippocampus, neonate N00.CNhs11228.627-43G10.820.410.100.310.72
intestinal mucosa, adult.CNhs10506.860-29I39.5815.201.983.300.66
intestine, adult.CNhs10496.178-9A311.6414.024.234.230.26
intestine, embryo E12.CNhs11019.1251-16I51.922.562.990.851.07
intestine, embryo E13.CNhs11010.381-16D53.483.954.642.090.70
intestine, embryo E15.CNhs10602.976-16D86.964.643.872.840.77
intestine, embryo E16.CNhs10585.463-22H49.485.243.235.240.61
intestine, embryo E17.CNhs10582.482-18D38.234.673.565.560.89
intestine, embryo E18.CNhs10526.1289-20F77.045.144.183.230.57
intestine, neonate N00.CNhs11126.644-26D19.499.025.223.320.47
intestine, neonate N01.CNhs11192.1322-23E910.057.255.443.951.81
intestine, neonate N06.CNhs11102.688-20B811.815.533.775.532.51
intestine, neonate N07.CNhs11095.720-20F210.745.173.983.781.99
intestine, neonate N10.CNhs11098.755-23A57.995.854.873.701.17
intestine, neonate N20.CNhs11187.827-18D112.584.490.008.090.00
intestine, neonate N25.CNhs11121.1352-25E37.785.841.953.031.73
intestine, neonate N30.CNhs11131.1384-42G18.565.181.195.181.39
kidney, embryo E14.CNhs10606.411-4I93.602.663.790.570.38
kidney, embryo E15.CNhs10997.434-16F83.433.313.771.600.57
kidney, embryo E16.CNhs10584.464-22A57.893.385.641.131.13
kidney, embryo E17.CNhs11028.483-18I25.505.704.892.440.81
kidney, embryo E18.CNhs11001.1288-20C74.274.275.241.161.16
kidney, neonate N00.CNhs11214.646-21G75.054.074.002.601.26
kidney, neonate N10.CNhs11206.758-6D55.636.205.752.281.20
kidney, neonate N20.CNhs11113.832-19I18.415.765.172.210.59
kidney, neonate N25.CNhs11122.1353-25F39.114.554.401.881.10
kidney, neonate N30.CNhs11203.1385-42H17.032.841.972.471.85
liver, adult pregnant day01.CNhs10466.508-5B27.417.417.411.482.37
liver, embryo E12.CNhs10601.355-15F82.503.341.502.841.33
liver, embryo E13.CNhs10524.378-3H64.522.750.793.931.97
liver, embryo E14.CNhs10594.409-16E13.822.922.023.600.45
liver, embryo E15.CNhs10520.433-16D75.683.851.422.641.62
liver, embryo E16.CNhs10523.462-17F55.793.381.215.063.62
liver, embryo E17.CNhs10510.481-18A34.074.841.782.804.07
liver, embryo E18.CNhs10579.499-43G46.047.774.032.592.59
liver, neonate N00.CNhs11117.641-24F45.843.893.401.463.24
liver, neonate N03.CNhs11123.1345-25G23.845.222.472.470.82
liver, neonate N06.CNhs11101.684-20A812.947.192.888.637.19
liver, neonate N07.CNhs11103.716-20H26.333.726.332.234.47
liver, neonate N10.CNhs11115.751-24B99.365.624.375.622.81
liver, neonate N20.CNhs11220.823-25A37.586.824.042.782.27
liver, neonate N25.CNhs11198.1368-26H16.463.232.872.691.79
liver, neonate N30.CNhs11106.1382-42D13.862.411.457.240.96
lung, adult.CNhs10474.28-22B17.0217.925.543.511.85
lung, embryo E12.CNhs10522.354-16G22.843.603.600.760.57
lung, embryo E14.CNhs10604.404-26F83.265.215.052.282.44
lung, embryo E15.CNhs11020.432-17C53.239.005.942.381.36
lung, embryo E16.CNhs10998.458-17B64.9311.277.983.992.35
lung, embryo E17.CNhs10605.480-44A67.7119.9314.573.523.52
lung, embryo E18.CNhs10583.1287-20I67.1418.8112.625.002.62
lung, neonate N00.CNhs11224.640-42C67.2217.3711.514.681.76
lung, neonate N06.CNhs11212.683-20E56.7812.7711.983.003.78
lung, neonate N07.CNhs11111.715-19A37.5312.629.743.762.88
lung, neonate N10.CNhs11219.750-23E67.8116.9010.525.101.75
lung, neonate N20.CNhs11109.822-18A410.3223.277.544.101.97
lung, neonate N25.CNhs11119.1359-25C78.6312.436.224.662.24
lung, neonate N30.CNhs11133.1394-42H29.4014.756.655.213.47
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.033.021.516.0312.06
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A16.535.981.093.8115.23
mammary gland, adult lactating day02.CNhs10480.595-22B66.3928.527.871.482.95
mammary gland, adult pregnant day19.CNhs10476.588-5H27.4528.1516.001.663.04
medulla oblongata, adult.CNhs10477.17-12C21.441.280.481.121.77
medulla oblongata, neonate N30.CNhs11200.1396-42A31.521.050.350.590.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.131.970.160.980.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C29.592.522.523.791.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.892.210.321.260.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.731.172.730.390.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.231.942.801.080.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.544.783.821.430.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.685.122.672.670.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.685.943.681.130.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.242.832.020.810.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.463.511.171.750.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.983.951.190.400.00
olfactory brain, adult.CNhs10489.18-22I95.783.862.571.291.29
ovary, adult.CNhs10507.91-2I78.379.375.254.542.70
ovary, embryo E18.CNhs11040.505-44H71.424.103.561.601.60
ovary, neonate N00.CNhs11217.1299-22I44.074.073.261.301.63
oviduct, adult pregnant day01.CNhs10500.988-6G68.589.405.943.132.47
pancreas, adult.CNhs10486.34-16E413.277.961.336.640.00
pancreas, embryo E14.CNhs11012.405-44F42.434.865.341.460.97
pancreas, embryo E15.CNhs11042.1556-45F23.336.052.421.511.21
pancreas, embryo E16.CNhs11003.460-26E55.855.093.395.660.57
pancreas, embryo E17.CNhs10599.1558-45G37.094.724.434.132.07
pancreas, embryo E18.CNhs10580.1535-43I77.995.844.925.532.46
pancreas, neonate N00.CNhs11105.645-26G97.754.653.104.392.33
pancreas, neonate N01.CNhs11138.1531-43D74.365.094.364.734.36
pancreas, neonate N02.CNhs11139.1539-43D810.345.703.924.992.50
pancreas, neonate N16.CNhs11136.787-43B68.535.370.959.170.95
pancreas, neonate N25.CNhs11094.1555-45E22.112.114.226.332.11
pancreas, neonate N30.CNhs11182.1548-44H57.225.161.036.192.06
pituitary gland, adult.CNhs10493.21-1G89.878.852.723.060.68
pituitary gland, embryo E12.CNhs11018.346-16E61.442.881.081.441.08
pituitary gland, embryo E13.CNhs11009.370-44C72.073.360.911.161.42
pituitary gland, embryo E14.CNhs11037.398-44A53.643.221.501.071.50
pituitary gland, embryo E15.CNhs10592.427-16B94.795.501.952.481.95
pituitary gland, embryo E16.CNhs11036.449-43F64.284.993.211.961.43
pituitary gland, embryo E17.CNhs11039.1265-44F52.634.611.151.652.30
pituitary gland, neonate N00.CNhs11190.1308-22E96.393.041.522.740.61
placenta, adult pregnant day10.CNhs10472.539-13I76.5711.734.221.410.47
placenta, adult pregnant day17.CNhs10464.577-18G32.9710.385.722.540.42
prostate, adult.CNhs10470.859-1F87.724.851.322.213.97
skin, adult.CNhs10492.30-1C315.6614.5110.392.642.31
skin, neonate N00.CNhs11124.650-25G49.6913.896.782.742.26
skin, neonate N03.CNhs11215.662-22H38.5610.379.534.581.75
skin, neonate N06.CNhs11097.693-20I510.8610.276.802.982.39
skin, neonate N10.CNhs11108.762-6C49.6814.777.222.301.81
small intestine, neonate N16.CNhs11114.790-21I110.499.045.546.700.58
spinal cord, adult.CNhs10505.24-13C92.231.300.370.740.93
spleen, adult.CNhs10465.25-2G29.746.831.542.732.73
spleen, embryo E16.CNhs11035.461-43C14.338.467.222.483.71
spleen, embryo E18.CNhs11011.1271-21F24.637.967.413.523.52
spleen, neonate N10.CNhs11116.752-24D15.274.902.262.642.26
spleen, neonate N20.CNhs11112.824-19H19.844.511.644.651.23
spleen, neonate N25.CNhs11099.1354-25G39.153.662.294.581.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.932.893.404.080.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.723.221.681.542.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.913.873.043.321.66
stomach, adult.CNhs10503.33-1H60.950.000.950.951.91
stomach, embryo E12.CNhs10588.356-43E32.853.802.371.740.32
stomach, embryo E15.CNhs10603.1252-16G86.107.324.273.053.46
stomach, embryo E16.CNhs11022.459-17D45.296.703.672.481.62
stomach, embryo E17.CNhs11006.1035-18D56.696.903.553.352.51
stomach, embryo E18.CNhs10999.1286-20C67.647.214.372.843.49
stomach, neonate N03.CNhs11193.1340-24B85.938.095.932.973.10
stomach, neonate N07.CNhs11210.718-18A98.187.193.313.223.64
stomach, neonate N25.CNhs11104.1355-25E48.117.071.573.404.71
stomach, neonate N30.CNhs11134.1386-42I19.856.094.022.461.68
submandibular gland, adult.CNhs10469.59-29C117.4010.568.088.088.08
testis, adult.CNhs10504.57-7G51.690.562.250.560.00
testis, embryo E13.CNhs11031.389-23F52.549.276.583.441.20
testis, embryo E15.CNhs11034.443-27C51.654.964.471.990.83
testis, embryo E16.CNhs11033.470-26G51.947.003.503.500.97
testis, embryo E17.CNhs11029.486-18I53.235.815.552.710.52
testis, embryo E18.CNhs11027.503-18G53.388.286.424.220.84
testis, neonate N00.CNhs11189.1300-22B73.876.346.453.640.94
testis, neonate N07.CNhs11222.726-26I44.954.694.825.860.65
testis, neonate N10.CNhs11204.763-44D93.365.358.603.460.94
testis, neonate N20.CNhs11110.839-18H31.452.423.142.170.24
testis, neonate N30.CNhs11130.1391-42E23.461.153.172.020.58
thymus, adult.CNhs10471.38-12B59.805.063.792.531.90
thymus, embryo E14.CNhs11041.402-44I45.074.052.032.231.01
thymus, embryo E15.CNhs11005.430-45I25.244.312.772.881.23
thymus, embryo E16.CNhs11002.456-26C55.853.121.953.121.17
thymus, embryo E17.CNhs10581.478-18C111.642.691.972.862.33
thymus, embryo E18.CNhs10595.1273-19G411.524.772.784.170.79
thymus, neonate N02.CNhs11181.1541-43F89.503.253.494.451.56
thymus, neonate N03.CNhs11137.2104-43C711.672.952.074.872.36
thymus, neonate N06.CNhs11197.681-26C410.503.132.524.242.22
thymus, neonate N07.CNhs11211.713-19D311.352.821.304.951.83
thymus, neonate N10.CNhs11194.748-24E48.873.832.724.642.92
thymus, neonate N20.CNhs11186.820-7A212.284.972.834.292.34
thymus, neonate N25.CNhs11125.1362-25G712.992.983.665.002.21
thymus, neonate N30.CNhs11132.1393-42G215.084.093.866.433.16
tongue, adult.CNhs10499.32-1B410.207.713.173.172.72
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.339.323.552.890.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.447.271.881.260.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.357.722.691.340.50
urinary bladder, adult.CNhs10481.879-12E48.114.834.833.282.51
uterus, adult pregnant day19.CNhs10497.590-15F57.887.513.942.066.38
uterus, adult.CNhs10509.92-27E511.7213.746.595.494.40
vagina, adult.CNhs10502.89-27D59.4312.868.152.572.57
vesicular gland, adult.CNhs10491.51-27F811.0310.531.504.013.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.560.561.130.000.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.460.460.460.921.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.151.150.000.000.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.371.030.520.340.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.432.060.690.692.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.510.760.000.000.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.680.000.680.000.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.802.250.001.350.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.910.450.000.000.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.141.550.520.522.07
whole body, embryo E11.CNhs11014.324-5I80.931.561.350.830.42
whole body, embryo E12.CNhs10587.857-27C92.395.194.392.000.80
whole body, embryo E13.CNhs10512.372-23H24.611.542.731.371.02
whole body, embryo E14.5.CNhs10578.420-27D23.659.975.593.650.97
whole body, embryo E14.CNhs10519.395-14B13.354.612.521.680.84
whole body, embryo E16.CNhs10514.453-14F22.946.072.023.131.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.897.784.222.222.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.394.942.685.152.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.499.635.133.212.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.058.093.793.541.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.326.083.553.551.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.348.683.774.722.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.157.215.243.651.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.357.753.844.871.98
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.976.894.485.462.13
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.765.242.383.332.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.106.144.985.451.85
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.946.943.095.791.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.776.186.185.361.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.776.333.834.271.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.435.495.493.771.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.798.703.554.083.02
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.537.395.725.961.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.698.723.922.912.62
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.938.663.764.051.69
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.917.363.815.161.61
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.307.503.843.662.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.956.844.743.162.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.987.064.895.021.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.295.615.053.373.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.756.413.803.911.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.737.684.536.502.76
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.325.322.058.181.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.116.823.254.961.55
whole body, embryo E17.5.CNhs10513.490-9F96.177.915.213.861.74
whole body, embryo E17.CNhs10517.475-3I53.505.502.753.000.50
whole body, embryo E18.CNhs10516.493-3B37.027.954.442.812.11
whole body, neonate N00.CNhs10525.657-19C28.386.025.372.582.15
whole body, neonate N01.CNhs10576.659-23C67.655.363.634.022.10
whole body, neonate N06.CNhs10515.692-21D15.965.073.093.532.65
whole body, neonate N10.CNhs10518.761-6B45.336.263.944.873.48






  • Click each plot point to find sample in table

ENCODE TF ChIP-seq peak enrichment analysis Analyst: Erik Arner
Summary: For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained.


link to source dataset.
data


No analysis results for this cluster

DetailsSummary:It includes sequences from the international sequence collaboration, Swiss-Prot, and RefSeq. The RefSeq subset of this file is also available as gene2refseq.

links to source dataset.
human
mouse


GeneID:68750
LocusTag:RP23-361M19.2
chromosome:13
map location:13 A3.3, 13, 13 A3.3;;13
type of gene:protein-coding
Symbol from
nomenclature authority:
Rreb1
Full name from
nomenclature authority:
ras responsive element binding protein 1
Nomenclature status:O
Other designations:RAS-responsive zinc finger transcription factor RREB, RREB-1, ras-responsive element-binding protein 1, RAS-responsive zinc finger transcription factor RREB;;RREB-1;;ras-responsive element-binding protein 1
Modification date:15.01.2012