UBERON:0001280
From FANTOM5_SSTAR
Name: | liver parenchyma | ||
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Namespace: | FANTOM | ||
Definition: | "the functional units of the liver including the lobules." [MP:0008986] | ||
Xrefs: |
| ||
Synonyms: |
"hepatic parenchyma" EXACT [FMA:17540] "hepatic parenchyme" RELATED [VHOG:0000539] "liver parenchyme" EXACT [XAO:0000454] "parenchyma of liver" EXACT [FMA:17540] | ||
Comments: | This class was created automatically from a combination of ontologies | ||
Alt_id: |
UBERON:0003223 UBERON:FMA_17540-MA_0000366 |
Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.
link to ontology dataset
data
Parents
is_a: | UBERON:0000353(parenchyma),UBERON:0004119(endoderm-derived structure) |
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develops_from: | UBERON:0005171(hepatic duct),UBERON:0008835(hepatic diverticulum) |
part_of: | UBERON:0002107(liver) |
Children
part of: | UBERON:0001171 (portal lobule),UBERON:0004647 (liver lobule) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10536-107G5 (cholangiocellular carcinoma cell line:HuH-28)
- 10629-108H8
- 10630-108H9
- 11521-119H9 (Hepatic Sinusoidal Endothelial Cells, donor1)
- 11601-120H8 (Hepatic Sinusoidal Endothelial Cells, donor2)
- 11682-122H8 (Hepatic Sinusoidal Endothelial Cells, donor3)
- 11830-124G3 (Mouse hepatic Sinusoidal Endothelial Cells, donor1)
- 11831-124G4
- 11832-124G5
- 13595-146E4 (liver sinusoidal endothelial cells, sham operation, biol_rep1)
... further results Mouse (Mus musculus)
- 10536-107G5 (cholangiocellular carcinoma cell line:HuH-28)
- 10629-108H8
- 10630-108H9
- 11521-119H9 (Hepatic Sinusoidal Endothelial Cells, donor1)
- 11601-120H8 (Hepatic Sinusoidal Endothelial Cells, donor2)
- 11682-122H8 (Hepatic Sinusoidal Endothelial Cells, donor3)
- 11830-124G3 (Mouse hepatic Sinusoidal Endothelial Cells, donor1)
- 11831-124G4
- 11832-124G5
- 13595-146E4 (liver sinusoidal endothelial cells, sham operation, biol_rep1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001280 (liver parenchyma), sorted by p-values
Analyst: Hideya Kawaji
link to source dataset
human : data
mouse : data
P-value | FFCP | Short description |
---|---|---|
9.74e-88 | FFCP PHASE1:Hg19::chr7:158330204..158330217,+#_574b56c06426d590943c5cb24575133d | p2@ENST00000448698 |
9.74e-88 | FFCP PHASE2:Hg19::chr7:158330204..158330217,+#_574b56c06426d590943c5cb24575133d | p2@ENST00000448698 |
3.07e-86 | FFCP PHASE1:Mm9::chr9:116223548..116223551,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr9:116223548..116223551, + |
3.07e-86 | FFCP PHASE1:Mm9::chr17:48822294..48822295,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr17:48822294..48822295, - |
3.07e-86 | FFCP PHASE1:Mm9::chr4:137487112..137487117,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr4:137487112..137487117, + |
3.07e-86 | FFCP PHASE1:Mm9::chr5:75375903..75375931,+#_103e79e5a3c1e504c4a5bd9b992197fa | +, p@chr5:75375903..75375931 |
3.07e-86 | FFCP PHASE2:Mm9::chr3:9705000..9705004,-#_103e79e5a3c1e504c4a5bd9b992197fa | p4@Pag1 |
3.07e-86 | FFCP PHASE1:Mm9::chr17:34798555..34798562,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr17:34798555..34798562, + |
3.07e-86 | FFCP PHASE1:Mm9::chr9:42915220..42915225,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr9:42915220..42915225, - |
3.07e-86 | FFCP PHASE2:Mm9::chr16:85547242..85547252,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr16:85547242..85547252, + |
3.07e-86 | FFCP PHASE1:Mm9::chr6:48398664..48398684,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr6:48398664..48398684, - |
3.07e-86 | FFCP PHASE2:Mm9::chr11:115280630..115280662,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr11:115280630..115280662, + |
3.07e-86 | FFCP PHASE2:Mm9::chr5:114422970..114422985,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr5:114422970..114422985, - |
3.07e-86 | FFCP PHASE2:Mm9::chr6:91441074..91441080,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr6:91441074..91441080, - |
3.07e-86 | FFCP PHASE1:Mm9::chr6:51831254..51831256,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr6:51831254..51831256, - |
3.07e-86 | FFCP PHASE1:Mm9::chr10:85585991..85586025,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr10:85585991..85586025, - |
3.07e-86 | FFCP PHASE1:Mm9::chr2:84756280..84756286,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr2:84756280..84756286, + |
3.07e-86 | FFCP PHASE2:Mm9::chr6:48398664..48398684,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr6:48398664..48398684, - |
3.07e-86 | FFCP PHASE2:Mm9::chr17:34798555..34798562,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr17:34798555..34798562, + |
3.07e-86 | FFCP PHASE1:Mm9::chr8:87745380..87745385,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr8:87745380..87745385, + |
3.07e-86 | FFCP PHASE1:Mm9::chr13:113543694..113543702,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr13:113543694..113543702, - |
3.07e-86 | FFCP PHASE2:Mm9::chr1:163794592..163794593,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr1:163794592..163794593, + |
3.07e-86 | FFCP PHASE2:Mm9::chr13:96429295..96429302,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr13:96429295..96429302, - |
3.07e-86 | FFCP PHASE2:Mm9::chr1:132405466..132405470,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr1:132405466..132405470, + |
3.07e-86 | FFCP PHASE2:Mm9::chr17:24807620..24807650,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr17:24807620..24807650, - |
3.07e-86 | FFCP PHASE2:Mm9::chr11:109223779..109223789,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr11:109223779..109223789, - |
3.07e-86 | FFCP PHASE1:Mm9::chr18:39513150..39513152,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr18:39513150..39513152, + |
3.07e-86 | FFCP PHASE1:Mm9::chr7:117101788..117101793,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr7:117101788..117101793, + |
3.07e-86 | FFCP PHASE1:Mm9::chr8:3311867..3311873,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr8:3311867..3311873, + |
3.07e-86 | FFCP PHASE1:Mm9::chr15:82209805..82209851,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr15:82209805..82209851, + |
3.07e-86 | FFCP PHASE2:Mm9::chr17:35093764..35093773,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr17:35093764..35093773, - |
3.07e-86 | FFCP PHASE2:Mm9::chr11:88890706..88890745,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr11:88890706..88890745, + |
3.07e-86 | FFCP PHASE2:Mm9::chr15:88669906..88669914,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr15:88669906..88669914, + |
3.07e-86 | FFCP PHASE1:Mm9::chr12:25364645..25364655,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr12:25364645..25364655, + |
3.07e-86 | FFCP PHASE1:Mm9::chr6:92938260..92938264,-#_103e79e5a3c1e504c4a5bd9b992197fa | -, p@chr6:92938260..92938264 |
3.07e-86 | FFCP PHASE1:Mm9::chr12:85288471..85288502,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr12:85288471..85288502, + |
3.07e-86 | FFCP PHASE2:Mm9::chr11:54785454..54785456,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr11:54785454..54785456, - |
3.07e-86 | FFCP PHASE1:Mm9::chr17:35094068..35094092,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr17:35094068..35094092, - |
3.07e-86 | FFCP PHASE1:Mm9::chr1:66883923..66883955,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr1:66883923..66883955, - |
3.07e-86 | FFCP PHASE1:Mm9::chr11:54785454..54785456,-#_103e79e5a3c1e504c4a5bd9b992197fa | -, p@chr11:54785454..54785456 |
3.07e-86 | FFCP PHASE1:Mm9::chr10:8586393..8586401,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr10:8586393..8586401, + |
3.07e-86 | FFCP PHASE1:Mm9::chr13:96429295..96429302,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr13:96429295..96429302, - |
3.07e-86 | FFCP PHASE1:Mm9::chr9:62199266..62199267,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr9:62199266..62199267, + |
3.07e-86 | FFCP PHASE1:Mm9::chr4:126939557..126939562,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr4:126939557..126939562, + |
3.07e-86 | FFCP PHASE1:Mm9::chr8:111108947..111108951,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr8:111108947..111108951, + |
3.07e-86 | FFCP PHASE1:Mm9::chr3:104857794..104857802,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr3:104857794..104857802, - |
3.07e-86 | FFCP PHASE2:Mm9::chr4:141645056..141645068,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr4:141645056..141645068, + |
3.07e-86 | FFCP PHASE2:Mm9::chr15:59435855..59435878,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr15:59435855..59435878, - |
3.07e-86 | FFCP PHASE1:Mm9::chr2:169549462..169549477,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr2:169549462..169549477, + |
3.07e-86 | FFCP PHASE1:Mm9::chr2:133323630..133323631,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr2:133323630..133323631, + |
3.07e-86 | FFCP PHASE2:Mm9::chr1:138241693..138241697,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr1:138241693..138241697, + |
3.07e-86 | FFCP PHASE2:Mm9::chr5:76329688..76329692,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr5:76329688..76329692, - |
3.07e-86 | FFCP PHASE1:Mm9::chr5:114422970..114422985,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr5:114422970..114422985, - |
3.07e-86 | FFCP PHASE2:Mm9::chr18:5125608..5125613,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr18:5125608..5125613, + |
3.07e-86 | FFCP PHASE1:Mm9::chr1:186559285..186559288,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr1:186559285..186559288, + |
3.07e-86 | FFCP PHASE1:Mm9::chr12:86691503..86691504,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr12:86691503..86691504, - |
3.07e-86 | FFCP PHASE2:Mm9::chr17:12388232..12388237,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr17:12388232..12388237, + |
3.07e-86 | FFCP PHASE1:Mm9::chr18:44793802..44793835,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr18:44793802..44793835, + |
3.07e-86 | FFCP PHASE1:Mm9::chr10:60279719..60279737,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr10:60279719..60279737, - |
3.07e-86 | FFCP PHASE1:Mm9::chr7:118133901..118133904,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr7:118133901..118133904, - |
3.07e-86 | FFCP PHASE2:Mm9::chr12:88237840..88237851,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr12:88237840..88237851, - |
3.07e-86 | FFCP PHASE2:Mm9::chr10:21389022..21389032,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr10:21389022..21389032, + |
3.07e-86 | FFCP PHASE2:Mm9::chr17:35096519..35096524,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr17:35096519..35096524, + |
3.07e-86 | FFCP PHASE2:Mm9::chr5:32912678..32912687,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr5:32912678..32912687, + |
3.07e-86 | FFCP PHASE2:Mm9::chr14:15179132..15179141,+#_103e79e5a3c1e504c4a5bd9b992197fa | p8@Il3ra |
3.07e-86 | FFCP PHASE1:Mm9::chr4:141645056..141645068,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr4:141645056..141645068, + |
3.07e-86 | FFCP PHASE2:Mm9::chr4:86335502..86335509,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr4:86335502..86335509, + |
3.07e-86 | FFCP PHASE2:Mm9::chr7:117101788..117101793,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr7:117101788..117101793, + |
3.07e-86 | FFCP PHASE1:Mm9::chr13:113053257..113053258,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr13:113053257..113053258, + |
3.07e-86 | FFCP PHASE1:Mm9::chr17:28107053..28107062,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr17:28107053..28107062, - |
3.07e-86 | FFCP PHASE2:Mm9::chr10:85586219..85586227,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr10:85586219..85586227, + |
3.07e-86 | FFCP PHASE2:Mm9::chr11:68437375..68437378,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr11:68437375..68437378, + |
3.07e-86 | FFCP PHASE1:Mm9::chr17:35106749..35106752,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr17:35106749..35106752, - |
3.07e-86 | FFCP PHASE2:Mm9::chr15:32178407..32178408,-#_103e79e5a3c1e504c4a5bd9b992197fa | -, p@chr15:32178407..32178408 |
3.07e-86 | FFCP PHASE2:Mm9::chr2:11935531..11935538,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr2:11935531..11935538, - |
3.07e-86 | FFCP PHASE2:Mm9::chr17:35093377..35093381,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr17:35093377..35093381, + |
3.07e-86 | FFCP PHASE1:Mm9::chr18:65159026..65159034,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr18:65159026..65159034, - |
3.07e-86 | FFCP PHASE1:Mm9::chr6:91441074..91441080,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr6:91441074..91441080, - |
3.07e-86 | FFCP PHASE1:Mm9::chr5:76329688..76329692,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr5:76329688..76329692, - |
3.07e-86 | FFCP PHASE1:Mm9::chr1:173044327..173044331,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr1:173044327..173044331, + |
3.07e-86 | FFCP PHASE1:Mm9::chr11:48685851..48685860,-#_103e79e5a3c1e504c4a5bd9b992197fa | -, p@chr11:48685851..48685860 |
3.07e-86 | FFCP PHASE2:Mm9::chr1:173044327..173044331,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr1:173044327..173044331, + |
3.07e-86 | FFCP PHASE2:Mm9::chr8:3311867..3311873,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr8:3311867..3311873, + |
3.07e-86 | FFCP PHASE1:Mm9::chr7:109031260..109031268,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr7:109031260..109031268, + |
3.07e-86 | FFCP PHASE1:Mm9::chr17:34798597..34798606,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr17:34798597..34798606, + |
3.07e-86 | FFCP PHASE1:Mm9::chr9:45920408..45920437,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr9:45920408..45920437, - |
3.07e-86 | FFCP PHASE2:Mm9::chr8:111108947..111108951,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr8:111108947..111108951, + |
3.07e-86 | FFCP PHASE1:Mm9::chr17:12388232..12388237,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr17:12388232..12388237, + |
3.07e-86 | FFCP PHASE2:Mm9::chr15:90508949..90508955,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr15:90508949..90508955, - |
3.07e-86 | FFCP PHASE1:Mm9::chr10:85586219..85586227,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr10:85586219..85586227, + |
3.07e-86 | FFCP PHASE1:Mm9::chr19:29573929..29573932,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr19:29573929..29573932, + |
3.07e-86 | FFCP PHASE2:Mm9::chr17:34798597..34798606,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr17:34798597..34798606, + |
3.07e-86 | FFCP PHASE1:Mm9::chr16:11009028..11009039,+#_103e79e5a3c1e504c4a5bd9b992197fa | p4@Gm4262 |
3.07e-86 | FFCP PHASE1:Mm9::chr13:113550715..113550722,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr13:113550715..113550722, - |
3.07e-86 | FFCP PHASE2:Mm9::chr8:114250006..114250039,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr8:114250006..114250039, - |
3.07e-86 | FFCP PHASE2:Mm9::chr16:85801525..85801529,-#_103e79e5a3c1e504c4a5bd9b992197fa | p6@Adamts1 |
3.07e-86 | FFCP PHASE2:Mm9::chr13:96429602..96429605,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr13:96429602..96429605, - |
3.07e-86 | FFCP PHASE1:Mm9::chr13:5840965..5840966,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr13:5840965..5840966, + |
3.07e-86 | FFCP PHASE2:Mm9::chr6:129180613..129180616,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr6:129180613..129180616, + |
3.07e-86 | FFCP PHASE2:Mm9::chr4:43407825..43407830,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr4:43407825..43407830, + |