UBERON:0000489
From FANTOM5_SSTAR
Name: | cavitated compound organ | ||
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Namespace: | FANTOM | ||
Definition: | "Compound organ that contains one or more macroscopic anatomical spaces." [CARO:MAH] | ||
Xrefs: |
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Alt_id: | UBERON:CARO_0000072-ZFA_0001490 | ||
Subset: |
organ_slim upper_level |
Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.
link to ontology dataset
data
Parents
is_a: | UBERON:0003103(compound organ) |
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Children
is a: | UBERON:0001255 (urinary bladder),UBERON:0002113 (kidney),UBERON:0002240 (spinal cord) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10011-101C2 (bladder, adult, pool1)
- 10017-101C8 (kidney, adult, pool1)
- 10045-101F9 (kidney, fetal, pool1)
- 10056-101H2 (spinal cord, fetal, donor1)
- 10088-102B7
- 10159-103A6 (spinal cord, adult, donor10252)
- 10181-103D1 (spinal cord - adult, donor10196)
- 10359-105E8 (spinal cord, newborn, donor10223)
- 10369-105F9 (spinal cord, adult, donor10258)
- 10411-106B6 (renal cell carcinoma cell line:OS-RC-2)
... further results Mouse (Mus musculus)
- 10011-101C2 (bladder, adult, pool1)
- 10017-101C8 (kidney, adult, pool1)
- 10045-101F9 (kidney, fetal, pool1)
- 10056-101H2 (spinal cord, fetal, donor1)
- 10088-102B7
- 10159-103A6 (spinal cord, adult, donor10252)
- 10181-103D1 (spinal cord - adult, donor10196)
- 10359-105E8 (spinal cord, newborn, donor10223)
- 10369-105F9 (spinal cord, adult, donor10258)
- 10411-106B6 (renal cell carcinoma cell line:OS-RC-2)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000489 (cavitated compound organ), sorted by p-values
Analyst: Hideya Kawaji
link to source dataset
human : data
mouse : data
P-value | FFCP | Short description |
---|---|---|
2.65e-72 | FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_deb6f0cdb25a51e4f6c816a919b7ebe9 | p4@PAX2 |
2.65e-72 | FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_deb6f0cdb25a51e4f6c816a919b7ebe9 | p4@PAX2 |
8.44e-61 | FFCP PHASE1:Hg19::chr10:102505954..102505973,+#_1f7a4622ff07f48edcf2895344aea486 | p3@PAX2 |
8.44e-61 | FFCP PHASE2:Hg19::chr10:102505954..102505973,+#_1f7a4622ff07f48edcf2895344aea486 | p3@PAX2 |
1.18e-58 | FFCP PHASE1:Hg19::chr2:693380..693398,+#_07b2ed43ad3f0be60cab7189b14ab044 | p@chr2:693380..693398, + |
1.18e-58 | FFCP PHASE2:Hg19::chr2:693380..693398,+#_07b2ed43ad3f0be60cab7189b14ab044 | p@chr2:693380..693398, + |
2.07e-58 | FFCP PHASE1:Mm9::chr6:52175944..52175955,-#_f359117c62b3f30f71ce0d2a7ff2f243 | p@chr6:52175944..52175955, - |
2.07e-58 | FFCP PHASE2:Mm9::chr6:52175944..52175955,-#_f359117c62b3f30f71ce0d2a7ff2f243 | p@chr6:52175944..52175955, - |
1.02e-55 | FFCP PHASE1:Hg19::chr10:102505327..102505344,+#_f3f0635e80ac49b276644966ae999f87 | p1@PAX2 |
1.02e-55 | FFCP PHASE2:Hg19::chr10:102505327..102505344,+#_f3f0635e80ac49b276644966ae999f87 | p1@PAX2 |
7.13e-55 | FFCP PHASE2:Hg19::chr7:27219833..27219845,-#_ca25a023378a280a37453635a68ef989 | p7@HOXA10 |
7.13e-55 | FFCP PHASE1:Hg19::chr7:27219833..27219845,-#_ca25a023378a280a37453635a68ef989 | p7@HOXA10 |
2.46e-53 | FFCP PHASE1:Hg19::chr10:102505493..102505546,+#_2d4f1f8ea76cd74aa1b4ad6cb392dbb0 | p2@PAX2 |
2.46e-53 | FFCP PHASE2:Hg19::chr10:102505493..102505546,+#_2d4f1f8ea76cd74aa1b4ad6cb392dbb0 | p2@PAX2 |
2.56e-53 | FFCP PHASE2:Mm9::chr2:74542680..74542705,+#_7a408da7c5f5c140c007a6e798e99178 | p6@Hoxd8 |
2.56e-53 | FFCP PHASE1:Mm9::chr2:74542680..74542705,+#_7a408da7c5f5c140c007a6e798e99178 | p6@Hoxd8 |
6.92e-53 | FFCP PHASE1:Hg19::chr9:133986782..133986794,+#_d56b99a476ed036f1a9eee65f744b6a4 | p4@AIF1L |
6.92e-53 | FFCP PHASE2:Hg19::chr9:133986782..133986794,+#_d56b99a476ed036f1a9eee65f744b6a4 | p4@AIF1L |
2.32e-52 | FFCP PHASE2:Hg19::chr1:81001398..81001426,+#_1fb25f136569d9e8c81b8e74ac23f659 | p1@ENST00000418041, p1@ENST00000443104 |
2.32e-52 | FFCP PHASE1:Hg19::chr1:81001398..81001426,+#_1fb25f136569d9e8c81b8e74ac23f659 | p1@ENST00000418041, p1@ENST00000443104 |
3.45e-51 | FFCP PHASE2:Hg19::chr15:66420804..66420837,-#_3a9a80c6d0dbaf617e3a669ee5a7ba52 | p4@MEGF11 |
3.45e-51 | FFCP PHASE1:Hg19::chr15:66420804..66420837,-#_3a9a80c6d0dbaf617e3a669ee5a7ba52 | p4@MEGF11 |
2.97e-49 | FFCP PHASE1:Mm9::chr2:74542589..74542602,+#_f043614321bc2588d3f7719a2042612c | p8@Hoxd8 |
2.97e-49 | FFCP PHASE2:Mm9::chr2:74542589..74542602,+#_f043614321bc2588d3f7719a2042612c | p8@Hoxd8 |
1.81e-48 | FFCP PHASE1:Mm9::chr11:96132523..96132538,+#_52abcbef38144afc678a52b57999f279 | p3@Hoxb9 |
1.81e-48 | FFCP PHASE2:Mm9::chr11:96132523..96132538,+#_52abcbef38144afc678a52b57999f279 | p3@Hoxb9 |
2.05e-48 | FFCP PHASE2:Mm9::chr19:44831390..44831414,+#_88f86ee6f576ae6840fac355f7f86d06 | p1@Pax2 |
2.05e-48 | FFCP PHASE1:Mm9::chr19:44831390..44831414,+#_88f86ee6f576ae6840fac355f7f86d06 | p1@Pax2 |
2.74e-46 | FFCP PHASE1:Hg19::chr9:119741711..119741743,-#_6915e889449bd78ebe4664fce9dcd959 | p@chr9:119741711..119741743, - |
2.74e-46 | FFCP PHASE2:Hg19::chr9:119741711..119741743,-#_6915e889449bd78ebe4664fce9dcd959 | p@chr9:119741711..119741743, - |
3.84e-46 | FFCP PHASE2:Hg19::chr18:3456189..3456200,+#_aff59a4cb35650473b04b97f37d9e169 | p@chr18:3456189..3456200, + |
3.84e-46 | FFCP PHASE1:Hg19::chr18:3456189..3456200,+#_aff59a4cb35650473b04b97f37d9e169 | p@chr18:3456189..3456200, + |
3.3e-45 | FFCP PHASE1:Mm9::chr19:44824107..44824111,-#_917cefaf6c33e311413add5ef86516a0 | p@chr19:44824107..44824111, - |
3.3e-45 | FFCP PHASE2:Mm9::chr19:44821192..44821202,+#_917cefaf6c33e311413add5ef86516a0 | p@chr19:44821192..44821202, + |
3.3e-45 | FFCP PHASE1:Mm9::chr19:44821192..44821202,+#_917cefaf6c33e311413add5ef86516a0 | p@chr19:44821192..44821202, + |
3.3e-45 | FFCP PHASE2:Mm9::chr19:44824107..44824111,-#_917cefaf6c33e311413add5ef86516a0 | p@chr19:44824107..44824111, - |
1.62e-43 | FFCP PHASE2:Mm9::chr2:24331116..24331125,-#_b93f19c51d6ca0070df09e3c326632f3 | p2@Pax8 |
1.62e-43 | FFCP PHASE1:Mm9::chr2:24331116..24331125,-#_b93f19c51d6ca0070df09e3c326632f3 | p2@Pax8 |
1.8e-42 | FFCP PHASE1:Mm9::chr11:96144050..96144065,+#_c79b5ced2b64ebbee7dbefb877dbde22 | p5@Hoxb8 |
1.8e-42 | FFCP PHASE2:Mm9::chr11:96144050..96144065,+#_c79b5ced2b64ebbee7dbefb877dbde22 | p5@Hoxb8 |
1.93e-42 | FFCP PHASE1:Hg19::chr7:7606139..7606151,-#_042efa1882e0172a146b3510e425ee8a | p@chr7:7606139..7606151, - |
1.93e-42 | FFCP PHASE2:Hg19::chr7:7606139..7606151,-#_042efa1882e0172a146b3510e425ee8a | p@chr7:7606139..7606151, - |
1.61e-41 | FFCP PHASE1:Mm9::chr10:3291561..3291580,+#_a3e5ed35eef59444dd349c49101a378f | p@chr10:3291561..3291580, + |
1.61e-41 | FFCP PHASE2:Mm9::chr10:3291561..3291580,+#_a3e5ed35eef59444dd349c49101a378f | p@chr10:3291561..3291580, + |
3.51e-41 | FFCP PHASE2:Mm9::chr19:44821149..44821161,+#_cc1c6e9acb693dafa03b2993dbde5123 | p@chr19:44821149..44821161, + |
3.51e-41 | FFCP PHASE1:Mm9::chr19:44821149..44821161,+#_cc1c6e9acb693dafa03b2993dbde5123 | p@chr19:44821149..44821161, + |
3.51e-41 | FFCP PHASE1:Mm9::chr19:44899724..44899728,+#_cc1c6e9acb693dafa03b2993dbde5123 | p@chr19:44899724..44899728, + |
3.51e-41 | FFCP PHASE2:Mm9::chr19:44899724..44899728,+#_cc1c6e9acb693dafa03b2993dbde5123 | p@chr19:44899724..44899728, + |
4.24e-41 | FFCP PHASE1:Hg19::chr2:177016336..177016350,+#_5bd73a03f412e8c0db51eb1ff399dd2c | p1@HOXD4 |
4.24e-41 | FFCP PHASE2:Hg19::chr2:177016336..177016350,+#_5bd73a03f412e8c0db51eb1ff399dd2c | p1@HOXD4 |
2.03e-40 | FFCP PHASE1:Hg19::chr10:102505552..102505563,+#_514090f6a09884624ec6a633f72b5eee | p5@PAX2 |
2.03e-40 | FFCP PHASE2:Hg19::chr10:102505552..102505563,+#_514090f6a09884624ec6a633f72b5eee | p5@PAX2 |
7.09e-40 | FFCP PHASE1:Mm9::chr11:96133231..96133247,+#_0f502b4f3f0ff449f6a8e08ec8695831 | p@chr11:96133231..96133247, + |
7.09e-40 | FFCP PHASE2:Mm9::chr11:96133231..96133247,+#_0f502b4f3f0ff449f6a8e08ec8695831 | p@chr11:96133231..96133247, + |
2.09e-39 | FFCP PHASE1:Mm9::chr8:107148422..107148433,+#_a0aa528590af62762c6d6a7ee2f29eb8 | p@chr8:107148422..107148433, + |
2.09e-39 | FFCP PHASE2:Mm9::chr8:107148422..107148433,+#_a0aa528590af62762c6d6a7ee2f29eb8 | p@chr8:107148422..107148433, + |
3.57e-39 | FFCP PHASE1:Hg19::chr14:57960456..57960478,-#_7012fbe89c42fbe9d0bdc33412218663 | p2@C14orf105 |
3.57e-39 | FFCP PHASE2:Hg19::chr14:57960456..57960478,-#_7012fbe89c42fbe9d0bdc33412218663 | p2@C14orf105 |
4.69e-39 | FFCP PHASE1:Mm9::chr2:74535796..74535808,+#_33f78349c1606afd43f151b9e44cbc64 | p3@Hoxd9 |
4.69e-39 | FFCP PHASE2:Mm9::chr2:74535796..74535808,+#_33f78349c1606afd43f151b9e44cbc64 | p3@Hoxd9 |
4.89e-39 | FFCP PHASE2:Hg19::chr10:102495136..102495146,+#_de5b5fa49ad7c9185fc9b8702408583f | p8@PAX2 |
4.89e-39 | FFCP PHASE1:Hg19::chr10:102495136..102495146,+#_de5b5fa49ad7c9185fc9b8702408583f | p8@PAX2 |
8.14e-39 | FFCP PHASE1:Hg19::chr1:1100457..1100470,+#_8a3e7fafc39c3664e1c4f0493168ed6a | p@chr1:1100457..1100470, + |
8.14e-39 | FFCP PHASE2:Hg19::chr1:1100457..1100470,+#_8a3e7fafc39c3664e1c4f0493168ed6a | p@chr1:1100457..1100470, + |
8.57e-39 | FFCP PHASE1:Mm9::chr16:88563264..88563271,-#_498b3dae34a45ac1de9198aafd9e00e7 | -, p@chr16:88563264..88563271 |
8.57e-39 | FFCP PHASE2:Mm9::chr16:88563264..88563271,-#_498b3dae34a45ac1de9198aafd9e00e7 | p@chr16:88563264..88563271, - |
1.08e-38 | FFCP PHASE2:Mm9::chr11:96146086..96146100,+#_d0a7c855a0581b69933e6c6c2399a684 | p@chr11:96146086..96146100, + |
1.08e-38 | FFCP PHASE1:Mm9::chr11:96146086..96146100,+#_d0a7c855a0581b69933e6c6c2399a684 | p@chr11:96146086..96146100, + |
2.14e-38 | FFCP PHASE1:Mm9::chr19:44821081..44821112,+#_8e471b2b14b04aa07267ef4c4c7c7683 | p@chr19:44821081..44821112, + |
2.14e-38 | FFCP PHASE2:Mm9::chr19:44821081..44821112,+#_8e471b2b14b04aa07267ef4c4c7c7683 | p@chr19:44821081..44821112, + |
2.33e-38 | FFCP PHASE1:Mm9::chr10:50689167..50689171,+#_9d99bf8f4cfbbe9d4ee329f583bf21fa | p@chr10:50689167..50689171, + |
2.33e-38 | FFCP PHASE2:Mm9::chr10:50689167..50689171,+#_9d99bf8f4cfbbe9d4ee329f583bf21fa | p@chr10:50689167..50689171, + |
2.75e-38 | FFCP PHASE1:Mm9::chr5:24755801..24755819,+#_ae25893f84400c12b5451f5b50868285 | p@chr5:24755801..24755819, + |
2.75e-38 | FFCP PHASE2:Mm9::chr5:24755801..24755819,+#_ae25893f84400c12b5451f5b50868285 | p@chr5:24755801..24755819, + |
3.25e-38 | FFCP PHASE2:Mm9::chr19:59532611..59532623,+#_7a67da7304bc5af0f1efcad1594a13e4 | p@chr19:59532611..59532623, + |
3.25e-38 | FFCP PHASE1:Mm9::chr19:59532611..59532623,+#_7a67da7304bc5af0f1efcad1594a13e4 | p@chr19:59532611..59532623, + |
3.83e-38 | FFCP PHASE1:Hg19::chr17:46692603..46692621,-#_41ab18e17234d30e606bcaf458603568 | p6@HOXB8 |
3.83e-38 | FFCP PHASE2:Hg19::chr17:46692603..46692621,-#_41ab18e17234d30e606bcaf458603568 | p6@HOXB8 |
9.63e-38 | FFCP PHASE2:Mm9::chr16:88563303..88563315,-#_545f5641efb758cec2e182ca5c9921b4 | p5@Cldn8 |
9.63e-38 | FFCP PHASE1:Mm9::chr16:88563303..88563315,-#_545f5641efb758cec2e182ca5c9921b4 | p5@Cldn8 |
1.84e-37 | FFCP PHASE2:Mm9::chr4:44956599..44956663,+#_32af7a50421600cde0e9be3ce6b8afbb | p1@ENSMUST00000154177 |
1.84e-37 | FFCP PHASE1:Mm9::chr4:44956599..44956663,+#_32af7a50421600cde0e9be3ce6b8afbb | p1@ENSMUST00000154177 |
2.14e-37 | FFCP PHASE1:Mm9::chr2:74517725..74517738,+#_6277aee94fd5fbf6ec5182327e192c85 | p5@Hoxd11 |
2.14e-37 | FFCP PHASE2:Mm9::chr2:74517725..74517738,+#_6277aee94fd5fbf6ec5182327e192c85 | p5@Hoxd11 |
3.16e-37 | FFCP PHASE1:Mm9::chr2:74560109..74560131,+#_4c43bafb04deaeea883b082707dd6bc3 | p1@Hoxd4 |
3.16e-37 | FFCP PHASE2:Mm9::chr2:74560109..74560131,+#_4c43bafb04deaeea883b082707dd6bc3 | p1@Hoxd4 |
3.58e-37 | FFCP PHASE1:Mm9::chr10:51915118..51915138,-#_7ea0b1fb235147dbfab1ea0f1a3abc86 | p4@Ros1 |
3.58e-37 | FFCP PHASE2:Mm9::chr10:39251651..39251690,+#_7ea0b1fb235147dbfab1ea0f1a3abc86 | p@chr10:39251651..39251690, + |
3.58e-37 | FFCP PHASE1:Mm9::chr8:118959620..118959632,-#_7ea0b1fb235147dbfab1ea0f1a3abc86 | p@chr8:118959620..118959632, - |
3.58e-37 | FFCP PHASE1:Mm9::chr7:31244771..31244782,+#_7ea0b1fb235147dbfab1ea0f1a3abc86 | p2@Nphs1 |
3.58e-37 | FFCP PHASE2:Mm9::chr19:17554168..17554181,+#_7ea0b1fb235147dbfab1ea0f1a3abc86 | p@chr19:17554168..17554181, + |
3.58e-37 | FFCP PHASE1:Mm9::chr2:74971765..74971779,-#_7ea0b1fb235147dbfab1ea0f1a3abc86 | p@chr2:74971765..74971779, - |
3.58e-37 | FFCP PHASE1:Mm9::chr10:39251651..39251690,+#_7ea0b1fb235147dbfab1ea0f1a3abc86 | p@chr10:39251651..39251690, + |
3.58e-37 | FFCP PHASE1:Mm9::chr5:5694436..5694447,-#_7ea0b1fb235147dbfab1ea0f1a3abc86 | p7@Steap2 |
3.58e-37 | FFCP PHASE2:Mm9::chr7:31244771..31244782,+#_7ea0b1fb235147dbfab1ea0f1a3abc86 | p2@Nphs1 |
3.58e-37 | FFCP PHASE1:Mm9::chr7:47891824..47891827,-#_7ea0b1fb235147dbfab1ea0f1a3abc86 | p@chr7:47891824..47891827, - |
3.58e-37 | FFCP PHASE2:Mm9::chr10:50622895..50622905,+#_7ea0b1fb235147dbfab1ea0f1a3abc86 | p@chr10:50622895..50622905, + |
3.58e-37 | FFCP PHASE2:Mm9::chr10:79277411..79277429,+#_7ea0b1fb235147dbfab1ea0f1a3abc86 | +, p@chr10:79277411..79277429 |
3.58e-37 | FFCP PHASE2:Mm9::chr1:89952042..89952053,+#_7ea0b1fb235147dbfab1ea0f1a3abc86 | p2@LOC100048662, p2@LOC100048744, p2@Ugt1a10 |
3.58e-37 | FFCP PHASE1:Mm9::chr19:17554168..17554181,+#_7ea0b1fb235147dbfab1ea0f1a3abc86 | +, p@chr19:17554168..17554181 |