UBERON:0001280
From FANTOM5_SSTAR
Name: | liver parenchyma | ||
---|---|---|---|
Namespace: | FANTOM | ||
Definition: | "the functional units of the liver including the lobules." [MP:0008986] | ||
Xrefs: |
| ||
Synonyms: |
"hepatic parenchyma" EXACT [FMA:17540] "hepatic parenchyme" RELATED [VHOG:0000539] "liver parenchyme" EXACT [XAO:0000454] "parenchyma of liver" EXACT [FMA:17540] | ||
Comments: | This class was created automatically from a combination of ontologies | ||
Alt_id: |
UBERON:0003223 UBERON:FMA_17540-MA_0000366 |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000353(parenchyma),UBERON:0004119(endoderm-derived structure) |
---|---|
develops_from: | UBERON:0005171(hepatic duct),UBERON:0008835(hepatic diverticulum) |
part_of: | UBERON:0002107(liver) |
Children
part of: | UBERON:0001171 (portal lobule),UBERON:0004647 (liver lobule) |
---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10536-107G5 (cholangiocellular carcinoma cell line:HuH-28)
- 10629-108H8
- 10630-108H9
- 11521-119H9 (Hepatic Sinusoidal Endothelial Cells, donor1)
- 11601-120H8 (Hepatic Sinusoidal Endothelial Cells, donor2)
- 11682-122H8 (Hepatic Sinusoidal Endothelial Cells, donor3)
- 11830-124G3 (Mouse hepatic Sinusoidal Endothelial Cells, donor1)
- 11831-124G4
- 11832-124G5
- 13595-146E4 (liver sinusoidal endothelial cells, sham operation, biol_rep1)
... further results Mouse (Mus musculus)
- 10536-107G5 (cholangiocellular carcinoma cell line:HuH-28)
- 10629-108H8
- 10630-108H9
- 11521-119H9 (Hepatic Sinusoidal Endothelial Cells, donor1)
- 11601-120H8 (Hepatic Sinusoidal Endothelial Cells, donor2)
- 11682-122H8 (Hepatic Sinusoidal Endothelial Cells, donor3)
- 11830-124G3 (Mouse hepatic Sinusoidal Endothelial Cells, donor1)
- 11831-124G4
- 11832-124G5
- 13595-146E4 (liver sinusoidal endothelial cells, sham operation, biol_rep1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001280 (liver parenchyma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
P-value | FFCP | Short description |
---|---|---|
9.74e-88 | FFCP PHASE2:Hg19::chr7:158330204..158330217,+#_574b56c06426d590943c5cb24575133d | p2@ENST00000448698 |
9.74e-88 | FFCP PHASE1:Hg19::chr7:158330204..158330217,+#_574b56c06426d590943c5cb24575133d | p2@ENST00000448698 |
3.07e-86 | FFCP PHASE2:Mm9::chr1:66883923..66883955,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr1:66883923..66883955, - |
3.07e-86 | FFCP PHASE2:Mm9::chr13:100000226..100000230,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr13:100000226..100000230, + |
3.07e-86 | FFCP PHASE1:Mm9::chr9:62199266..62199267,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr9:62199266..62199267, + |
3.07e-86 | FFCP PHASE1:Mm9::chr13:5840965..5840966,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr13:5840965..5840966, + |
3.07e-86 | FFCP PHASE1:Mm9::chr5:33088768..33088773,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr5:33088768..33088773, + |
3.07e-86 | FFCP PHASE2:Mm9::chr16:85801525..85801529,-#_103e79e5a3c1e504c4a5bd9b992197fa | p6@Adamts1 |
3.07e-86 | FFCP PHASE1:Mm9::chr18:44793802..44793835,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr18:44793802..44793835, + |
3.07e-86 | FFCP PHASE2:Mm9::chr15:82193340..82193343,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr15:82193340..82193343, + |
3.07e-86 | FFCP PHASE2:Mm9::chr9:42915220..42915225,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr9:42915220..42915225, - |
3.07e-86 | FFCP PHASE1:Mm9::chr9:42915220..42915225,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr9:42915220..42915225, - |
3.07e-86 | FFCP PHASE1:Mm9::chr6:92938260..92938264,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr6:92938260..92938264, - |
3.07e-86 | FFCP PHASE1:Mm9::chr9:45920408..45920437,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr9:45920408..45920437, - |
3.07e-86 | FFCP PHASE1:Mm9::chr1:173044327..173044331,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr1:173044327..173044331, + |
3.07e-86 | FFCP PHASE1:Mm9::chr14:8928284..8928331,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr14:8928284..8928331, + |
3.07e-86 | FFCP PHASE1:Mm9::chr11:118287827..118287833,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr11:118287827..118287833, - |
3.07e-86 | FFCP PHASE2:Mm9::chr18:35881716..35881727,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr18:35881716..35881727, - |
3.07e-86 | FFCP PHASE1:Mm9::chr4:86335502..86335509,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr4:86335502..86335509, + |
3.07e-86 | FFCP PHASE2:Mm9::chr8:25530071..25530072,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr8:25530071..25530072, + |
3.07e-86 | FFCP PHASE1:Mm9::chr10:8471698..8471701,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr10:8471698..8471701, + |
3.07e-86 | FFCP PHASE2:Mm9::chr2:84756280..84756286,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr2:84756280..84756286, + |
3.07e-86 | FFCP PHASE1:Mm9::chr2:84756280..84756286,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr2:84756280..84756286, + |
3.07e-86 | FFCP PHASE2:Mm9::chr17:12388232..12388237,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr17:12388232..12388237, + |
3.07e-86 | FFCP PHASE2:Mm9::chr15:88669906..88669914,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr15:88669906..88669914, + |
3.07e-86 | FFCP PHASE2:Mm9::chr15:59435855..59435878,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr15:59435855..59435878, - |
3.07e-86 | FFCP PHASE2:Mm9::chr9:45920408..45920437,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr9:45920408..45920437, - |
3.07e-86 | FFCP PHASE1:Mm9::chr15:32178407..32178408,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr15:32178407..32178408, - |
3.07e-86 | FFCP PHASE2:Mm9::chr11:68437375..68437378,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr11:68437375..68437378, + |
3.07e-86 | FFCP PHASE1:Mm9::chr12:86691503..86691504,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr12:86691503..86691504, - |
3.07e-86 | FFCP PHASE2:Mm9::chr11:109223779..109223789,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr11:109223779..109223789, - |
3.07e-86 | FFCP PHASE1:Mm9::chr10:93942324..93942342,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr10:93942324..93942342, - |
3.07e-86 | FFCP PHASE2:Mm9::chr6:34549876..34549892,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr6:34549876..34549892, - |
3.07e-86 | FFCP PHASE2:Mm9::chr12:86691575..86691580,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr12:86691575..86691580, - |
3.07e-86 | FFCP PHASE2:Mm9::chr11:88890706..88890745,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr11:88890706..88890745, + |
3.07e-86 | FFCP PHASE2:Mm9::chrX:166418658..166418683,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chrX:166418658..166418683, + |
3.07e-86 | FFCP PHASE2:Mm9::chr18:39513150..39513152,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr18:39513150..39513152, + |
3.07e-86 | FFCP PHASE2:Mm9::chr15:32178407..32178408,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr15:32178407..32178408, - |
3.07e-86 | FFCP PHASE2:Mm9::chr17:48822294..48822295,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr17:48822294..48822295, - |
3.07e-86 | FFCP PHASE2:Mm9::chr17:28107053..28107062,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr17:28107053..28107062, - |
3.07e-86 | FFCP PHASE1:Mm9::chr17:24807620..24807650,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr17:24807620..24807650, - |
3.07e-86 | FFCP PHASE1:Mm9::chr15:82193340..82193343,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr15:82193340..82193343, + |
3.07e-86 | FFCP PHASE2:Mm9::chr2:133323630..133323631,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr2:133323630..133323631, + |
3.07e-86 | FFCP PHASE1:Mm9::chr18:39297570..39297573,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr18:39297570..39297573, - |
3.07e-86 | FFCP PHASE1:Mm9::chr14:15179132..15179141,+#_103e79e5a3c1e504c4a5bd9b992197fa | p8@Il3ra |
3.07e-86 | FFCP PHASE1:Mm9::chr2:11935531..11935538,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr2:11935531..11935538, - |
3.07e-86 | FFCP PHASE1:Mm9::chr17:35093377..35093381,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr17:35093377..35093381, + |
3.07e-86 | FFCP PHASE2:Mm9::chr8:11183699..11183703,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr8:11183699..11183703, - |
3.07e-86 | FFCP PHASE2:Mm9::chr8:3311867..3311873,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr8:3311867..3311873, + |
3.07e-86 | FFCP PHASE1:Mm9::chr13:113543694..113543702,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr13:113543694..113543702, - |
3.07e-86 | FFCP PHASE2:Mm9::chr6:48398664..48398684,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr6:48398664..48398684, - |
3.07e-86 | FFCP PHASE1:Mm9::chr18:35881716..35881727,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr18:35881716..35881727, - |
3.07e-86 | FFCP PHASE1:Mm9::chr13:96429295..96429302,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr13:96429295..96429302, - |
3.07e-86 | FFCP PHASE2:Mm9::chr4:43407825..43407830,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr4:43407825..43407830, + |
3.07e-86 | FFCP PHASE1:Mm9::chr12:74684893..74684910,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr12:74684893..74684910, - |
3.07e-86 | FFCP PHASE2:Mm9::chr18:4336287..4336296,-#_103e79e5a3c1e504c4a5bd9b992197fa | p8@Map3k8 |
3.07e-86 | FFCP PHASE1:Mm9::chr8:11183699..11183703,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr8:11183699..11183703, - |
3.07e-86 | FFCP PHASE1:Mm9::chr5:53111093..53111095,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr5:53111093..53111095, + |
3.07e-86 | FFCP PHASE2:Mm9::chr18:47491114..47491123,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr18:47491114..47491123, + |
3.07e-86 | FFCP PHASE1:Mm9::chr10:117419958..117419964,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr10:117419958..117419964, + |
3.07e-86 | FFCP PHASE1:Mm9::chr17:35096519..35096524,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr17:35096519..35096524, + |
3.07e-86 | FFCP PHASE1:Mm9::chr16:28911901..28911906,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr16:28911901..28911906, - |
3.07e-86 | FFCP PHASE2:Mm9::chr17:35096519..35096524,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr17:35096519..35096524, + |
3.07e-86 | FFCP PHASE2:Mm9::chr8:86713876..86713879,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr8:86713876..86713879, + |
3.07e-86 | FFCP PHASE1:Mm9::chr1:66883923..66883955,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr1:66883923..66883955, - |
3.07e-86 | FFCP PHASE2:Mm9::chr15:82207617..82207621,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr15:82207617..82207621, + |
3.07e-86 | FFCP PHASE2:Mm9::chr13:5840965..5840966,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr13:5840965..5840966, + |
3.07e-86 | FFCP PHASE1:Mm9::chr10:21389022..21389032,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr10:21389022..21389032, + |
3.07e-86 | FFCP PHASE2:Mm9::chr13:113554186..113554192,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr13:113554186..113554192, + |
3.07e-86 | FFCP PHASE1:Mm9::chr17:12388232..12388237,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr17:12388232..12388237, + |
3.07e-86 | FFCP PHASE1:Mm9::chr8:127816016..127816021,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr8:127816016..127816021, + |
3.07e-86 | FFCP PHASE1:Mm9::chr10:85585949..85585969,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr10:85585949..85585969, - |
3.07e-86 | FFCP PHASE2:Mm9::chr8:111108947..111108951,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr8:111108947..111108951, + |
3.07e-86 | FFCP PHASE2:Mm9::chr17:34796428..34796430,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr17:34796428..34796430, - |
3.07e-86 | FFCP PHASE1:Mm9::chr3:121593688..121593695,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr3:121593688..121593695, + |
3.07e-86 | FFCP PHASE2:Mm9::chr5:64344878..64344887,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr5:64344878..64344887, - |
3.07e-86 | FFCP PHASE2:Mm9::chr11:107196799..107196814,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr11:107196799..107196814, + |
3.07e-86 | FFCP PHASE2:Mm9::chr12:100752983..100752984,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr12:100752983..100752984, + |
3.07e-86 | FFCP PHASE1:Mm9::chr12:100752983..100752984,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr12:100752983..100752984, + |
3.07e-86 | FFCP PHASE1:Mm9::chr4:126939557..126939562,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr4:126939557..126939562, + |
3.07e-86 | FFCP PHASE2:Mm9::chr6:91441074..91441080,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr6:91441074..91441080, - |
3.07e-86 | FFCP PHASE2:Mm9::chr6:51831254..51831256,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr6:51831254..51831256, - |
3.07e-86 | FFCP PHASE2:Mm9::chr3:104857794..104857802,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr3:104857794..104857802, - |
3.07e-86 | FFCP PHASE1:Mm9::chr12:86691530..86691535,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr12:86691530..86691535, - |
3.07e-86 | FFCP PHASE2:Mm9::chr11:48685851..48685860,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr11:48685851..48685860, - |
3.07e-86 | FFCP PHASE2:Mm9::chr11:115280630..115280662,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr11:115280630..115280662, + |
3.07e-86 | FFCP PHASE1:Mm9::chr15:90508949..90508955,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr15:90508949..90508955, - |
3.07e-86 | FFCP PHASE1:Mm9::chr5:114422970..114422985,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr5:114422970..114422985, - |
3.07e-86 | FFCP PHASE1:Mm9::chr18:60398371..60398393,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr18:60398371..60398393, - |
3.07e-86 | FFCP PHASE1:Mm9::chr5:124112234..124112240,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr5:124112234..124112240, + |
3.07e-86 | FFCP PHASE1:Mm9::chr11:107196799..107196814,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr11:107196799..107196814, + |
3.07e-86 | FFCP PHASE2:Mm9::chr17:35093616..35093631,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr17:35093616..35093631, - |
3.07e-86 | FFCP PHASE1:Mm9::chr7:87919399..87919406,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr7:87919399..87919406, + |
3.07e-86 | FFCP PHASE1:Mm9::chr10:60279719..60279737,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr10:60279719..60279737, - |
3.07e-86 | FFCP PHASE2:Mm9::chr3:121593688..121593695,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr3:121593688..121593695, + |
3.07e-86 | FFCP PHASE1:Mm9::chr15:82207617..82207621,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr15:82207617..82207621, + |
3.07e-86 | FFCP PHASE2:Mm9::chr7:52781901..52781904,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr7:52781901..52781904, + |
3.07e-86 | FFCP PHASE1:Mm9::chr18:39513150..39513152,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr18:39513150..39513152, + |
3.07e-86 | FFCP PHASE1:Mm9::chr17:35093616..35093631,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr17:35093616..35093631, - |
3.07e-86 | FFCP PHASE1:Mm9::chr13:113550715..113550722,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr13:113550715..113550722, - |