UBERON:0000072
From FANTOM5_SSTAR
Name: | segment of respiratory tract | ||
---|---|---|---|
Namespace: | FANTOM | ||
Definition: | "An organ segment that is part of a respiratory tract [Obol]." [OBOL:automatic] | ||
Xrefs: |
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Synonyms: | "respiratory tract" RELATED [MA:0000434] | ||
Comments: | Note that MA:0000434 has subclasses upper and lower, so it corresponds to a segment of the tract, rather than the tract as a whole |
Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.
link to ontology dataset
data
Parents
is_a: | UBERON:0000063(organ segment),UBERON:0004119(endoderm-derived structure) |
---|---|
part_of: | UBERON:0000065(respiratory tract) |
Children
is a: | UBERON:0001557 (upper respiratory tract),UBERON:0001558 (lower respiratory tract),UBERON:0002186 (bronchiole) |
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part of: | UBERON:0004802 (respiratory tract epithelium) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10029-101E2 (trachea, adult, pool1)
- 10058-101H4 (trachea, fetal, donor1)
- 10099-102C9
- 10275-104E5
- 10303-104H6
- 10331-105B7
- 10408-106B3 (lung adenocarcinoma cell line:PC-14)
- 10457-106G7 (squamous cell lung carcinoma cell line:LC-1F)
- 10462-106H3
- 10468-106H9
... further results Mouse (Mus musculus)
- 10029-101E2 (trachea, adult, pool1)
- 10058-101H4 (trachea, fetal, donor1)
- 10099-102C9
- 10275-104E5
- 10303-104H6
- 10331-105B7
- 10408-106B3 (lung adenocarcinoma cell line:PC-14)
- 10457-106G7 (squamous cell lung carcinoma cell line:LC-1F)
- 10462-106H3
- 10468-106H9
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000072 (segment of respiratory tract), sorted by p-values
Analyst: Hideya Kawaji
link to source dataset
human : data
mouse : data
P-value | FFCP | Short description |
---|---|---|
6.59e-58 | FFCP PHASE2:Mm9::chr6:41483113..41483131,+#_5669da61545a854c3a0d12d74ce419c3 | p4@uc009bpa.1 |
6.59e-58 | FFCP PHASE1:Mm9::chr6:41483113..41483131,+#_5669da61545a854c3a0d12d74ce419c3 | p4@uc009bpa.1 |
4.47e-57 | FFCP PHASE2:Mm9::chr6:41483037..41483046,+#_5a405d23179773a8be9cdb73cbeb8831 | p8@uc009bpa.1 |
4.47e-57 | FFCP PHASE1:Mm9::chr6:41483037..41483046,+#_5a405d23179773a8be9cdb73cbeb8831 | p8@uc009bpa.1 |
1.73e-55 | FFCP PHASE2:Mm9::chr6:41485075..41485096,+#_efe78cfa36f93121935dd5deaa0af182 | p1@ENSMUST00000103288, p1@uc009bpl.1 |
1.73e-55 | FFCP PHASE1:Mm9::chr6:41485075..41485096,+#_efe78cfa36f93121935dd5deaa0af182 | p1@ENSMUST00000103288, p1@uc009bpl.1 |
1.82e-54 | FFCP PHASE1:Mm9::chr6:41491752..41491776,-#_fcf46c76edce8a88518945785d677c2f | p@chr6:41491752..41491776, - |
1.82e-54 | FFCP PHASE2:Mm9::chr6:41491752..41491776,-#_fcf46c76edce8a88518945785d677c2f | p@chr6:41491752..41491776, - |
1.82e-54 | FFCP PHASE2:Mm9::chr12:108361918..108361930,-#_fcf46c76edce8a88518945785d677c2f | p@chr12:108361918..108361930, - |
1.82e-54 | FFCP PHASE1:Mm9::chr12:108361918..108361930,-#_fcf46c76edce8a88518945785d677c2f | p@chr12:108361918..108361930, - |
2.68e-53 | FFCP PHASE2:Mm9::chr6:41483173..41483188,+#_b4c83541cfa3bae6d09d33e32ba86bf2 | p2@ENSMUST00000103283 |
2.68e-53 | FFCP PHASE1:Mm9::chr6:41483173..41483188,+#_b4c83541cfa3bae6d09d33e32ba86bf2 | p2@ENSMUST00000103283 |
3.26e-53 | FFCP PHASE2:Mm9::chr6:41484803..41484826,+#_aa81a274d688877b02964924f7d1d45a | p1@ENSMUST00000103287, p1@uc009bpi.1, p1@uc009bpj.1 |
3.26e-53 | FFCP PHASE1:Mm9::chr6:41484803..41484826,+#_aa81a274d688877b02964924f7d1d45a | p1@ENSMUST00000103287, p1@uc009bpi.1, p1@uc009bpj.1 |
3.39e-52 | FFCP PHASE2:Mm9::chr9:44807434..44807445,-#_18efd7303b8ff2fd249ab88e2529c37b | p@chr9:44807434..44807445, - |
3.39e-52 | FFCP PHASE1:Mm9::chr9:44807434..44807445,-#_18efd7303b8ff2fd249ab88e2529c37b | p@chr9:44807434..44807445, - |
3.7e-52 | FFCP PHASE1:Mm9::chr6:41494001..41494028,+#_759f4bd995e7d7fe5277120a3cb6c955 | p@chr6:41494001..41494028, + |
3.7e-52 | FFCP PHASE2:Mm9::chr6:41494001..41494028,+#_759f4bd995e7d7fe5277120a3cb6c955 | p@chr6:41494001..41494028, + |
8.3e-52 | FFCP PHASE1:Mm9::chr2:11093788..11093799,+#_c7b10129a875aeb77e16e4d941e9fcb3 | p11@Prkcq |
8.3e-52 | FFCP PHASE2:Mm9::chr2:11093788..11093799,+#_c7b10129a875aeb77e16e4d941e9fcb3 | p11@Prkcq |
8.95e-52 | FFCP PHASE1:Mm9::chr9:44809185..44809215,-#_6e1726dc5d6e5d6abd80d9d850ca4006 | p@chr9:44809185..44809215, - |
8.95e-52 | FFCP PHASE2:Mm9::chr9:44809185..44809215,-#_6e1726dc5d6e5d6abd80d9d850ca4006 | p@chr9:44809185..44809215, - |
1.93e-51 | FFCP PHASE1:Mm9::chr14:54791784..54791787,+#_11265b55649ac47443b59fe8c6713f8e | p@chr14:54791784..54791787, + |
1.93e-51 | FFCP PHASE2:Mm9::chr14:54791784..54791787,+#_11265b55649ac47443b59fe8c6713f8e | p@chr14:54791784..54791787, + |
3.14e-51 | FFCP PHASE2:Mm9::chr6:40997465..40997489,+#_48eddf473bd6825794d1a0e1fa59e069 | p1@ENSMUST00000103263 |
3.14e-51 | FFCP PHASE1:Mm9::chr6:40997465..40997489,+#_48eddf473bd6825794d1a0e1fa59e069 | p1@ENSMUST00000103263 |
6.04e-51 | FFCP PHASE2:Mm9::chr9:44793518..44793537,+#_f7f324a9c82132b285ffa061b3b0fae5 | p@chr9:44793518..44793537, + |
6.04e-51 | FFCP PHASE1:Mm9::chr9:44793518..44793537,+#_f7f324a9c82132b285ffa061b3b0fae5 | p@chr9:44793518..44793537, + |
6.18e-51 | FFCP PHASE2:Mm9::chr10:28388454..28388458,+#_f5fb80251d800a5272331523f344dc1c | p5@Themis |
6.18e-51 | FFCP PHASE1:Mm9::chr10:28388454..28388458,+#_f5fb80251d800a5272331523f344dc1c | p5@Themis |
7.06e-51 | FFCP PHASE2:Mm9::chr6:41482920..41482933,+#_e51e030da76eca5ac5cddf9927e8fad8 | p5@uc009bpa.1 |
7.06e-51 | FFCP PHASE1:Mm9::chr6:41482920..41482933,+#_e51e030da76eca5ac5cddf9927e8fad8 | p5@uc009bpa.1 |
7.52e-51 | FFCP PHASE2:Mm9::chr6:41071548..41071565,+#_408c46c282b0d6b80ccce60e98b15b2f | p@chr6:41071548..41071565, + |
7.52e-51 | FFCP PHASE1:Mm9::chr6:41071548..41071565,+#_408c46c282b0d6b80ccce60e98b15b2f | +, p@chr6:41071548..41071565 |
1.56e-50 | FFCP PHASE2:Mm9::chr6:40997323..40997349,+#_21f81d16107905d27074f2b9d50d78ff | p2@uc009bnp.1, p2@uc012eki.1 |
1.56e-50 | FFCP PHASE1:Mm9::chr6:40997323..40997349,+#_21f81d16107905d27074f2b9d50d78ff | p2@uc009bnp.1, p2@uc012eki.1 |
8.48e-50 | FFCP PHASE1:Mm9::chr11:52095797..52095809,-#_c44e5d2b51538940984d6d0a25496991 | p5@Tcf7 |
8.48e-50 | FFCP PHASE2:Mm9::chr11:52095797..52095809,-#_c44e5d2b51538940984d6d0a25496991 | p5@Tcf7 |
2.7e-49 | FFCP PHASE1:Mm9::chr14:61328148..61328173,+#_39bf031cdd1fb91c484bcbda7f9b7741 | p@chr14:61328148..61328173, + |
2.7e-49 | FFCP PHASE2:Mm9::chr14:61328148..61328173,+#_39bf031cdd1fb91c484bcbda7f9b7741 | p@chr14:61328148..61328173, + |
4.69e-49 | FFCP PHASE1:Mm9::chr6:41483016..41483036,+#_b77f0179e46ff8c5141028037fb4e07e | p2@uc009bpa.1 |
4.69e-49 | FFCP PHASE2:Mm9::chr6:41483016..41483036,+#_b77f0179e46ff8c5141028037fb4e07e | p2@uc009bpa.1 |
5.29e-49 | FFCP PHASE1:Mm9::chrX:39855684..39855699,+#_6927434b0908a6ee766905b332821f23 | p2@Sh2d1a |
5.29e-49 | FFCP PHASE2:Mm9::chrX:39855684..39855699,+#_6927434b0908a6ee766905b332821f23 | p2@Sh2d1a |
6.55e-49 | FFCP PHASE2:Mm9::chr6:41128981..41128995,+#_9da35900742a31a2bff6a7915b0db52b | p1@uc012ekr.1 |
6.55e-49 | FFCP PHASE1:Mm9::chr6:41128981..41128995,+#_9da35900742a31a2bff6a7915b0db52b | p1@uc012ekr.1 |
8.0e-49 | FFCP PHASE2:Mm9::chr6:40841675..40841691,+#_3f53e9f298b45ade4dd161920a375ef1 | p2@1810009J06Rik |
8.0e-49 | FFCP PHASE1:Mm9::chr6:40841675..40841691,+#_3f53e9f298b45ade4dd161920a375ef1 | p2@1810009J06Rik |
1.12e-48 | FFCP PHASE1:Mm9::chr6:41066036..41066054,+#_ab5abc746789efa771f6e5a0c263a325 | p1@uc012ekk.1 |
1.12e-48 | FFCP PHASE2:Mm9::chr6:41066036..41066054,+#_ab5abc746789efa771f6e5a0c263a325 | p1@uc012ekk.1 |
1.27e-48 | FFCP PHASE1:Mm9::chr6:41009432..41009454,+#_fdedb34cd5f72a93b7e3e528d454675f | p1@ENSMUST00000103265 |
1.27e-48 | FFCP PHASE2:Mm9::chr6:41009432..41009454,+#_fdedb34cd5f72a93b7e3e528d454675f | p1@ENSMUST00000103265 |
1.27e-48 | FFCP PHASE2:Mm9::chr6:41491943..41491953,+#_fdedb34cd5f72a93b7e3e528d454675f | p3@uc009bpo.1, p3@uc009bpp.1 |
1.27e-48 | FFCP PHASE1:Mm9::chr6:41491943..41491953,+#_fdedb34cd5f72a93b7e3e528d454675f | p3@uc009bpo.1, p3@uc009bpp.1 |
2.25e-48 | FFCP PHASE2:Mm9::chr7:133512043..133512060,-#_2808e1f26efae3cb6fac2b2103c6088c | p@chr7:133512043..133512060, - |
2.25e-48 | FFCP PHASE1:Mm9::chr7:133512043..133512060,-#_2808e1f26efae3cb6fac2b2103c6088c | p@chr7:133512043..133512060, - |
3.02e-48 | FFCP PHASE1:Mm9::chr6:41128837..41128859,+#_3758c3433bb095111de1ee0fe9250216 | p2@Gm5409 |
3.02e-48 | FFCP PHASE2:Mm9::chr6:41128837..41128859,+#_3758c3433bb095111de1ee0fe9250216 | p2@Gm5409 |
3.92e-48 | FFCP PHASE1:Mm9::chr16:48772258..48772270,-#_6067b8630a3ad4cfb39050242233c50a | p5@Trat1 |
3.92e-48 | FFCP PHASE2:Mm9::chr16:48772258..48772270,-#_6067b8630a3ad4cfb39050242233c50a | p5@Trat1 |
4.8e-48 | FFCP PHASE2:Mm9::chr6:41489240..41489252,+#_c8c097b2e797f16f6cbaf677b32164b3 | p@chr6:41489240..41489252, + |
4.8e-48 | FFCP PHASE1:Mm9::chr6:41489240..41489252,+#_c8c097b2e797f16f6cbaf677b32164b3 | p@chr6:41489240..41489252, + |
5.53e-48 | FFCP PHASE1:Mm9::chr16:48772215..48772256,-#_44bc7f8e2ae27f0001fe0f03234d712d | p4@Trat1 |
5.53e-48 | FFCP PHASE2:Mm9::chr16:48772215..48772256,-#_44bc7f8e2ae27f0001fe0f03234d712d | p4@Trat1 |
7.84e-48 | FFCP PHASE2:Mm9::chr6:41231266..41231303,+#_f4b3a1cf828658ccc1caf1194e45f4d4 | p1@ENSMUST00000103282 |
7.84e-48 | FFCP PHASE1:Mm9::chr6:41494376..41494389,-#_f4b3a1cf828658ccc1caf1194e45f4d4 | p@chr6:41494376..41494389, - |
7.84e-48 | FFCP PHASE2:Mm9::chr6:41494376..41494389,-#_f4b3a1cf828658ccc1caf1194e45f4d4 | p@chr6:41494376..41494389, - |
7.84e-48 | FFCP PHASE1:Mm9::chr6:41231266..41231303,+#_f4b3a1cf828658ccc1caf1194e45f4d4 | p1@ENSMUST00000103282 |
8.51e-48 | FFCP PHASE2:Mm9::chr14:54794540..54794554,+#_eb3e27494570edbf46747b4ebe312150 | p@chr14:54794540..54794554, + |
8.51e-48 | FFCP PHASE1:Mm9::chr14:54794540..54794554,+#_eb3e27494570edbf46747b4ebe312150 | p@chr14:54794540..54794554, + |
9.15e-48 | FFCP PHASE2:Mm9::chr14:54496363..54496388,+#_ffb36df6b721a7f1f3f466cd092d750c | p@chr14:54496363..54496388, + |
9.15e-48 | FFCP PHASE1:Mm9::chr6:41491801..41491815,-#_ffb36df6b721a7f1f3f466cd092d750c | p@chr6:41491801..41491815, - |
9.15e-48 | FFCP PHASE2:Mm9::chr6:41491801..41491815,-#_ffb36df6b721a7f1f3f466cd092d750c | p@chr6:41491801..41491815, - |
9.15e-48 | FFCP PHASE1:Mm9::chr14:54496363..54496388,+#_ffb36df6b721a7f1f3f466cd092d750c | p@chr14:54496363..54496388, + |
1.12e-47 | FFCP PHASE1:Mm9::chr6:41484314..41484337,+#_5e75c5648f9cfaf8b9bc4e5889eb9652 | p1@ENSMUST00000103286, p1@uc009bpg.1, p1@uc009bph.1 |
1.12e-47 | FFCP PHASE2:Mm9::chr6:41484314..41484337,+#_5e75c5648f9cfaf8b9bc4e5889eb9652 | p1@ENSMUST00000103286, p1@uc009bpg.1, p1@uc009bph.1 |
1.14e-47 | FFCP PHASE2:Mm9::chr7:133512914..133512925,-#_113554b6854a5329924912782b9b109e | p7@Lat |
1.14e-47 | FFCP PHASE1:Mm9::chr7:133512914..133512925,-#_113554b6854a5329924912782b9b109e | p7@Lat |
1.19e-47 | FFCP PHASE2:Mm9::chr11:53448200..53448205,-#_56144a0bfb92d9e4870804a696dece2d | p1@Il13 |
1.19e-47 | FFCP PHASE1:Mm9::chr11:53448200..53448205,-#_56144a0bfb92d9e4870804a696dece2d | p1@Il13 |
1.22e-47 | FFCP PHASE1:Mm9::chr6:41138311..41138333,+#_0bc82459fb262abf2469c77364377734 | p@chr6:41138311..41138333, + |
1.22e-47 | FFCP PHASE2:Mm9::chr6:41138311..41138333,+#_0bc82459fb262abf2469c77364377734 | p@chr6:41138311..41138333, + |
1.42e-47 | FFCP PHASE2:Mm9::chr6:41493801..41493826,+#_d99f7af26d9a0c5bf80d4fcf89f18983 | p1@ENSMUST00000103298, p1@uc009bpy.1 |
1.42e-47 | FFCP PHASE1:Mm9::chr6:41493801..41493826,+#_d99f7af26d9a0c5bf80d4fcf89f18983 | p1@ENSMUST00000103298, p1@uc009bpy.1 |
1.49e-47 | FFCP PHASE1:Mm9::chr4:125978325..125978339,-#_0a802cd1389d808af7e5a94a5be398c9 | p@chr4:125978325..125978339, - |
1.49e-47 | FFCP PHASE2:Mm9::chr4:125978325..125978339,-#_0a802cd1389d808af7e5a94a5be398c9 | p@chr4:125978325..125978339, - |
1.49e-47 | FFCP PHASE1:Mm9::chr6:41483146..41483158,+#_0a802cd1389d808af7e5a94a5be398c9 | p6@uc009bpa.1 |
1.49e-47 | FFCP PHASE1:Mm9::chr7:133512935..133512936,-#_0a802cd1389d808af7e5a94a5be398c9 | p8@Lat |
1.49e-47 | FFCP PHASE2:Mm9::chr6:41483146..41483158,+#_0a802cd1389d808af7e5a94a5be398c9 | p6@uc009bpa.1 |
1.49e-47 | FFCP PHASE2:Mm9::chr7:133512935..133512936,-#_0a802cd1389d808af7e5a94a5be398c9 | p8@Lat |
1.52e-47 | FFCP PHASE2:Mm9::chr6:40996879..40996890,+#_c8fcb6c6b3fa4df9aae3a1972a80d46e | p5@uc009bnp.1, p5@uc012eki.1 |
1.52e-47 | FFCP PHASE1:Mm9::chr6:40996879..40996890,+#_c8fcb6c6b3fa4df9aae3a1972a80d46e | p5@uc009bnp.1, p5@uc012eki.1 |
1.6e-47 | FFCP PHASE1:Mm9::chr6:41492643..41492662,+#_1f27b30c87f148f4c3b6a8c143756d72 | p@chr6:41492643..41492662, + |
1.6e-47 | FFCP PHASE2:Mm9::chr6:41492643..41492662,+#_1f27b30c87f148f4c3b6a8c143756d72 | p@chr6:41492643..41492662, + |
1.9e-47 | FFCP PHASE2:Mm9::chr6:41492605..41492621,+#_9eed44d9ad8d66b99c33e54bec3d1764 | p@chr6:41492605..41492621, + |
1.9e-47 | FFCP PHASE1:Mm9::chr6:41492605..41492621,+#_9eed44d9ad8d66b99c33e54bec3d1764 | p@chr6:41492605..41492621, + |
1.49e-46 | FFCP PHASE1:Mm9::chr19:10904535..10904553,-#_d9ede8f053ec35dbbee23867683ba1cb | p2@Cd6 |
1.49e-46 | FFCP PHASE2:Mm9::chr19:10904535..10904553,-#_d9ede8f053ec35dbbee23867683ba1cb | p2@Cd6 |
1.59e-46 | FFCP PHASE2:Mm9::chr11:52075039..52075066,+#_5c17ebc8827aeb3893c6d24411a6eafd | p@chr11:52075039..52075066, + |
1.59e-46 | FFCP PHASE1:Mm9::chr11:52075039..52075066,+#_5c17ebc8827aeb3893c6d24411a6eafd | p@chr11:52075039..52075066, + |