UBERON:0001280
From FANTOM5_SSTAR
Name: | liver parenchyma | ||
---|---|---|---|
Namespace: | FANTOM | ||
Definition: | "the functional units of the liver including the lobules." [MP:0008986] | ||
Xrefs: |
| ||
Synonyms: |
"hepatic parenchyma" EXACT [FMA:17540] "hepatic parenchyme" RELATED [VHOG:0000539] "liver parenchyme" EXACT [XAO:0000454] "parenchyma of liver" EXACT [FMA:17540] | ||
Comments: | This class was created automatically from a combination of ontologies | ||
Alt_id: |
UBERON:0003223 UBERON:FMA_17540-MA_0000366 |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000353(parenchyma),UBERON:0004119(endoderm-derived structure) |
---|---|
develops_from: | UBERON:0005171(hepatic duct),UBERON:0008835(hepatic diverticulum) |
part_of: | UBERON:0002107(liver) |
Children
part of: | UBERON:0001171 (portal lobule),UBERON:0004647 (liver lobule) |
---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10536-107G5 (cholangiocellular carcinoma cell line:HuH-28)
- 10629-108H8
- 10630-108H9
- 11521-119H9 (Hepatic Sinusoidal Endothelial Cells, donor1)
- 11601-120H8 (Hepatic Sinusoidal Endothelial Cells, donor2)
- 11682-122H8 (Hepatic Sinusoidal Endothelial Cells, donor3)
- 11830-124G3 (Mouse hepatic Sinusoidal Endothelial Cells, donor1)
- 11831-124G4
- 11832-124G5
- 13595-146E4 (liver sinusoidal endothelial cells, sham operation, biol_rep1)
... further results Mouse (Mus musculus)
- 10536-107G5 (cholangiocellular carcinoma cell line:HuH-28)
- 10629-108H8
- 10630-108H9
- 11521-119H9 (Hepatic Sinusoidal Endothelial Cells, donor1)
- 11601-120H8 (Hepatic Sinusoidal Endothelial Cells, donor2)
- 11682-122H8 (Hepatic Sinusoidal Endothelial Cells, donor3)
- 11830-124G3 (Mouse hepatic Sinusoidal Endothelial Cells, donor1)
- 11831-124G4
- 11832-124G5
- 13595-146E4 (liver sinusoidal endothelial cells, sham operation, biol_rep1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001280 (liver parenchyma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
P-value | FFCP | Short description |
---|---|---|
9.74e-88 | FFCP PHASE2:Hg19::chr7:158330204..158330217,+#_574b56c06426d590943c5cb24575133d | p2@ENST00000448698 |
9.74e-88 | FFCP PHASE1:Hg19::chr7:158330204..158330217,+#_574b56c06426d590943c5cb24575133d | p2@ENST00000448698 |
3.07e-86 | FFCP PHASE2:Mm9::chr13:96429295..96429302,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr13:96429295..96429302, - |
3.07e-86 | FFCP PHASE1:Mm9::chr12:87046930..87046933,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr12:87046930..87046933, + |
3.07e-86 | FFCP PHASE2:Mm9::chr5:76329688..76329692,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr5:76329688..76329692, - |
3.07e-86 | FFCP PHASE1:Mm9::chr10:85586219..85586227,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr10:85586219..85586227, + |
3.07e-86 | FFCP PHASE2:Mm9::chr3:104857794..104857802,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr3:104857794..104857802, - |
3.07e-86 | FFCP PHASE2:Mm9::chr15:59435855..59435878,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr15:59435855..59435878, - |
3.07e-86 | FFCP PHASE2:Mm9::chr11:48685851..48685860,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr11:48685851..48685860, - |
3.07e-86 | FFCP PHASE1:Mm9::chr13:113554186..113554192,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr13:113554186..113554192, + |
3.07e-86 | FFCP PHASE2:Mm9::chr6:92938260..92938264,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr6:92938260..92938264, - |
3.07e-86 | FFCP PHASE1:Mm9::chr9:116223548..116223551,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr9:116223548..116223551, + |
3.07e-86 | FFCP PHASE1:Mm9::chr11:119254092..119254100,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr11:119254092..119254100, - |
3.07e-86 | FFCP PHASE2:Mm9::chr5:32912678..32912687,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr5:32912678..32912687, + |
3.07e-86 | FFCP PHASE2:Mm9::chr6:51831254..51831256,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr6:51831254..51831256, - |
3.07e-86 | FFCP PHASE2:Mm9::chr1:138241693..138241697,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr1:138241693..138241697, + |
3.07e-86 | FFCP PHASE2:Mm9::chr3:121593688..121593695,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr3:121593688..121593695, + |
3.07e-86 | FFCP PHASE2:Mm9::chr19:29573929..29573932,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr19:29573929..29573932, + |
3.07e-86 | FFCP PHASE2:Mm9::chr10:85587155..85587188,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr10:85587155..85587188, + |
3.07e-86 | FFCP PHASE2:Mm9::chr11:109223779..109223789,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr11:109223779..109223789, - |
3.07e-86 | FFCP PHASE2:Mm9::chr16:11009028..11009039,+#_103e79e5a3c1e504c4a5bd9b992197fa | p4@Gm4262 |
3.07e-86 | FFCP PHASE1:Mm9::chr11:117737077..117737096,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr11:117737077..117737096, - |
3.07e-86 | FFCP PHASE2:Mm9::chr5:75375903..75375931,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr5:75375903..75375931, + |
3.07e-86 | FFCP PHASE1:Mm9::chr1:66883923..66883955,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr1:66883923..66883955, - |
3.07e-86 | FFCP PHASE1:Mm9::chr3:90270007..90270012,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr3:90270007..90270012, + |
3.07e-86 | FFCP PHASE1:Mm9::chr9:62199266..62199267,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr9:62199266..62199267, + |
3.07e-86 | FFCP PHASE2:Mm9::chr13:113554186..113554192,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr13:113554186..113554192, + |
3.07e-86 | FFCP PHASE1:Mm9::chr18:39297570..39297573,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr18:39297570..39297573, - |
3.07e-86 | FFCP PHASE1:Mm9::chr5:64344878..64344887,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr5:64344878..64344887, - |
3.07e-86 | FFCP PHASE2:Mm9::chr17:35106749..35106752,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr17:35106749..35106752, - |
3.07e-86 | FFCP PHASE1:Mm9::chr17:35093377..35093381,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr17:35093377..35093381, + |
3.07e-86 | FFCP PHASE2:Mm9::chr18:44793802..44793835,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr18:44793802..44793835, + |
3.07e-86 | FFCP PHASE2:Mm9::chr3:9705000..9705004,-#_103e79e5a3c1e504c4a5bd9b992197fa | p4@Pag1 |
3.07e-86 | FFCP PHASE2:Mm9::chr8:87745380..87745385,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr8:87745380..87745385, + |
3.07e-86 | FFCP PHASE2:Mm9::chr9:42915220..42915225,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr9:42915220..42915225, - |
3.07e-86 | FFCP PHASE1:Mm9::chr13:5840965..5840966,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr13:5840965..5840966, + |
3.07e-86 | FFCP PHASE2:Mm9::chr12:86691575..86691580,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr12:86691575..86691580, - |
3.07e-86 | FFCP PHASE1:Mm9::chr17:24807620..24807650,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr17:24807620..24807650, - |
3.07e-86 | FFCP PHASE1:Mm9::chr4:62009160..62009164,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr4:62009160..62009164, - |
3.07e-86 | FFCP PHASE2:Mm9::chr18:38831400..38831402,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr18:38831400..38831402, - |
3.07e-86 | FFCP PHASE1:Mm9::chr18:35881716..35881727,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr18:35881716..35881727, - |
3.07e-86 | FFCP PHASE2:Mm9::chr17:35093377..35093381,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr17:35093377..35093381, + |
3.07e-86 | FFCP PHASE1:Mm9::chr8:25530071..25530072,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr8:25530071..25530072, + |
3.07e-86 | FFCP PHASE2:Mm9::chr5:124112234..124112240,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr5:124112234..124112240, + |
3.07e-86 | FFCP PHASE2:Mm9::chr14:15179132..15179141,+#_103e79e5a3c1e504c4a5bd9b992197fa | p8@Il3ra |
3.07e-86 | FFCP PHASE1:Mm9::chr9:42915185..42915192,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr9:42915185..42915192, - |
3.07e-86 | FFCP PHASE1:Mm9::chr12:25364645..25364655,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr12:25364645..25364655, + |
3.07e-86 | FFCP PHASE2:Mm9::chr11:54785454..54785456,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr11:54785454..54785456, - |
3.07e-86 | FFCP PHASE1:Mm9::chr14:8928284..8928331,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr14:8928284..8928331, + |
3.07e-86 | FFCP PHASE1:Mm9::chr3:104857794..104857802,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr3:104857794..104857802, - |
3.07e-86 | FFCP PHASE2:Mm9::chr9:116223548..116223551,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr9:116223548..116223551, + |
3.07e-86 | FFCP PHASE1:Mm9::chr9:45920408..45920437,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr9:45920408..45920437, - |
3.07e-86 | FFCP PHASE1:Mm9::chr6:48398664..48398684,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr6:48398664..48398684, - |
3.07e-86 | FFCP PHASE2:Mm9::chr9:45920408..45920437,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr9:45920408..45920437, - |
3.07e-86 | FFCP PHASE1:Mm9::chr13:113542610..113542614,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr13:113542610..113542614, + |
3.07e-86 | FFCP PHASE2:Mm9::chr15:82209805..82209851,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr15:82209805..82209851, + |
3.07e-86 | FFCP PHASE1:Mm9::chr5:75375903..75375931,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr5:75375903..75375931, + |
3.07e-86 | FFCP PHASE1:Mm9::chr17:35096519..35096524,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr17:35096519..35096524, + |
3.07e-86 | FFCP PHASE2:Mm9::chr10:85585949..85585969,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr10:85585949..85585969, - |
3.07e-86 | FFCP PHASE1:Mm9::chr7:118133901..118133904,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr7:118133901..118133904, - |
3.07e-86 | FFCP PHASE2:Mm9::chr10:117419958..117419964,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr10:117419958..117419964, + |
3.07e-86 | FFCP PHASE1:Mm9::chr15:32178407..32178408,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr15:32178407..32178408, - |
3.07e-86 | FFCP PHASE2:Mm9::chr4:100890388..100890423,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr4:100890388..100890423, + |
3.07e-86 | FFCP PHASE1:Mm9::chr6:15678147..15678149,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr6:15678147..15678149, - |
3.07e-86 | FFCP PHASE1:Mm9::chr8:114250006..114250039,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr8:114250006..114250039, - |
3.07e-86 | FFCP PHASE2:Mm9::chr5:114422970..114422985,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr5:114422970..114422985, - |
3.07e-86 | FFCP PHASE2:Mm9::chr15:32178407..32178408,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr15:32178407..32178408, - |
3.07e-86 | FFCP PHASE2:Mm9::chr8:114123814..114123821,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr8:114123814..114123821, - |
3.07e-86 | FFCP PHASE2:Mm9::chr2:11935531..11935538,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr2:11935531..11935538, - |
3.07e-86 | FFCP PHASE1:Mm9::chr14:15179132..15179141,+#_103e79e5a3c1e504c4a5bd9b992197fa | p8@Il3ra |
3.07e-86 | FFCP PHASE2:Mm9::chr2:169549462..169549477,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr2:169549462..169549477, + |
3.07e-86 | FFCP PHASE1:Mm9::chr10:93895817..93895819,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr10:93895817..93895819, - |
3.07e-86 | FFCP PHASE2:Mm9::chr17:48822294..48822295,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr17:48822294..48822295, - |
3.07e-86 | FFCP PHASE1:Mm9::chr7:109031260..109031268,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr7:109031260..109031268, + |
3.07e-86 | FFCP PHASE1:Mm9::chr11:109223779..109223789,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr11:109223779..109223789, - |
3.07e-86 | FFCP PHASE2:Mm9::chr18:5125608..5125613,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr18:5125608..5125613, + |
3.07e-86 | FFCP PHASE1:Mm9::chr17:12388232..12388237,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr17:12388232..12388237, + |
3.07e-86 | FFCP PHASE1:Mm9::chr15:82193340..82193343,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr15:82193340..82193343, + |
3.07e-86 | FFCP PHASE2:Mm9::chr13:113542610..113542614,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr13:113542610..113542614, + |
3.07e-86 | FFCP PHASE2:Mm9::chr13:96429602..96429605,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr13:96429602..96429605, - |
3.07e-86 | FFCP PHASE1:Mm9::chr13:96429295..96429302,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr13:96429295..96429302, - |
3.07e-86 | FFCP PHASE1:Mm9::chr10:85587155..85587188,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr10:85587155..85587188, + |
3.07e-86 | FFCP PHASE2:Mm9::chr7:118133901..118133904,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr7:118133901..118133904, - |
3.07e-86 | FFCP PHASE2:Mm9::chr11:107196799..107196814,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr11:107196799..107196814, + |
3.07e-86 | FFCP PHASE1:Mm9::chr6:91441074..91441080,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr6:91441074..91441080, - |
3.07e-86 | FFCP PHASE1:Mm9::chr11:68437375..68437378,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr11:68437375..68437378, + |
3.07e-86 | FFCP PHASE1:Mm9::chr6:129180613..129180616,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr6:129180613..129180616, + |
3.07e-86 | FFCP PHASE2:Mm9::chr5:33088768..33088773,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr5:33088768..33088773, + |
3.07e-86 | FFCP PHASE2:Mm9::chr15:97402708..97402712,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr15:97402708..97402712, + |
3.07e-86 | FFCP PHASE2:Mm9::chr4:86335502..86335509,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr4:86335502..86335509, + |
3.07e-86 | FFCP PHASE2:Mm9::chr7:117101788..117101793,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr7:117101788..117101793, + |
3.07e-86 | FFCP PHASE1:Mm9::chr3:9705000..9705004,-#_103e79e5a3c1e504c4a5bd9b992197fa | p4@Pag1 |
3.07e-86 | FFCP PHASE1:Mm9::chr18:60398371..60398393,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr18:60398371..60398393, - |
3.07e-86 | FFCP PHASE1:Mm9::chr2:129407463..129407468,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr2:129407463..129407468, - |
3.07e-86 | FFCP PHASE2:Mm9::chr11:115280630..115280662,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr11:115280630..115280662, + |
3.07e-86 | FFCP PHASE1:Mm9::chr11:117829935..117829959,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr11:117829935..117829959, - |
3.07e-86 | FFCP PHASE2:Mm9::chr4:57687477..57687488,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr4:57687477..57687488, + |
3.07e-86 | FFCP PHASE1:Mm9::chr18:39513150..39513152,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr18:39513150..39513152, + |
3.07e-86 | FFCP PHASE2:Mm9::chr8:114250006..114250039,-#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr8:114250006..114250039, - |
3.07e-86 | FFCP PHASE2:Mm9::chr10:21389022..21389032,+#_103e79e5a3c1e504c4a5bd9b992197fa | p@chr10:21389022..21389032, + |