UBERON:0001905
From FANTOM5_SSTAR
Name: | pineal body | ||
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Namespace: | FANTOM | ||
Definition: | "The pineal body is an unpaired glandular organ subdivision shaped somewhat like a pine cone. It is attached on the midline near the posterior and habenular commissures of the epithalamus." [FMA:62033, Wikipedia:Pineal_gland] | ||
Xrefs: |
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Synonyms: |
"corpus pineale" EXACT [] "epiphysis" RELATED [ZFA:0000019] "epiphysis cerebri" RELATED [Wikipedia:Epiphysis_cerebri] "glandula pinealis" EXACT [FMA:TA] "glandula pinealis" EXACT [FMA:62033, FMA:TA] "pineal gland" EXACT [FMA:62033] "pineal organ" EXACT [ZFA:0000019] | ||
Comments: | AO notes: part of midbrain in HOG, but this is inconsistent with ABA. | ||
Alt_id: | UBERON:FMA_62033-MA_0000175-XAO_0000160 | ||
Subset: |
organ_slim uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0002757(regional part of epithalamus),UBERON:0003296(gland of diencephalon),UBERON:0010134(secretory circumventricular organ) |
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part_of: | UBERON:0015238(pineal complex) |
Children
derives from: | FF:0010160 (human pineal gland - adult sample) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10160-103A7 (pineal gland, adult, donor10252)
- 10179-103C8 (pineal gland - adult, donor10196)
- 10377-105G8 (pineal gland, adult, donor10258)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001905 (pineal body), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
P-value | FFCP | Short description |
---|---|---|
3.29e-195 | FFCP PHASE1:Hg19::chr12:81859007..81859036,+#_842633804e145228aa5bd41c0ffb3985 | p@chr12:81859007..81859036, + |
3.29e-195 | FFCP PHASE1:Hg19::chr5:136699666..136699696,-#_842633804e145228aa5bd41c0ffb3985 | p@chr5:136699666..136699696, - |
3.29e-195 | FFCP PHASE1:Hg19::chr2:44903714..44903719,+#_842633804e145228aa5bd41c0ffb3985 | p8@CAMKMT |
3.29e-195 | FFCP PHASE2:Hg19::chr3:54952462..54952471,-#_842633804e145228aa5bd41c0ffb3985 | p@chr3:54952462..54952471, - |
3.29e-195 | FFCP PHASE1:Hg19::chr16:17930871..17930877,-#_842633804e145228aa5bd41c0ffb3985 | p@chr16:17930871..17930877, - |
3.29e-195 | FFCP PHASE2:Hg19::chr18:56963107..56963117,-#_842633804e145228aa5bd41c0ffb3985 | p@chr18:56963107..56963117, - |
3.29e-195 | FFCP PHASE1:Hg19::chr3:192894664..192894677,-#_842633804e145228aa5bd41c0ffb3985 | p1@ENST00000414895 |
3.29e-195 | FFCP PHASE1:Hg19::chr5:119868809..119868839,+#_842633804e145228aa5bd41c0ffb3985 | p@chr5:119868809..119868839, + |
3.29e-195 | FFCP PHASE2:Hg19::chr2:17185712..17185735,+#_842633804e145228aa5bd41c0ffb3985 | p@chr2:17185712..17185735, + |
3.29e-195 | FFCP PHASE1:Hg19::chr9:25264978..25265001,+#_842633804e145228aa5bd41c0ffb3985 | p@chr9:25264978..25265001, + |
3.29e-195 | FFCP PHASE2:Hg19::chr8:135504314..135504320,-#_842633804e145228aa5bd41c0ffb3985 | p@chr8:135504314..135504320, - |
3.29e-195 | FFCP PHASE1:Hg19::chr13:21399081..21399087,+#_842633804e145228aa5bd41c0ffb3985 | p@chr13:21399081..21399087, + |
3.29e-195 | FFCP PHASE2:Hg19::chr12:6956383..6956390,+#_842633804e145228aa5bd41c0ffb3985 | p@chr12:6956383..6956390, + |
3.29e-195 | FFCP PHASE1:Hg19::chr18:56963093..56963105,-#_842633804e145228aa5bd41c0ffb3985 | p@chr18:56963093..56963105, - |
3.29e-195 | FFCP PHASE1:Hg19::chr16:1210506..1210513,-#_842633804e145228aa5bd41c0ffb3985 | p@chr16:1210506..1210513, - |
3.29e-195 | FFCP PHASE2:Hg19::chr11:72297712..72297715,-#_842633804e145228aa5bd41c0ffb3985 | p@chr11:72297712..72297715, - |
3.29e-195 | FFCP PHASE2:Hg19::chrX:33146501..33146521,-#_842633804e145228aa5bd41c0ffb3985 | p32@DMD |
3.29e-195 | FFCP PHASE2:Hg19::chr2:17075761..17075773,+#_842633804e145228aa5bd41c0ffb3985 | p@chr2:17075761..17075773, + |
3.29e-195 | FFCP PHASE1:Hg19::chr1:204620238..204620253,+#_842633804e145228aa5bd41c0ffb3985 | p@chr1:204620238..204620253, + |
3.29e-195 | FFCP PHASE2:Hg19::chr8:135473983..135473986,-#_842633804e145228aa5bd41c0ffb3985 | p@chr8:135473983..135473986, - |
3.29e-195 | FFCP PHASE1:Hg19::chr12:49621658..49621666,+#_842633804e145228aa5bd41c0ffb3985 | p21@TUBA1C |
3.29e-195 | FFCP PHASE1:Hg19::chr11:18067951..18067954,-#_842633804e145228aa5bd41c0ffb3985 | p@chr11:18067951..18067954, - |
3.29e-195 | FFCP PHASE2:Hg19::chr8:87751918..87751928,-#_842633804e145228aa5bd41c0ffb3985 | p@chr8:87751918..87751928, - |
3.29e-195 | FFCP PHASE2:Hg19::chr8:116127086..116127103,+#_842633804e145228aa5bd41c0ffb3985 | p@chr8:116127086..116127103, + |
3.29e-195 | FFCP PHASE2:Hg19::chr5:135732714..135732721,-#_842633804e145228aa5bd41c0ffb3985 | p2@ENST00000514282 |
3.29e-195 | FFCP PHASE2:Hg19::chr3:100942376..100942381,-#_842633804e145228aa5bd41c0ffb3985 | p@chr3:100942376..100942381, - |
3.29e-195 | FFCP PHASE1:Hg19::chr8:135520309..135520324,-#_842633804e145228aa5bd41c0ffb3985 | p@chr8:135520309..135520324, - |
3.29e-195 | FFCP PHASE2:Hg19::chr15:55470964..55470974,-#_842633804e145228aa5bd41c0ffb3985 | p@chr15:55470964..55470974, - |
3.29e-195 | FFCP PHASE2:Hg19::chr4:20985690..20985695,-#_842633804e145228aa5bd41c0ffb3985 | p38@KCNIP4 |
3.29e-195 | FFCP PHASE1:Hg19::chr12:6954834..6954841,+#_842633804e145228aa5bd41c0ffb3985 | p9@GNB3 |
3.29e-195 | FFCP PHASE1:Hg19::chr3:54952432..54952459,-#_842633804e145228aa5bd41c0ffb3985 | p@chr3:54952432..54952459, - |
3.29e-195 | FFCP PHASE2:Hg19::chr5:119799576..119799585,+#_842633804e145228aa5bd41c0ffb3985 | p10@PRR16 |
3.29e-195 | FFCP PHASE1:Hg19::chr8:135472861..135472868,-#_842633804e145228aa5bd41c0ffb3985 | p@chr8:135472861..135472868, - |
3.29e-195 | FFCP PHASE2:Hg19::chr1:99798419..99798422,-#_842633804e145228aa5bd41c0ffb3985 | p@chr1:99798419..99798422, - |
3.29e-195 | FFCP PHASE1:Hg19::chr6:13009334..13009341,-#_842633804e145228aa5bd41c0ffb3985 | p@chr6:13009334..13009341, - |
3.29e-195 | FFCP PHASE1:Hg19::chr12:56582028..56582062,+#_842633804e145228aa5bd41c0ffb3985 | p@chr12:56582028..56582062, + |
3.29e-195 | FFCP PHASE2:Hg19::chr9:88661694..88661709,-#_842633804e145228aa5bd41c0ffb3985 | p@chr9:88661694..88661709, - |
3.29e-195 | FFCP PHASE1:Hg19::chr2:48705144..48705150,+#_842633804e145228aa5bd41c0ffb3985 | p@chr2:48705144..48705150, + |
3.29e-195 | FFCP PHASE2:Hg19::chr11:18053180..18053192,-#_842633804e145228aa5bd41c0ffb3985 | p@chr11:18053180..18053192, - |
3.29e-195 | FFCP PHASE1:Hg19::chr16:18066319..18066337,-#_842633804e145228aa5bd41c0ffb3985 | p@chr16:18066319..18066337, - |
3.29e-195 | FFCP PHASE1:Hg19::chr11:18041194..18041197,-#_842633804e145228aa5bd41c0ffb3985 | p@chr11:18041194..18041197, - |
3.29e-195 | FFCP PHASE1:Hg19::chr2:17065916..17065929,+#_842633804e145228aa5bd41c0ffb3985 | p@chr2:17065916..17065929, + |
3.29e-195 | FFCP PHASE2:Hg19::chr10:80984180..80984190,-#_842633804e145228aa5bd41c0ffb3985 | p@chr10:80984180..80984190, - |
3.29e-195 | FFCP PHASE2:Hg19::chr9:37668094..37668097,+#_842633804e145228aa5bd41c0ffb3985 | p6@FRMPD1 |
3.29e-195 | FFCP PHASE2:Hg19::chr8:135515957..135515964,+#_842633804e145228aa5bd41c0ffb3985 | p@chr8:135515957..135515964, + |
3.29e-195 | FFCP PHASE2:Hg19::chr2:216447425..216447432,-#_842633804e145228aa5bd41c0ffb3985 | p2@ENST00000457625 |
3.29e-195 | FFCP PHASE1:Hg19::chr8:116085391..116085419,+#_842633804e145228aa5bd41c0ffb3985 | p@chr8:116085391..116085419, + |
3.29e-195 | FFCP PHASE1:Hg19::chr5:135732675..135732680,-#_842633804e145228aa5bd41c0ffb3985 | p3@ENST00000514282 |
3.29e-195 | FFCP PHASE2:Hg19::chr13:52650486..52650491,-#_842633804e145228aa5bd41c0ffb3985 | p@chr13:52650486..52650491, - |
3.29e-195 | FFCP PHASE1:Hg19::chr12:99734965..99734976,-#_842633804e145228aa5bd41c0ffb3985 | p@chr12:99734965..99734976, - |
3.29e-195 | FFCP PHASE1:Hg19::chr5:119799539..119799543,+#_842633804e145228aa5bd41c0ffb3985 | p13@PRR16 |
3.29e-195 | FFCP PHASE2:Hg19::chr8:135499228..135499260,-#_842633804e145228aa5bd41c0ffb3985 | p@chr8:135499228..135499260, - |
3.29e-195 | FFCP PHASE2:Hg19::chr3:101038595..101038604,-#_842633804e145228aa5bd41c0ffb3985 | p@chr3:101038595..101038604, - |
3.29e-195 | FFCP PHASE1:Hg19::chrX:146290937..146290942,+#_842633804e145228aa5bd41c0ffb3985 | p@chrX:146290937..146290942, + |
3.29e-195 | FFCP PHASE2:Hg19::chr14:49512240..49512248,-#_842633804e145228aa5bd41c0ffb3985 | p@chr14:49512240..49512248, - |
3.29e-195 | FFCP PHASE1:Hg19::chr7:9782610..9782613,+#_842633804e145228aa5bd41c0ffb3985 | p@chr7:9782610..9782613, + |
3.29e-195 | FFCP PHASE1:Hg19::chr2:108602341..108602352,+#_842633804e145228aa5bd41c0ffb3985 | p@chr2:108602341..108602352, + |
3.29e-195 | FFCP PHASE1:Hg19::chr8:135473205..135473218,-#_842633804e145228aa5bd41c0ffb3985 | p@chr8:135473205..135473218, - |
3.29e-195 | FFCP PHASE2:Hg19::chr8:135473876..135473885,-#_842633804e145228aa5bd41c0ffb3985 | p@chr8:135473876..135473885, - |
3.29e-195 | FFCP PHASE1:Hg19::chr11:18063669..18063678,-#_842633804e145228aa5bd41c0ffb3985 | p@chr11:18063669..18063678, - |
3.29e-195 | FFCP PHASE1:Hg19::chr7:9186866..9186885,-#_842633804e145228aa5bd41c0ffb3985 | p@chr7:9186866..9186885, - |
3.29e-195 | FFCP PHASE1:Hg19::chr13:56628548..56628553,-#_842633804e145228aa5bd41c0ffb3985 | p@chr13:56628548..56628553, - |
3.29e-195 | FFCP PHASE1:Hg19::chr20:44991864..44991887,-#_842633804e145228aa5bd41c0ffb3985 | p10@SLC35C2 |
3.29e-195 | FFCP PHASE1:Hg19::chr8:135515939..135515941,+#_842633804e145228aa5bd41c0ffb3985 | p@chr8:135515939..135515941, + |
3.29e-195 | FFCP PHASE1:Hg19::chr17:74463608..74463612,+#_842633804e145228aa5bd41c0ffb3985 | p5@AANAT |
3.29e-195 | FFCP PHASE2:Hg19::chr6:13009334..13009341,-#_842633804e145228aa5bd41c0ffb3985 | p@chr6:13009334..13009341, - |
3.29e-195 | FFCP PHASE1:Hg19::chr2:216447404..216447411,-#_842633804e145228aa5bd41c0ffb3985 | p1@ENST00000457625 |
3.29e-195 | FFCP PHASE2:Hg19::chr11:18067951..18067954,-#_842633804e145228aa5bd41c0ffb3985 | p@chr11:18067951..18067954, - |
3.29e-195 | FFCP PHASE2:Hg19::chr16:51808960..51808964,-#_842633804e145228aa5bd41c0ffb3985 | p@chr16:51808960..51808964, - |
3.29e-195 | FFCP PHASE1:Hg19::chr1:99860753..99860764,-#_842633804e145228aa5bd41c0ffb3985 | p@chr1:99860753..99860764, - |
3.29e-195 | FFCP PHASE1:Hg19::chr8:135474173..135474185,-#_842633804e145228aa5bd41c0ffb3985 | p@chr8:135474173..135474185, - |
3.29e-195 | FFCP PHASE2:Hg19::chr8:135521466..135521470,+#_842633804e145228aa5bd41c0ffb3985 | p@chr8:135521466..135521470, + |
3.29e-195 | FFCP PHASE1:Hg19::chr12:55422565..55422604,+#_842633804e145228aa5bd41c0ffb3985 | p@chr12:55422565..55422604, + |
3.29e-195 | FFCP PHASE2:Hg19::chr14:55282406..55282415,-#_842633804e145228aa5bd41c0ffb3985 | p@chr14:55282406..55282415, - |
3.29e-195 | FFCP PHASE1:Hg19::chr12:121088121..121088131,+#_842633804e145228aa5bd41c0ffb3985 | p11@CABP1 |
3.29e-195 | FFCP PHASE2:Hg19::chr2:17185958..17185998,+#_842633804e145228aa5bd41c0ffb3985 | p@chr2:17185958..17185998, + |
3.29e-195 | FFCP PHASE2:Hg19::chr8:135504337..135504342,-#_842633804e145228aa5bd41c0ffb3985 | p@chr8:135504337..135504342, - |
3.29e-195 | FFCP PHASE2:Hg19::chr16:18066392..18066397,-#_842633804e145228aa5bd41c0ffb3985 | p@chr16:18066392..18066397, - |
3.29e-195 | FFCP PHASE2:Hg19::chr3:17085717..17085733,-#_842633804e145228aa5bd41c0ffb3985 | p2@PLCL2-AS1 |
3.29e-195 | FFCP PHASE1:Hg19::chr18:56963107..56963117,-#_842633804e145228aa5bd41c0ffb3985 | p@chr18:56963107..56963117, - |
3.29e-195 | FFCP PHASE2:Hg19::chr7:9782610..9782613,+#_842633804e145228aa5bd41c0ffb3985 | p@chr7:9782610..9782613, + |
3.29e-195 | FFCP PHASE2:Hg19::chr11:72297717..72297725,-#_842633804e145228aa5bd41c0ffb3985 | p@chr11:72297717..72297725, - |
3.29e-195 | FFCP PHASE2:Hg19::chrX:33146637..33146644,-#_842633804e145228aa5bd41c0ffb3985 | p35@DMD |
3.29e-195 | FFCP PHASE2:Hg19::chr16:51174216..51174239,-#_842633804e145228aa5bd41c0ffb3985 | p@chr16:51174216..51174239, - |
3.29e-195 | FFCP PHASE1:Hg19::chr8:135473472..135473477,-#_842633804e145228aa5bd41c0ffb3985 | p@chr8:135473472..135473477, - |
3.29e-195 | FFCP PHASE1:Hg19::chr11:18067959..18067962,-#_842633804e145228aa5bd41c0ffb3985 | p@chr11:18067959..18067962, - |
3.29e-195 | FFCP PHASE1:Hg19::chr1:57975398..57975401,+#_842633804e145228aa5bd41c0ffb3985 | p@chr1:57975398..57975401, + |
3.29e-195 | FFCP PHASE1:Hg19::chr7:9202487..9202498,-#_842633804e145228aa5bd41c0ffb3985 | p@chr7:9202487..9202498, - |
3.29e-195 | FFCP PHASE2:Hg19::chr8:87751931..87751947,-#_842633804e145228aa5bd41c0ffb3985 | p@chr8:87751931..87751947, - |
3.29e-195 | FFCP PHASE2:Hg19::chr7:9186866..9186885,-#_842633804e145228aa5bd41c0ffb3985 | p@chr7:9186866..9186885, - |
3.29e-195 | FFCP PHASE2:Hg19::chr3:100942645..100942655,-#_842633804e145228aa5bd41c0ffb3985 | p@chr3:100942645..100942655, - |
3.29e-195 | FFCP PHASE2:Hg19::chr20:44991864..44991887,-#_842633804e145228aa5bd41c0ffb3985 | p10@SLC35C2 |
3.29e-195 | FFCP PHASE1:Hg19::chr16:50898038..50898042,-#_842633804e145228aa5bd41c0ffb3985 | p@chr16:50898038..50898042, - |
3.29e-195 | FFCP PHASE2:Hg19::chr11:18041194..18041197,-#_842633804e145228aa5bd41c0ffb3985 | p@chr11:18041194..18041197, - |
3.29e-195 | FFCP PHASE1:Hg19::chr12:15134610..15134617,+#_842633804e145228aa5bd41c0ffb3985 | p@chr12:15134610..15134617, + |
3.29e-195 | FFCP PHASE2:Hg19::chr15:55470984..55471009,-#_842633804e145228aa5bd41c0ffb3985 | p@chr15:55470984..55471009, - |
3.29e-195 | FFCP PHASE2:Hg19::chr13:68306577..68306607,+#_842633804e145228aa5bd41c0ffb3985 | p@chr13:68306577..68306607, + |
3.29e-195 | FFCP PHASE2:Hg19::chr4:20985967..20985972,-#_842633804e145228aa5bd41c0ffb3985 | p28@KCNIP4 |
3.29e-195 | FFCP PHASE1:Hg19::chr3:54952462..54952471,-#_842633804e145228aa5bd41c0ffb3985 | p@chr3:54952462..54952471, - |
3.29e-195 | FFCP PHASE2:Hg19::chr17:6328202..6328224,-#_842633804e145228aa5bd41c0ffb3985 | p1@BC014398 |
Property "Property value" (as page type) with input value "UBPROP:0000001 "A circumscribed swelling, includes the pineal primordium that appears late in the segmentation period in the dorsal midline of the diencephalon. Kimmel et al, 1995.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical structure which is a medial outgrowth of the thalamus on the dorsal surface of the brain. This structure is light sensitive and secretes melatonin when exposed to prolonged darkness.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000002 "relationship loss: part_of pineal complex (TAO:0001359)[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.