UBERON:0000988
From FANTOM5_SSTAR
Name: | pons | ||
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Namespace: | FANTOM | ||
Definition: | "Brainstrem structure that has as its parts the pontine tegmentum and basal part of pons[FMA]." [FMA:67943, Wikipedia:Pons] | ||
Xrefs: |
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Synonyms: |
"pons of Varolius" EXACT [] "pons Varolii" EXACT [ncithesaurus:Pons_Varolii] | ||
Comments: | The pons is not present in zebrafish. In this ontology we currently have some structures which are applicable to zebrafish appearing as parts of the pons. Currently we only include the weaker dubious_for_taxon relationship ubtil this is resolved | ||
Alt_id: | UBERON:FBbt_00004840-FMA_67943-MA_0000204-MIAA_0000115-ZFA_0001618 | ||
Subset: | uberon_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0002680(regional part of metencephalon) |
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part_of: | UBERON:0001895(metencephalon),UBERON:0002298(brainstem) |
Children
derives from: | FF:0010033 (human pons - adult sample) |
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part of: | UBERON:0003023 (pontine tegmentum) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10033-101E6 (pons, adult, pool1)
- 10165-103B3 (locus coeruleus, adult, donor10252)
- 10182-103D2 (locus coeruleus - adult, donor10196)
- 10362-105F2 (locus coeruleus, newborn, donor10223)
- 10375-105G6 (locus coeruleus, adult, donor10258)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000988 (pons), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
P-value | FFCP | Short description |
---|---|---|
8.98e-131 | FFCP PHASE1:Hg19::chr2:218873244..218873256,-#_86580236641d115091767dbd4ff57d70 | p@chr2:218873244..218873256, - |
8.98e-131 | FFCP PHASE2:Hg19::chr6:56820018..56820029,+#_86580236641d115091767dbd4ff57d70 | p16@BEND6 |
8.98e-131 | FFCP PHASE1:Hg19::chr2:237146889..237146895,-#_86580236641d115091767dbd4ff57d70 | p@chr2:237146889..237146895, - |
8.98e-131 | FFCP PHASE2:Hg19::chr2:218873244..218873256,-#_86580236641d115091767dbd4ff57d70 | p@chr2:218873244..218873256, - |
8.98e-131 | FFCP PHASE2:Hg19::chr2:237146889..237146895,-#_86580236641d115091767dbd4ff57d70 | p@chr2:237146889..237146895, - |
8.98e-131 | FFCP PHASE1:Hg19::chr6:56820018..56820029,+#_86580236641d115091767dbd4ff57d70 | p16@BEND6 |
6.24e-88 | FFCP PHASE2:Hg19::chr7:31569075..31569083,+#_d2cffdd81d5f9d0d369f6ad076e1c752 | p3@CCDC129 |
6.24e-88 | FFCP PHASE1:Hg19::chr7:31569075..31569083,+#_d2cffdd81d5f9d0d369f6ad076e1c752 | p3@CCDC129 |
1.28e-84 | FFCP PHASE1:Hg19::chr4:117675601..117675614,+#_48ede2513dcffa91a6d0279694cfd881 | p@chr4:117675601..117675614, + |
1.28e-84 | FFCP PHASE2:Hg19::chr4:117675601..117675614,+#_48ede2513dcffa91a6d0279694cfd881 | p@chr4:117675601..117675614, + |
2.27e-84 | FFCP PHASE2:Hg19::chr11:30751827..30751838,+#_005711ed5758f0efc276687957aaca5a | p@chr11:30751827..30751838, + |
2.27e-84 | FFCP PHASE1:Hg19::chr11:30751827..30751838,+#_005711ed5758f0efc276687957aaca5a | p@chr11:30751827..30751838, + |
6.07e-75 | FFCP PHASE2:Hg19::chr18:5577640..5577652,-#_b00266e4e59a352a0a2054f5f2d6a322 | p14@EPB41L3 |
6.07e-75 | FFCP PHASE1:Hg19::chr18:5577640..5577652,-#_b00266e4e59a352a0a2054f5f2d6a322 | p14@EPB41L3 |
1.66e-74 | FFCP PHASE1:Hg19::chr3:183979132..183979143,-#_ea03f42e9cd6eaff5b0359cd274fcb64 | p8@CAMK2N2 |
1.66e-74 | FFCP PHASE2:Hg19::chr3:183979132..183979143,-#_ea03f42e9cd6eaff5b0359cd274fcb64 | p8@CAMK2N2 |
7.51e-74 | FFCP PHASE2:Hg19::chr6:55039307..55039326,+#_a9a9ea64615d4e898b7214e29c0c04ed | p1@HCRTR2 |
7.51e-74 | FFCP PHASE1:Hg19::chr6:55039307..55039326,+#_a9a9ea64615d4e898b7214e29c0c04ed | p1@HCRTR2 |
2.39e-66 | FFCP PHASE1:Hg19::chr16:47920709..47920716,-#_eb00bb794e6e9f2a74de8d1860d4a4b0 | p4@uc002eex.1 |
2.39e-66 | FFCP PHASE1:Hg19::chr5:126959900..126959932,+#_eb00bb794e6e9f2a74de8d1860d4a4b0 | p@chr5:126959900..126959932, + |
2.39e-66 | FFCP PHASE2:Hg19::chr16:49669972..49669983,-#_eb00bb794e6e9f2a74de8d1860d4a4b0 | p@chr16:49669972..49669983, - |
2.39e-66 | FFCP PHASE2:Hg19::chr16:67237164..67237171,+#_eb00bb794e6e9f2a74de8d1860d4a4b0 | p@chr16:67237164..67237171, + |
2.39e-66 | FFCP PHASE1:Hg19::chr6:71665623..71665630,-#_eb00bb794e6e9f2a74de8d1860d4a4b0 | p13@B3GAT2 |
2.39e-66 | FFCP PHASE2:Hg19::chr5:126959900..126959932,+#_eb00bb794e6e9f2a74de8d1860d4a4b0 | p@chr5:126959900..126959932, + |
2.39e-66 | FFCP PHASE1:Hg19::chr9:135458021..135458030,+#_eb00bb794e6e9f2a74de8d1860d4a4b0 | p6@BARHL1 |
2.39e-66 | FFCP PHASE2:Hg19::chr2:17381145..17381164,-#_eb00bb794e6e9f2a74de8d1860d4a4b0 | p@chr2:17381145..17381164, - |
2.39e-66 | FFCP PHASE1:Hg19::chr1:216692717..216692725,-#_eb00bb794e6e9f2a74de8d1860d4a4b0 | p@chr1:216692717..216692725, - |
2.39e-66 | FFCP PHASE1:Hg19::chr16:49669972..49669983,-#_eb00bb794e6e9f2a74de8d1860d4a4b0 | p@chr16:49669972..49669983, - |
2.39e-66 | FFCP PHASE1:Hg19::chr5:126959946..126959960,+#_eb00bb794e6e9f2a74de8d1860d4a4b0 | p@chr5:126959946..126959960, + |
2.39e-66 | FFCP PHASE2:Hg19::chr11:3253663..3253670,-#_eb00bb794e6e9f2a74de8d1860d4a4b0 | p4@MRGPRE |
2.39e-66 | FFCP PHASE1:Hg19::chr11:3253663..3253670,-#_eb00bb794e6e9f2a74de8d1860d4a4b0 | p4@MRGPRE |
2.39e-66 | FFCP PHASE2:Hg19::chr9:135458021..135458030,+#_eb00bb794e6e9f2a74de8d1860d4a4b0 | p6@BARHL1 |
2.39e-66 | FFCP PHASE2:Hg19::chr1:216692717..216692725,-#_eb00bb794e6e9f2a74de8d1860d4a4b0 | p@chr1:216692717..216692725, - |
2.39e-66 | FFCP PHASE2:Hg19::chr5:126959946..126959960,+#_eb00bb794e6e9f2a74de8d1860d4a4b0 | p@chr5:126959946..126959960, + |
2.39e-66 | FFCP PHASE2:Hg19::chr11:3224982..3224985,-#_eb00bb794e6e9f2a74de8d1860d4a4b0 | p@chr11:3224982..3224985, - |
2.39e-66 | FFCP PHASE1:Hg19::chr11:3224982..3224985,-#_eb00bb794e6e9f2a74de8d1860d4a4b0 | p@chr11:3224982..3224985, - |
2.39e-66 | FFCP PHASE1:Hg19::chr16:67237164..67237171,+#_eb00bb794e6e9f2a74de8d1860d4a4b0 | p@chr16:67237164..67237171, + |
2.39e-66 | FFCP PHASE1:Hg19::chr9:135458306..135458314,+#_eb00bb794e6e9f2a74de8d1860d4a4b0 | p9@BARHL1 |
2.39e-66 | FFCP PHASE1:Hg19::chr4:186661365..186661384,-#_eb00bb794e6e9f2a74de8d1860d4a4b0 | p46@SORBS2 |
2.39e-66 | FFCP PHASE2:Hg19::chr6:71665623..71665630,-#_eb00bb794e6e9f2a74de8d1860d4a4b0 | p13@B3GAT2 |
2.39e-66 | FFCP PHASE1:Hg19::chr2:17381145..17381164,-#_eb00bb794e6e9f2a74de8d1860d4a4b0 | p@chr2:17381145..17381164, - |
2.39e-66 | FFCP PHASE2:Hg19::chr9:135458306..135458314,+#_eb00bb794e6e9f2a74de8d1860d4a4b0 | p9@BARHL1 |
2.39e-66 | FFCP PHASE2:Hg19::chr4:186661365..186661384,-#_eb00bb794e6e9f2a74de8d1860d4a4b0 | p46@SORBS2 |
2.39e-66 | FFCP PHASE2:Hg19::chr16:47920709..47920716,-#_eb00bb794e6e9f2a74de8d1860d4a4b0 | p4@uc002eex.1 |
6.53e-66 | FFCP PHASE1:Hg19::chr16:49601912..49601949,-#_dc8db32ab6a0201962a5a397908d367c | p@chr16:49601912..49601949, - |
6.53e-66 | FFCP PHASE2:Hg19::chr16:49601912..49601949,-#_dc8db32ab6a0201962a5a397908d367c | p@chr16:49601912..49601949, - |
1.79e-65 | FFCP PHASE2:Hg19::chr13:70682590..70682601,-#_b0ea7c7d23f2321ce4c94620ee1b4e7b | p3@KLHL1 |
1.79e-65 | FFCP PHASE1:Hg19::chr13:70682590..70682601,-#_b0ea7c7d23f2321ce4c94620ee1b4e7b | p3@KLHL1 |
1.33e-60 | FFCP PHASE2:Hg19::chr12:72332618..72332632,+#_f4c3f5f6845f15154be78f44411a1d83 | p1@TPH2 |
1.33e-60 | FFCP PHASE1:Hg19::chr12:72332618..72332632,+#_f4c3f5f6845f15154be78f44411a1d83 | p1@TPH2 |
8.17e-60 | FFCP PHASE1:Hg19::chr8:24775490..24775500,+#_7f873cd8ae0e1e5ab8701166bf1600c0 | p@chr8:24775490..24775500, + |
8.17e-60 | FFCP PHASE2:Hg19::chr8:24775490..24775500,+#_7f873cd8ae0e1e5ab8701166bf1600c0 | p@chr8:24775490..24775500, + |
1.83e-59 | FFCP PHASE1:Hg19::chr1:155291376..155291428,+#_dbeab8735b8720b561a7181c56aeb002 | p6@RUSC1 |
1.83e-59 | FFCP PHASE2:Hg19::chr1:155291376..155291428,+#_dbeab8735b8720b561a7181c56aeb002 | p6@RUSC1 |
1.51e-54 | FFCP PHASE1:Hg19::chr2:25720514..25720525,-#_06224900d863b248c6683509d4e11afc | p16@DTNB |
1.51e-54 | FFCP PHASE2:Hg19::chr2:25720514..25720525,-#_06224900d863b248c6683509d4e11afc | p16@DTNB |
1.12e-53 | FFCP PHASE2:Hg19::chr14:105833352..105833361,+#_725b055c45315eb5c1131428e7bcfe94 | p@chr14:105833352..105833361, + |
1.12e-53 | FFCP PHASE1:Hg19::chr14:105833352..105833361,+#_725b055c45315eb5c1131428e7bcfe94 | p@chr14:105833352..105833361, + |
1.68e-53 | FFCP PHASE1:Hg19::chr7:4877677..4877693,-#_a05b4f0230225a33a4b43a2e1b1440d9 | p5@RADIL |
1.68e-53 | FFCP PHASE2:Hg19::chr7:4877677..4877693,-#_a05b4f0230225a33a4b43a2e1b1440d9 | p5@RADIL |
2.19e-53 | FFCP PHASE2:Hg19::chr11:75379595..75379606,-#_c2042bcec4bce25181de6bd59cac97cd | p17@MAP6 |
2.19e-53 | FFCP PHASE1:Hg19::chr11:75379595..75379606,-#_c2042bcec4bce25181de6bd59cac97cd | p17@MAP6 |
2.87e-53 | FFCP PHASE2:Hg19::chr7:149480688..149480699,+#_8dd0b40674311f207a7b4e544b00cd60 | p@chr7:149480688..149480699, + |
2.87e-53 | FFCP PHASE1:Hg19::chr7:149480688..149480699,+#_8dd0b40674311f207a7b4e544b00cd60 | p@chr7:149480688..149480699, + |
3.75e-53 | FFCP PHASE2:Hg19::chrX:20075103..20075114,-#_f1ae82d3887fb897931ae30d1df12762 | p20@MAP7D2 |
3.75e-53 | FFCP PHASE1:Hg19::chrX:20075103..20075114,-#_f1ae82d3887fb897931ae30d1df12762 | p20@MAP7D2 |
6.39e-53 | FFCP PHASE2:Hg19::chr2:108602711..108602722,+#_78feb3f41eafedbe4c21a2f2baebd797 | p3@SLC5A7 |
6.39e-53 | FFCP PHASE1:Hg19::chr2:108602711..108602722,+#_78feb3f41eafedbe4c21a2f2baebd797 | p3@SLC5A7 |
1.14e-50 | FFCP PHASE1:Hg19::chr2:72381655..72381673,-#_83a296a6eb32a5b1b6e1c92023081982 | p@chr2:72381655..72381673, - |
1.14e-50 | FFCP PHASE2:Hg19::chr2:72381655..72381673,-#_83a296a6eb32a5b1b6e1c92023081982 | p@chr2:72381655..72381673, - |
1.59e-50 | FFCP PHASE2:Hg19::chrX:16753203..16753238,+#_5389a0c72ac0bd702dbb346716168d40 | p@chrX:16753203..16753238, + |
1.59e-50 | FFCP PHASE1:Hg19::chrX:16753203..16753238,+#_5389a0c72ac0bd702dbb346716168d40 | p@chrX:16753203..16753238, + |
4.38e-50 | FFCP PHASE1:Hg19::chr8:24775962..24775972,+#_9198372aa2b8315ba006babcc6bca7a8 | p@chr8:24775962..24775972, + |
4.38e-50 | FFCP PHASE2:Hg19::chr8:24775962..24775972,+#_9198372aa2b8315ba006babcc6bca7a8 | p@chr8:24775962..24775972, + |
1.2e-49 | FFCP PHASE2:Hg19::chr16:290098..290109,+#_9682ad85d76ab70e374097c99d5aa932 | p13@ITFG3 |
1.2e-49 | FFCP PHASE1:Hg19::chr16:290098..290109,+#_9682ad85d76ab70e374097c99d5aa932 | p13@ITFG3 |
2.62e-46 | FFCP PHASE2:Hg19::chr8:24775348..24775355,+#_4b899c2917a5cf207dab25b59bf88c9c | p@chr8:24775348..24775355, + |
2.62e-46 | FFCP PHASE1:Hg19::chr8:24775348..24775355,+#_4b899c2917a5cf207dab25b59bf88c9c | p@chr8:24775348..24775355, + |
4.17e-46 | FFCP PHASE2:Hg19::chr15:79356984..79356998,-#_5627c0a43934a0365c1933cf9637e4c7 | p8@RASGRF1 |
4.17e-46 | FFCP PHASE1:Hg19::chr15:79356984..79356998,-#_5627c0a43934a0365c1933cf9637e4c7 | p8@RASGRF1 |
7.74e-46 | FFCP PHASE2:Hg19::chr18:72202828..72202832,+#_f44eae2433648ce8e29ba5d89b015c30 | p@chr18:72202828..72202832, + |
7.74e-46 | FFCP PHASE1:Hg19::chr18:72202828..72202832,+#_f44eae2433648ce8e29ba5d89b015c30 | p@chr18:72202828..72202832, + |
9.03e-46 | FFCP PHASE1:Hg19::chr9:116298778..116298788,+#_e17fe7adf167dc54dcae7ae2b48b4494 | p31@RGS3 |
9.03e-46 | FFCP PHASE2:Hg19::chr9:116298778..116298788,+#_e17fe7adf167dc54dcae7ae2b48b4494 | p31@RGS3 |
9.03e-46 | FFCP PHASE1:Hg19::chr4:115519490..115519496,+#_e17fe7adf167dc54dcae7ae2b48b4494 | p11@UGT8 |
9.03e-46 | FFCP PHASE2:Hg19::chr4:115519490..115519496,+#_e17fe7adf167dc54dcae7ae2b48b4494 | p11@UGT8 |
5.0e-45 | FFCP PHASE1:Hg19::chr7:31569365..31569379,+#_1779a3ba82d0ce0c6a9ed2203b008cc2 | p1@CCDC129 |
5.0e-45 | FFCP PHASE2:Hg19::chr7:31569365..31569379,+#_1779a3ba82d0ce0c6a9ed2203b008cc2 | p1@CCDC129 |
9.77e-45 | FFCP PHASE1:Hg19::chr22:37608711..37608730,-#_ac15d7a69f7ff881f49092e381e50bac | p8@SSTR3 |
9.77e-45 | FFCP PHASE2:Hg19::chr22:37608711..37608730,-#_ac15d7a69f7ff881f49092e381e50bac | p8@SSTR3 |
1.22e-44 | FFCP PHASE1:Hg19::chr17:7559346..7559354,+#_5428b939e9a0cb1df4d5f262e44e903e | p@chr17:7559346..7559354, + |
1.22e-44 | FFCP PHASE2:Hg19::chr17:7559346..7559354,+#_5428b939e9a0cb1df4d5f262e44e903e | p@chr17:7559346..7559354, + |
1.53e-44 | FFCP PHASE2:Hg19::chr12:56881851..56881862,-#_322bb51918822741d961a53c7d3d7a6a | p7@GLS2 |
1.53e-44 | FFCP PHASE1:Hg19::chr12:56881851..56881862,-#_322bb51918822741d961a53c7d3d7a6a | p7@GLS2 |
1.91e-44 | FFCP PHASE1:Hg19::chr9:112404786..112404791,+#_84c6de93cd8c0a4342bf63e894fd24bc | p@chr9:112404786..112404791, + |
1.91e-44 | FFCP PHASE2:Hg19::chr9:112404786..112404791,+#_84c6de93cd8c0a4342bf63e894fd24bc | p@chr9:112404786..112404791, + |
2.38e-44 | FFCP PHASE1:Hg19::chr2:25720324..25720333,-#_96cdbb70b11aff088ec797df4bf5bb51 | p15@DTNB |
2.38e-44 | FFCP PHASE2:Hg19::chr2:25720324..25720333,-#_96cdbb70b11aff088ec797df4bf5bb51 | p15@DTNB |
2.97e-44 | FFCP PHASE2:Hg19::chr11:27742115..27742119,-#_6b40ede0776143150ab00581f4650364 | p17@BDNF |
2.97e-44 | FFCP PHASE1:Hg19::chr11:27742115..27742119,-#_6b40ede0776143150ab00581f4650364 | p17@BDNF |