Personal tools

UBERON:0002186

From FANTOM5_SSTAR

Jump to: navigation, search

Name:bronchiole
Definition:"the first airway branch that no longer contains cartilage; it is a branch of the bronchi[GO]." [Wikipedia:Bronchiole]
Xrefs:
links:

BTO:0002375
EHDAA:8171
EHDAA:8183
EHDAA:8199
EHDAA:8221
FMA:7410
[ Alveoli_diagram.png Alveoli_diagram.png]
[ 200px-Alveoli_diagram.png 200px-Alveoli_diagram.png]
MA:0000422
ncithesaurus:Bronchiole
OpenCyc:Mx4rvl9iDpwpEbGdrcN5Y29ycA
SCTID:278982001

VHOG:0000675
Synonyms: "bronchiolus" RELATED [BTO:0002375]
"lobular bronchiole" EXACT [FMA:7410]
Alt_id: UBERON:FMA_7410-MA_0000422
Subset: uberon_slim

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data

Parents

is_a:UBERON:0000072(segment of respiratory tract)
part_of:UBERON:0002048(lung),UBERON:0007196(tracheobronchial tree),UBERON:0010368(pulmonary lobule)



Children NA

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples
It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

  • 10708-109H6 (alveolar cell carcinoma cell line:SW 1573)
  • 10709-109H7 (bronchioalveolar carcinoma cell line:NCI-H358)
  • 10715-109I4 (bronchioalveolar carcinoma cell line:NCI-H650)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002186 (bronchiole), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data

P-valueFFCPShort description
1.55e-98FFCP PHASE2:Hg19::chr20:2779313..2779314,-#_8fc86289a9365c909ebaae19670ac0a6p16@CPXM1
1.55e-98FFCP PHASE2:Hg19::chr17:13574618..13574636,-#_8fc86289a9365c909ebaae19670ac0a6p@chr17:13574618..13574636, -
1.55e-98FFCP PHASE1:Hg19::chr20:2779140..2779150,-#_8fc86289a9365c909ebaae19670ac0a6p9@CPXM1
1.55e-98FFCP PHASE2:Hg19::chr16:11118533..11118538,+#_8fc86289a9365c909ebaae19670ac0a6p12@CLEC16A
1.55e-98FFCP PHASE1:Hg19::chr20:2779199..2779205,-#_8fc86289a9365c909ebaae19670ac0a6p13@CPXM1
1.55e-98FFCP PHASE2:Hg19::chr20:2779140..2779150,-#_8fc86289a9365c909ebaae19670ac0a6p9@CPXM1
1.55e-98FFCP PHASE1:Hg19::chr17:13574618..13574636,-#_8fc86289a9365c909ebaae19670ac0a6p@chr17:13574618..13574636, -
1.55e-98FFCP PHASE1:Hg19::chr6:137314390..137314394,-#_8fc86289a9365c909ebaae19670ac0a6p1@ENST00000418699, p1@ENST00000432330
1.55e-98FFCP PHASE2:Hg19::chr17:63511856..63511858,-#_8fc86289a9365c909ebaae19670ac0a6p@chr17:63511856..63511858, -
1.55e-98FFCP PHASE1:Hg19::chr7:63539651..63539654,+#_8fc86289a9365c909ebaae19670ac0a6p1@ENST00000430271
1.55e-98FFCP PHASE2:Hg19::chr14:36536932..36536937,-#_8fc86289a9365c909ebaae19670ac0a6p@chr14:36536932..36536937, -
1.55e-98FFCP PHASE1:Hg19::chr10:101690855..101690861,-#_8fc86289a9365c909ebaae19670ac0a6p14@DNMBP
1.55e-98FFCP PHASE2:Hg19::chrX:48056224..48056233,-#_8fc86289a9365c909ebaae19670ac0a6p1@SSX5
1.55e-98FFCP PHASE1:Hg19::chrX:48056224..48056233,-#_8fc86289a9365c909ebaae19670ac0a6p1@SSX5
1.55e-98FFCP PHASE1:Hg19::chr20:2779236..2779242,-#_8fc86289a9365c909ebaae19670ac0a6p12@CPXM1
1.55e-98FFCP PHASE2:Hg19::chr20:2779199..2779205,-#_8fc86289a9365c909ebaae19670ac0a6p13@CPXM1
1.55e-98FFCP PHASE2:Hg19::chr10:101690855..101690861,-#_8fc86289a9365c909ebaae19670ac0a6p14@DNMBP
1.55e-98FFCP PHASE2:Hg19::chr6:137314390..137314394,-#_8fc86289a9365c909ebaae19670ac0a6p1@ENST00000418699, p1@ENST00000432330
1.55e-98FFCP PHASE1:Hg19::chr10:101691056..101691064,-#_8fc86289a9365c909ebaae19670ac0a6p13@DNMBP
1.55e-98FFCP PHASE1:Hg19::chr3:87647430..87647437,-#_8fc86289a9365c909ebaae19670ac0a6p@chr3:87647430..87647437, -
1.55e-98FFCP PHASE1:Hg19::chr14:36536932..36536937,-#_8fc86289a9365c909ebaae19670ac0a6-, p@chr14:36536932..36536937
1.55e-98FFCP PHASE1:Hg19::chr20:2779313..2779314,-#_8fc86289a9365c909ebaae19670ac0a6p16@CPXM1
1.55e-98FFCP PHASE2:Hg19::chr20:2779236..2779242,-#_8fc86289a9365c909ebaae19670ac0a6p12@CPXM1
1.55e-98FFCP PHASE2:Hg19::chr7:63539651..63539654,+#_8fc86289a9365c909ebaae19670ac0a6p1@ENST00000430271
1.55e-98FFCP PHASE2:Hg19::chr3:87647430..87647437,-#_8fc86289a9365c909ebaae19670ac0a6p@chr3:87647430..87647437, -
1.55e-98FFCP PHASE1:Hg19::chr17:63511856..63511858,-#_8fc86289a9365c909ebaae19670ac0a6p@chr17:63511856..63511858, -
1.55e-98FFCP PHASE2:Hg19::chr10:101691056..101691064,-#_8fc86289a9365c909ebaae19670ac0a6p13@DNMBP
1.55e-98FFCP PHASE1:Hg19::chr16:11118533..11118538,+#_8fc86289a9365c909ebaae19670ac0a6p12@CLEC16A
3.96e-66FFCP PHASE2:Hg19::chr2:191696381..191696384,-#_0a4f469b4a940960cfb6e4c83a863600p@chr2:191696381..191696384, -
3.96e-66FFCP PHASE1:Hg19::chr2:191696381..191696384,-#_0a4f469b4a940960cfb6e4c83a863600p@chr2:191696381..191696384, -
2.74e-50FFCP PHASE2:Hg19::chr9:140350189..140350212,-#_e9b9dff45c9c6e71b878d1a92b0a912cp30@NELF
2.74e-50FFCP PHASE1:Hg19::chr9:140350189..140350212,-#_e9b9dff45c9c6e71b878d1a92b0a912cp30@NELF
2.74e-50FFCP PHASE1:Hg19::chr11:106266838..106266843,+#_e9b9dff45c9c6e71b878d1a92b0a912c+, p@chr11:106266838..106266843
2.74e-50FFCP PHASE1:Hg19::chr10:101691101..101691115,-#_e9b9dff45c9c6e71b878d1a92b0a912cp7@DNMBP
2.74e-50FFCP PHASE2:Hg19::chr8:122157279..122157284,-#_e9b9dff45c9c6e71b878d1a92b0a912cp@chr8:122157279..122157284, -
2.74e-50FFCP PHASE1:Hg19::chr11:41809203..41809208,-#_e9b9dff45c9c6e71b878d1a92b0a912c-, p@chr11:41809203..41809208
2.74e-50FFCP PHASE2:Hg19::chr10:101691101..101691115,-#_e9b9dff45c9c6e71b878d1a92b0a912cp7@DNMBP
2.74e-50FFCP PHASE1:Hg19::chr4:169956294..169956301,-#_e9b9dff45c9c6e71b878d1a92b0a912cp@chr4:169956294..169956301, -
2.74e-50FFCP PHASE1:Hg19::chr8:122157279..122157284,-#_e9b9dff45c9c6e71b878d1a92b0a912c-, p@chr8:122157279..122157284
2.74e-50FFCP PHASE2:Hg19::chr11:104005546..104005596,-#_e9b9dff45c9c6e71b878d1a92b0a912cp@chr11:104005546..104005596, -
2.74e-50FFCP PHASE1:Hg19::chr8:94870047..94870056,+#_e9b9dff45c9c6e71b878d1a92b0a912cp30@PDP1
2.74e-50FFCP PHASE1:Hg19::chr10:101691199..101691208,-#_e9b9dff45c9c6e71b878d1a92b0a912cp11@DNMBP
2.74e-50FFCP PHASE1:Hg19::chr9:103785643..103785646,-#_e9b9dff45c9c6e71b878d1a92b0a912cp@chr9:103785643..103785646, -
2.74e-50FFCP PHASE2:Hg19::chrX:147062891..147062896,+#_e9b9dff45c9c6e71b878d1a92b0a912cp3@FMR1NB
2.74e-50FFCP PHASE2:Hg19::chr11:106266838..106266843,+#_e9b9dff45c9c6e71b878d1a92b0a912cp@chr11:106266838..106266843, +
2.74e-50FFCP PHASE2:Hg19::chr10:101691199..101691208,-#_e9b9dff45c9c6e71b878d1a92b0a912cp11@DNMBP
2.74e-50FFCP PHASE2:Hg19::chr11:41809203..41809208,-#_e9b9dff45c9c6e71b878d1a92b0a912cp@chr11:41809203..41809208, -
2.74e-50FFCP PHASE2:Hg19::chr8:94870047..94870056,+#_e9b9dff45c9c6e71b878d1a92b0a912cp30@PDP1
2.74e-50FFCP PHASE1:Hg19::chrX:147062891..147062896,+#_e9b9dff45c9c6e71b878d1a92b0a912cp3@FMR1NB
2.74e-50FFCP PHASE2:Hg19::chr4:169956294..169956301,-#_e9b9dff45c9c6e71b878d1a92b0a912c-, p@chr4:169956294..169956301
2.74e-50FFCP PHASE1:Hg19::chr11:104005546..104005596,-#_e9b9dff45c9c6e71b878d1a92b0a912cp@chr11:104005546..104005596, -
2.74e-50FFCP PHASE2:Hg19::chr9:103785643..103785646,-#_e9b9dff45c9c6e71b878d1a92b0a912cp@chr9:103785643..103785646, -
4.52e-50FFCP PHASE1:Hg19::chr1:119837700..119837705,+#_732659288d1d69bd3277cd963347a12fp@chr1:119837700..119837705, +
4.52e-50FFCP PHASE1:Hg19::chr17:63533845..63533851,-#_732659288d1d69bd3277cd963347a12fp@chr17:63533845..63533851, -
4.52e-50FFCP PHASE2:Hg19::chr6:45405393..45405412,+#_732659288d1d69bd3277cd963347a12f+, p@chr6:45405393..45405412
4.52e-50FFCP PHASE1:Hg19::chr6:45405332..45405343,+#_732659288d1d69bd3277cd963347a12fp@chr6:45405332..45405343, +
4.52e-50FFCP PHASE2:Hg19::chr2:118846114..118846125,+#_732659288d1d69bd3277cd963347a12fp6@INSIG2
4.52e-50FFCP PHASE2:Hg19::chr6:45399533..45399540,+#_732659288d1d69bd3277cd963347a12fp@chr6:45399533..45399540, +
4.52e-50FFCP PHASE1:Hg19::chr20:2795718..2795731,+#_732659288d1d69bd3277cd963347a12fp5@C20orf141
4.52e-50FFCP PHASE1:Hg19::chr15:55806847..55806854,-#_732659288d1d69bd3277cd963347a12fp@chr15:55806847..55806854, -
4.52e-50FFCP PHASE1:Hg19::chr6:141743015..141743025,+#_732659288d1d69bd3277cd963347a12fp@chr6:141743015..141743025, +
4.52e-50FFCP PHASE1:Hg19::chr6:45405393..45405412,+#_732659288d1d69bd3277cd963347a12fp@chr6:45405393..45405412, +
4.52e-50FFCP PHASE1:Hg19::chr12:65386452..65386492,-#_732659288d1d69bd3277cd963347a12fp@chr12:65386452..65386492, -
4.52e-50FFCP PHASE2:Hg19::chr15:55806847..55806854,-#_732659288d1d69bd3277cd963347a12fp@chr15:55806847..55806854, -
4.52e-50FFCP PHASE2:Hg19::chr6:45399245..45399258,+#_732659288d1d69bd3277cd963347a12fp@chr6:45399245..45399258, +
4.52e-50FFCP PHASE1:Hg19::chr6:169691363..169691375,-#_732659288d1d69bd3277cd963347a12fp@chr6:169691363..169691375, -
4.52e-50FFCP PHASE1:Hg19::chr3:139035972..139036016,-#_732659288d1d69bd3277cd963347a12fp@chr3:139035972..139036016, -
4.52e-50FFCP PHASE2:Hg19::chr6:46985426..46985427,-#_732659288d1d69bd3277cd963347a12fp@chr6:46985426..46985427, -
4.52e-50FFCP PHASE2:Hg19::chr12:65386452..65386492,-#_732659288d1d69bd3277cd963347a12fp@chr12:65386452..65386492, -
4.52e-50FFCP PHASE1:Hg19::chr6:45399533..45399540,+#_732659288d1d69bd3277cd963347a12fp@chr6:45399533..45399540, +
4.52e-50FFCP PHASE2:Hg19::chr1:119837700..119837705,+#_732659288d1d69bd3277cd963347a12fp@chr1:119837700..119837705, +
4.52e-50FFCP PHASE2:Hg19::chr20:2795718..2795731,+#_732659288d1d69bd3277cd963347a12fp5@C20orf141
4.52e-50FFCP PHASE1:Hg19::chr4:171012844..171012850,-#_732659288d1d69bd3277cd963347a12fp12@AADAT
4.52e-50FFCP PHASE2:Hg19::chr6:169691363..169691375,-#_732659288d1d69bd3277cd963347a12fp@chr6:169691363..169691375, -
4.52e-50FFCP PHASE2:Hg19::chr6:141743015..141743025,+#_732659288d1d69bd3277cd963347a12fp@chr6:141743015..141743025, +
4.52e-50FFCP PHASE2:Hg19::chr3:139035972..139036016,-#_732659288d1d69bd3277cd963347a12fp@chr3:139035972..139036016, -
4.52e-50FFCP PHASE1:Hg19::chr6:45399245..45399258,+#_732659288d1d69bd3277cd963347a12fp@chr6:45399245..45399258, +
4.52e-50FFCP PHASE2:Hg19::chr6:45399263..45399274,+#_732659288d1d69bd3277cd963347a12fp@chr6:45399263..45399274, +
4.52e-50FFCP PHASE2:Hg19::chr9:140349856..140349859,-#_732659288d1d69bd3277cd963347a12fp36@NELF
4.52e-50FFCP PHASE2:Hg19::chr17:63533845..63533851,-#_732659288d1d69bd3277cd963347a12fp@chr17:63533845..63533851, -
4.52e-50FFCP PHASE1:Hg19::chr6:46985426..46985427,-#_732659288d1d69bd3277cd963347a12fp@chr6:46985426..46985427, -
4.52e-50FFCP PHASE1:Hg19::chr9:140349856..140349859,-#_732659288d1d69bd3277cd963347a12fp36@NELF
4.52e-50FFCP PHASE1:Hg19::chr2:118846114..118846125,+#_732659288d1d69bd3277cd963347a12fp6@INSIG2
4.52e-50FFCP PHASE1:Hg19::chr6:45399263..45399274,+#_732659288d1d69bd3277cd963347a12fp@chr6:45399263..45399274, +
4.52e-50FFCP PHASE2:Hg19::chr6:45399294..45399301,+#_732659288d1d69bd3277cd963347a12fp@chr6:45399294..45399301, +
4.52e-50FFCP PHASE2:Hg19::chr4:171012844..171012850,-#_732659288d1d69bd3277cd963347a12fp12@AADAT
4.52e-50FFCP PHASE2:Hg19::chr9:140349915..140349924,-#_732659288d1d69bd3277cd963347a12fp34@NELF
4.52e-50FFCP PHASE2:Hg19::chr6:45405332..45405343,+#_732659288d1d69bd3277cd963347a12fp@chr6:45405332..45405343, +
4.52e-50FFCP PHASE1:Hg19::chr1:93054640..93054674,-#_732659288d1d69bd3277cd963347a12fp@chr1:93054640..93054674, -
4.52e-50FFCP PHASE1:Hg19::chr9:140349915..140349924,-#_732659288d1d69bd3277cd963347a12fp34@NELF
4.52e-50FFCP PHASE2:Hg19::chr1:93054640..93054674,-#_732659288d1d69bd3277cd963347a12fp@chr1:93054640..93054674, -
4.52e-50FFCP PHASE1:Hg19::chr6:45399294..45399301,+#_732659288d1d69bd3277cd963347a12fp@chr6:45399294..45399301, +
4.0e-45FFCP PHASE1:Hg19::chr2:75751179..75751194,+#_845ad0ec7f0990b002df16ced783738bp1@BC018659
4.0e-45FFCP PHASE2:Hg19::chr2:75751179..75751194,+#_845ad0ec7f0990b002df16ced783738bp1@BC018659
1.1e-40FFCP PHASE2:Hg19::chr14:29047235..29047244,+#_7e1ea77f143ea439d91d397854355a64+, p@chr14:29047235..29047244
1.1e-40FFCP PHASE1:Hg19::chr14:29047235..29047244,+#_7e1ea77f143ea439d91d397854355a64p@chr14:29047235..29047244, +
3.61e-34FFCP PHASE2:Hg19::chr1:87994589..87994604,-#_ecbc8ade8c37604a268d3f3decfb16b6p@chr1:87994589..87994604, -
3.61e-34FFCP PHASE2:Hg19::chr5:81683619..81683623,+#_ecbc8ade8c37604a268d3f3decfb16b6p@chr5:81683619..81683623, +
3.61e-34FFCP PHASE2:Hg19::chr8:144260966..144260967,-#_ecbc8ade8c37604a268d3f3decfb16b6p@chr8:144260966..144260967, -
3.61e-34FFCP PHASE2:Hg19::chr13:70823810..70823813,+#_ecbc8ade8c37604a268d3f3decfb16b6p@chr13:70823810..70823813, +

Retrieved from "http://f5-webapp2.gsc.riken.jp/5/sstar/index.php?title=UBERON:0002186&oldid=1837561"