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UBERON:0001949

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Name:gingival epithelium
Namespace:FANTOM
Definition:"A stratified squamous epithelium consisting of a basal layer; it is keratinized or parakeratinized[BTO]." [BTO:0004998]
Xrefs:
links:

BTO:0004998
FMA:62423
MA:0001576

ncithesaurus:Gingival_Epithelium
Synonyms: "epithelial tissue of gingiva" EXACT [OBOL:automatic]
"epithelium of gingiva" EXACT []
"gingiva epithelial tissue" EXACT [OBOL:automatic]
"gingiva epithelium" EXACT [OBOL:automatic]
Alt_id: UBERON:FMA_62423-MA_0001576

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data

Parents

is_a:UBERON:0002424(oral epithelium),UBERON:0006915(stratified squamous epithelium)
part_of:UBERON:0001828(gingiva)



Children

part of:CL:0002621 (gingival epithelial cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples
It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

  • 11221-116B6 (Gingival epithelial cells, donor1 (GEA11))
  • 11302-117B6 (Gingival epithelial cells, donor2 (GEA14))
  • 11379-118B2 (Gingival epithelial cells, donor3 (GEA15))


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001949 (gingival epithelium), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data

P-valueFFCPShort description
4.06e-99FFCP PHASE2:Hg19::chr4:143470541..143470551,+#_1f7f72d444e25a6c09fcb6c286ac452dp@chr4:143470541..143470551, +
4.06e-99FFCP PHASE1:Hg19::chr4:143470541..143470551,+#_1f7f72d444e25a6c09fcb6c286ac452dp@chr4:143470541..143470551, +
1.52e-87FFCP PHASE1:Hg19::chr1:14465017..14465026,+#_dd14ca5959de4fbd059438420b177d70p@chr1:14465017..14465026, +
1.52e-87FFCP PHASE2:Hg19::chr17:73753856..73753871,+#_dd14ca5959de4fbd059438420b177d70p1@CU674593
1.52e-87FFCP PHASE2:Hg19::chr1:14465017..14465026,+#_dd14ca5959de4fbd059438420b177d70p@chr1:14465017..14465026, +
1.52e-87FFCP PHASE1:Hg19::chr17:73753856..73753871,+#_dd14ca5959de4fbd059438420b177d70p1@CU674593
2.28e-85FFCP PHASE2:Hg19::chr8:130798890..130798901,-#_510f319bae66e927778859504192ba4ap3@GSDMC
2.28e-85FFCP PHASE1:Hg19::chr8:130798890..130798901,-#_510f319bae66e927778859504192ba4ap3@GSDMC
5.41e-85FFCP PHASE1:Hg19::chr11:93754560..93754567,+#_dbb58d4af95d53f8ccf1f6f7f674e403p@chr11:93754560..93754567, +
5.41e-85FFCP PHASE2:Hg19::chr11:93754560..93754567,+#_dbb58d4af95d53f8ccf1f6f7f674e403p@chr11:93754560..93754567, +
2.27e-84FFCP PHASE1:Hg19::chr10:105791095..105791110,-#_17d40413fbf7bf733ec29fa4df662ed1p@chr10:105791095..105791110, -
2.27e-84FFCP PHASE2:Hg19::chr10:105791095..105791110,-#_17d40413fbf7bf733ec29fa4df662ed1p@chr10:105791095..105791110, -
1.01e-74FFCP PHASE1:Hg19::chr7:40883542..40883550,+#_c5e0da855590070edb76f2e0780d3f3cp@chr7:40883542..40883550, +
1.01e-74FFCP PHASE2:Hg19::chr7:40883542..40883550,+#_c5e0da855590070edb76f2e0780d3f3cp@chr7:40883542..40883550, +
1.01e-74FFCP PHASE2:Hg19::chr1:153533849..153533860,-#_c5e0da855590070edb76f2e0780d3f3cp@chr1:153533849..153533860, -
1.01e-74FFCP PHASE1:Hg19::chr1:153533849..153533860,-#_c5e0da855590070edb76f2e0780d3f3cp@chr1:153533849..153533860, -
2.14e-74FFCP PHASE1:Hg19::chr3:190252374..190252383,-#_cc2da72e90e2eb276f628a138e150637p@chr3:190252374..190252383, -
2.14e-74FFCP PHASE2:Hg19::chr3:190252374..190252383,-#_cc2da72e90e2eb276f628a138e150637p@chr3:190252374..190252383, -
4.55e-74FFCP PHASE2:Hg19::chr21:44957893..44957903,-#_1526422914d2e17b9a55c1c96695112ep@chr21:44957893..44957903, -
4.55e-74FFCP PHASE1:Hg19::chr21:44957893..44957903,-#_1526422914d2e17b9a55c1c96695112ep@chr21:44957893..44957903, -
9.64e-74FFCP PHASE2:Hg19::chr10:106205489..106205498,+#_fbb30c1454dfa876cb3d5fe89f98bf56p@chr10:106205489..106205498, +
9.64e-74FFCP PHASE1:Hg19::chr10:106205489..106205498,+#_fbb30c1454dfa876cb3d5fe89f98bf56p@chr10:106205489..106205498, +
3.35e-66FFCP PHASE1:Hg19::chr15:40531729..40531738,+#_a490473bb7fc3f6f0bd768e052facac5p15@PAK6
3.35e-66FFCP PHASE2:Hg19::chr15:40531729..40531738,+#_a490473bb7fc3f6f0bd768e052facac5p15@PAK6
4.71e-66FFCP PHASE2:Hg19::chr16:82671490..82671521,+#_1338156f928ec3b93db5987c67395d36p@chr16:82671490..82671521, +
4.71e-66FFCP PHASE1:Hg19::chr16:82671490..82671521,+#_1338156f928ec3b93db5987c67395d36p@chr16:82671490..82671521, +
6.53e-66FFCP PHASE2:Hg19::chr9:108870138..108870152,+#_88253062b9407ee9b760d0c07788d9f8p1@uc004bcw.2
6.53e-66FFCP PHASE1:Hg19::chr9:108870138..108870152,+#_88253062b9407ee9b760d0c07788d9f8p1@uc004bcw.2
1.22e-59FFCP PHASE2:Hg19::chr11:13030878..13030889,+#_b6516beccc6bff060f5f8c40f0d9e788p2@RASSF10
1.22e-59FFCP PHASE1:Hg19::chr11:13030878..13030889,+#_b6516beccc6bff060f5f8c40f0d9e788p2@RASSF10
1.83e-59FFCP PHASE1:Hg19::chr18:20493879..20493891,+#_371d58ec95c3aea84037b19bb5fd44f5p@chr18:20493879..20493891, +
1.83e-59FFCP PHASE2:Hg19::chr18:20493879..20493891,+#_371d58ec95c3aea84037b19bb5fd44f5p@chr18:20493879..20493891, +
2.73e-59FFCP PHASE2:Hg19::chr8:124850358..124850380,+#_c3ab95f7db7d3d3c87081166fd8a5424p@chr8:124850358..124850380, +
2.73e-59FFCP PHASE1:Hg19::chr8:124850358..124850380,+#_c3ab95f7db7d3d3c87081166fd8a5424p@chr8:124850358..124850380, +
8.69e-55FFCP PHASE1:Hg19::chr13:30259768..30259777,+#_6831e7347ea1ca2e5c4102cf2e910563p@chr13:30259768..30259777, +
8.69e-55FFCP PHASE2:Hg19::chr13:30259768..30259777,+#_6831e7347ea1ca2e5c4102cf2e910563p@chr13:30259768..30259777, +
1.81e-54FFCP PHASE2:Hg19::chr5:167247119..167247129,+#_ca62414e80ff180e58648eff530f9cf4p@chr5:167247119..167247129, +
1.81e-54FFCP PHASE1:Hg19::chr5:167247119..167247129,+#_ca62414e80ff180e58648eff530f9cf4p@chr5:167247119..167247129, +
2.17e-54FFCP PHASE2:Hg19::chr5:52619638..52619641,+#_3c3008ff61cd34d166c7a8c088f3e4afp@chr5:52619638..52619641, +
2.17e-54FFCP PHASE2:Hg19::chr13:75017232..75017235,+#_3c3008ff61cd34d166c7a8c088f3e4afp@chr13:75017232..75017235, +
2.17e-54FFCP PHASE1:Hg19::chr13:75017232..75017235,+#_3c3008ff61cd34d166c7a8c088f3e4afp@chr13:75017232..75017235, +
2.17e-54FFCP PHASE1:Hg19::chr5:52619638..52619641,+#_3c3008ff61cd34d166c7a8c088f3e4afp@chr5:52619638..52619641, +
5.41e-54FFCP PHASE1:Hg19::chr11:129511955..129511961,-#_63ef71d91a3ed39634f12ac3effadb1bp@chr11:129511955..129511961, -
5.41e-54FFCP PHASE2:Hg19::chr11:129511955..129511961,-#_63ef71d91a3ed39634f12ac3effadb1bp@chr11:129511955..129511961, -
2.87e-53FFCP PHASE1:Hg19::chr1:183213228..183213235,+#_ca1111d0240acce4cc25c920ee8a4a77p@chr1:183213228..183213235, +
2.87e-53FFCP PHASE1:Hg19::chr3:52440350..52440361,-#_ca1111d0240acce4cc25c920ee8a4a77p@chr3:52440350..52440361, -
2.87e-53FFCP PHASE2:Hg19::chr3:52440350..52440361,-#_ca1111d0240acce4cc25c920ee8a4a77p@chr3:52440350..52440361, -
2.87e-53FFCP PHASE2:Hg19::chr1:183213228..183213235,+#_ca1111d0240acce4cc25c920ee8a4a77p@chr1:183213228..183213235, +
4.89e-53FFCP PHASE2:Hg19::chr10:5567644..5567657,+#_89181cade1d1bbabd928e84e18818e53p@chr10:5567644..5567657, +
4.89e-53FFCP PHASE1:Hg19::chr8:130798565..130798567,-#_89181cade1d1bbabd928e84e18818e53p4@GSDMC
4.89e-53FFCP PHASE2:Hg19::chr8:130798565..130798567,-#_89181cade1d1bbabd928e84e18818e53p4@GSDMC
4.89e-53FFCP PHASE1:Hg19::chr10:5567644..5567657,+#_89181cade1d1bbabd928e84e18818e53p@chr10:5567644..5567657, +
6.39e-53FFCP PHASE2:Hg19::chr17:73720330..73720338,+#_76533859e6563f49f34792c37a92378dp22@ITGB4
6.39e-53FFCP PHASE2:Hg19::chr10:106205503..106205518,+#_76533859e6563f49f34792c37a92378dp@chr10:106205503..106205518, +
6.39e-53FFCP PHASE1:Hg19::chr17:73720330..73720338,+#_76533859e6563f49f34792c37a92378dp22@ITGB4
6.39e-53FFCP PHASE1:Hg19::chr10:106205503..106205518,+#_76533859e6563f49f34792c37a92378dp@chr10:106205503..106205518, +
6.12e-50FFCP PHASE1:Hg19::chr19:10665857..10665900,-#_20984681ad033073002f4adfa043b672p@chr19:10665857..10665900, -
6.12e-50FFCP PHASE2:Hg19::chr19:10665857..10665900,-#_20984681ad033073002f4adfa043b672p@chr19:10665857..10665900, -
7.24e-50FFCP PHASE1:Hg19::chr11:392625..392628,+#_ca78ba20ef811991f3f7c2c4790891f8p13@PKP3
7.24e-50FFCP PHASE2:Hg19::chr11:392625..392628,+#_ca78ba20ef811991f3f7c2c4790891f8p13@PKP3
5.68e-46FFCP PHASE1:Hg19::chr12:116955659..116955671,+#_bebf315cee89f9b2ba7897a826c82ffep1@ENST00000552992
5.68e-46FFCP PHASE2:Hg19::chr12:116955659..116955671,+#_bebf315cee89f9b2ba7897a826c82ffep1@ENST00000552992
5.68e-46FFCP PHASE2:Hg19::chr2:231649545..231649550,-#_bebf315cee89f9b2ba7897a826c82ffep@chr2:231649545..231649550, -
5.68e-46FFCP PHASE1:Hg19::chr2:231649545..231649550,-#_bebf315cee89f9b2ba7897a826c82ffep@chr2:231649545..231649550, -
6.94e-44FFCP PHASE1:Hg19::chr11:13073062..13073067,+#_2ce8b05797594657b05abe8c85d62355p@chr11:13073062..13073067, +
6.94e-44FFCP PHASE2:Hg19::chr11:13073062..13073067,+#_2ce8b05797594657b05abe8c85d62355p@chr11:13073062..13073067, +
9.28e-44FFCP PHASE1:Hg19::chr6:29643393..29643442,-#_0bbc1dfd3b2e3e0ee719b498a812ec0fp@chr6:29643393..29643442, -
9.28e-44FFCP PHASE2:Hg19::chr6:29643393..29643442,-#_0bbc1dfd3b2e3e0ee719b498a812ec0fp@chr6:29643393..29643442, -
1.43e-43FFCP PHASE1:Hg19::chr8:105212349..105212367,+#_41a08f489ec67e4bdc51bf15dadfadafp@chr8:105212349..105212367, +
1.43e-43FFCP PHASE2:Hg19::chr8:105212349..105212367,+#_41a08f489ec67e4bdc51bf15dadfadafp@chr8:105212349..105212367, +
1.92e-43FFCP PHASE1:Hg19::chr11:93754316..93754353,+#_0147ab6a993a2ff5043cbbc9c74e9a7ep2@HEPHL1
1.92e-43FFCP PHASE2:Hg19::chr11:93754316..93754353,+#_0147ab6a993a2ff5043cbbc9c74e9a7ep2@HEPHL1
2.21e-43FFCP PHASE2:Hg19::chr21:44957855..44957891,-#_17693727e7f45d89034068379d4db3efp@chr21:44957855..44957891, -
2.21e-43FFCP PHASE1:Hg19::chr21:44957855..44957891,-#_17693727e7f45d89034068379d4db3efp@chr21:44957855..44957891, -
4.55e-43FFCP PHASE2:Hg19::chr9:34662651..34662656,-#_e1c8ee70731e8a0b757bf76264ccbeecp1@CCL27
4.55e-43FFCP PHASE1:Hg19::chr9:34662651..34662656,-#_e1c8ee70731e8a0b757bf76264ccbeecp1@CCL27
4.55e-43FFCP PHASE1:Hg19::chr2:43768420..43768427,-#_e1c8ee70731e8a0b757bf76264ccbeecp5@THADA
4.55e-43FFCP PHASE2:Hg19::chr2:43768420..43768427,-#_e1c8ee70731e8a0b757bf76264ccbeecp5@THADA
6.07e-43FFCP PHASE1:Hg19::chr18:9617195..9617198,-#_6e7ca856bd8b6a150bdf68aa06726eddp@chr18:9617195..9617198, -
6.07e-43FFCP PHASE2:Hg19::chr18:9617195..9617198,-#_6e7ca856bd8b6a150bdf68aa06726eddp@chr18:9617195..9617198, -
1.91e-42FFCP PHASE2:Hg19::chr1:153534027..153534037,+#_f5157360f1fa5d1474b9c8d1008d7edfp@chr1:153534027..153534037, +
1.91e-42FFCP PHASE1:Hg19::chr1:153534027..153534037,+#_f5157360f1fa5d1474b9c8d1008d7edfp@chr1:153534027..153534037, +
5.06e-41FFCP PHASE1:Hg19::chr7:40883521..40883532,+#_9fc2b20fa19b9f271d0ec458032c6bb8p@chr7:40883521..40883532, +
5.06e-41FFCP PHASE2:Hg19::chr7:40883521..40883532,+#_9fc2b20fa19b9f271d0ec458032c6bb8p@chr7:40883521..40883532, +
6.64e-41FFCP PHASE2:Hg19::chr3:149510368..149510386,-#_a67e2b70d6bdf7c078ad48b480fb2b71p5@ANKUB1
6.64e-41FFCP PHASE1:Hg19::chr3:149510368..149510386,-#_a67e2b70d6bdf7c078ad48b480fb2b71p5@ANKUB1
1.96e-40FFCP PHASE1:Hg19::chr1:183213300..183213316,+#_dd52b770ea5a1084a578284d179897cap@chr1:183213300..183213316, +
1.96e-40FFCP PHASE2:Hg19::chr1:183213300..183213316,+#_dd52b770ea5a1084a578284d179897cap@chr1:183213300..183213316, +
2.93e-40FFCP PHASE1:Hg19::chr5:52552639..52552656,-#_8e4bb96518fe82bed7c977286effc43dp@chr5:52552639..52552656, -
2.93e-40FFCP PHASE2:Hg19::chr5:52552639..52552656,-#_8e4bb96518fe82bed7c977286effc43dp@chr5:52552639..52552656, -
4.38e-40FFCP PHASE1:Hg19::chr4:15920326..15920338,+#_1566738bdfd79aae00f22b889bffe0c4p@chr4:15920326..15920338, +
4.38e-40FFCP PHASE1:Hg19::chrX:19692351..19692356,-#_1566738bdfd79aae00f22b889bffe0c4p@chrX:19692351..19692356, -
4.38e-40FFCP PHASE2:Hg19::chrX:19692351..19692356,-#_1566738bdfd79aae00f22b889bffe0c4p@chrX:19692351..19692356, -
4.38e-40FFCP PHASE2:Hg19::chr4:15920326..15920338,+#_1566738bdfd79aae00f22b889bffe0c4p@chr4:15920326..15920338, +
1.23e-38FFCP PHASE2:Hg19::chr2:69026957..69026966,+#_d2253dbfb08f8dd00f23e333a030b6ddp@chr2:69026957..69026966, +
1.23e-38FFCP PHASE1:Hg19::chr2:69026957..69026966,+#_d2253dbfb08f8dd00f23e333a030b6ddp@chr2:69026957..69026966, +
2.18e-38FFCP PHASE2:Hg19::chr7:56051493..56051514,+#_e878c269f24a5e2b2595d2963f4ea02dp@chr7:56051493..56051514, +
2.18e-38FFCP PHASE1:Hg19::chr7:56051493..56051514,+#_e878c269f24a5e2b2595d2963f4ea02dp@chr7:56051493..56051514, +
2.64e-38FFCP PHASE1:Hg19::chr7:41277861..41277905,+#_c983842231030f3e42634e70ae2a72f1p@chr7:41277861..41277905, +
2.64e-38FFCP PHASE1:Hg19::chr3:52099097..52099134,-#_c983842231030f3e42634e70ae2a72f1p1@C3orf74

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