UBERON:0002546
From FANTOM5_SSTAR
Name: | cranial placode | ||
---|---|---|---|
Namespace: | FANTOM | ||
Definition: | "Ectodermal placode that develops in the head into a part of the sensory nervous system. With a few exceptions (lens, adenohypophyseal), cranial placodes are neurogenic" https://github.com/seger/aao/issues/4, UBERON:cjm | ||
Xrefs: |
| ||
Synonyms: | "placode" BROAD [Wikipedia:Placode] | ||
Comments: | Editor note: to avoid confusion, we include neurogenic placode as a subclass. Do not merge. Terminological notes: The term placode or placodes also applies to developing organs such as teeth, mammary glands, hair follicles, feathers and scales. We include a separate parent class for this. Taxon notes: Comparisons of developmental gene expression suggest that the anterior ectoderm in amphioxus may be homologous to the vertebrate olfactory placode, the only vertebrate placode with primary, not secondary, neurons[PMID:11523831]. | ||
Alt_id: | UBERON:MIAA_0000369-XAO_0000305 |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0005085(ectodermal placode) |
---|---|
part_of: | UBERON:0000033(head) |
Children
is a: | UBERON:0003073 (lens placode),UBERON:0009122 (adenohypophyseal placode),UBERON:0009955 (neurogenic placode) |
---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002546 (cranial placode), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
P-value | FFCP | Short description |
---|---|---|
1.41e-88 | FFCP PHASE1:Hg19::chr22:25595823..25595826,+#_d7408ddd600950bd0d37a333082a72a5 | p1@CRYBB3 |
1.41e-88 | FFCP PHASE2:Hg19::chr22:25595823..25595826,+#_d7408ddd600950bd0d37a333082a72a5 | p1@CRYBB3 |
1.87e-86 | FFCP PHASE1:Mm9::chr4:154208086..154208123,+#_e751c663870c04b3e9be3a6d17109921 | p@chr4:154208086..154208123, + |
1.87e-86 | FFCP PHASE1:Mm9::chr8:13414289..13414295,+#_e751c663870c04b3e9be3a6d17109921 | p@chr8:13414289..13414295, + |
1.87e-86 | FFCP PHASE2:Mm9::chr10:107156949..107156956,-#_e751c663870c04b3e9be3a6d17109921 | p3@Ptprq |
1.87e-86 | FFCP PHASE1:Mm9::chr5:144115382..144115389,+#_e751c663870c04b3e9be3a6d17109921 | p@chr5:144115382..144115389, + |
1.87e-86 | FFCP PHASE1:Mm9::chr12:13508015..13508019,+#_e751c663870c04b3e9be3a6d17109921 | p@chr12:13508015..13508019, + |
1.87e-86 | FFCP PHASE2:Mm9::chr15:58480061..58480066,+#_e751c663870c04b3e9be3a6d17109921 | p5@Fer1l6 |
1.87e-86 | FFCP PHASE1:Mm9::chr10:67371994..67372010,+#_e751c663870c04b3e9be3a6d17109921 | p@chr10:67371994..67372010, + |
1.87e-86 | FFCP PHASE1:Mm9::chr16:93971325..93971337,-#_e751c663870c04b3e9be3a6d17109921 | p@chr16:93971325..93971337, - |
1.87e-86 | FFCP PHASE1:Mm9::chr14:63099970..63099980,-#_e751c663870c04b3e9be3a6d17109921 | p@chr14:63099970..63099980, - |
1.87e-86 | FFCP PHASE1:Mm9::chr19:10536797..10536802,-#_e751c663870c04b3e9be3a6d17109921 | p@chr19:10536797..10536802, - |
1.87e-86 | FFCP PHASE2:Mm9::chr11:114603036..114603048,+#_e751c663870c04b3e9be3a6d17109921 | p@chr11:114603036..114603048, + |
1.87e-86 | FFCP PHASE1:Mm9::chr17:31335869..31335899,-#_e751c663870c04b3e9be3a6d17109921 | p1@Tmprss3 |
1.87e-86 | FFCP PHASE2:Mm9::chr1:172843813..172843834,-#_e751c663870c04b3e9be3a6d17109921 | p@chr1:172843813..172843834, - |
1.87e-86 | FFCP PHASE2:Mm9::chr4:63079735..63079745,-#_e751c663870c04b3e9be3a6d17109921 | p@chr4:63079735..63079745, - |
1.87e-86 | FFCP PHASE2:Mm9::chr2:121206695..121206711,-#_e751c663870c04b3e9be3a6d17109921 | p1@Strc |
1.87e-86 | FFCP PHASE1:Mm9::chr7:139597684..139597691,+#_e751c663870c04b3e9be3a6d17109921 | p@chr7:139597684..139597691, + |
1.87e-86 | FFCP PHASE1:Mm9::chr14:47293487..47293493,-#_e751c663870c04b3e9be3a6d17109921 | p@chr14:47293487..47293493, - |
1.87e-86 | FFCP PHASE2:Mm9::chr9:42207887..42207960,-#_e751c663870c04b3e9be3a6d17109921 | p1@Tecta |
1.87e-86 | FFCP PHASE1:Mm9::chr5:72652660..72652667,+#_e751c663870c04b3e9be3a6d17109921 | p@chr5:72652660..72652667, + |
1.87e-86 | FFCP PHASE1:Mm9::chr1:43454162..43454170,-#_e751c663870c04b3e9be3a6d17109921 | p@chr1:43454162..43454170, - |
1.87e-86 | FFCP PHASE2:Mm9::chr13:76964459..76964469,+#_e751c663870c04b3e9be3a6d17109921 | p15@Mctp1 |
1.87e-86 | FFCP PHASE1:Mm9::chr2:73232344..73232356,-#_e751c663870c04b3e9be3a6d17109921 | p@chr2:73232344..73232356, - |
1.87e-86 | FFCP PHASE1:Mm9::chr7:53496326..53496340,+#_e751c663870c04b3e9be3a6d17109921 | p1@Otog |
1.87e-86 | FFCP PHASE2:Mm9::chr11:102123535..102123544,+#_e751c663870c04b3e9be3a6d17109921 | p5@BC030867 |
1.87e-86 | FFCP PHASE2:Mm9::chr5:30710455..30710464,-#_e751c663870c04b3e9be3a6d17109921 | p9@Otof |
1.87e-86 | FFCP PHASE1:Mm9::chr13:76964459..76964469,+#_e751c663870c04b3e9be3a6d17109921 | p15@Mctp1 |
1.87e-86 | FFCP PHASE1:Mm9::chr3:31585340..31585360,+#_e751c663870c04b3e9be3a6d17109921 | p@chr3:31585340..31585360, + |
1.87e-86 | FFCP PHASE2:Mm9::chr14:20649897..20649907,+#_e751c663870c04b3e9be3a6d17109921 | p@chr14:20649897..20649907, + |
1.87e-86 | FFCP PHASE2:Mm9::chr16:45693840..45693856,-#_e751c663870c04b3e9be3a6d17109921 | p1@Tmprss7 |
1.87e-86 | FFCP PHASE2:Mm9::chr17:31335869..31335899,-#_e751c663870c04b3e9be3a6d17109921 | p1@Tmprss3 |
1.87e-86 | FFCP PHASE1:Mm9::chr2:170417150..170417155,-#_e751c663870c04b3e9be3a6d17109921 | p@chr2:170417150..170417155, - |
1.87e-86 | FFCP PHASE2:Mm9::chr9:42206745..42206774,-#_e751c663870c04b3e9be3a6d17109921 | p@chr9:42206745..42206774, - |
1.87e-86 | FFCP PHASE1:Mm9::chr5:30710455..30710464,-#_e751c663870c04b3e9be3a6d17109921 | p9@Otof |
1.87e-86 | FFCP PHASE1:Mm9::chr1:182528388..182528403,+#_e751c663870c04b3e9be3a6d17109921 | p@chr1:182528388..182528403, + |
1.87e-86 | FFCP PHASE2:Mm9::chr3:154459184..154459195,+#_e751c663870c04b3e9be3a6d17109921 | p@chr3:154459184..154459195, + |
1.87e-86 | FFCP PHASE1:Mm9::chr18:66033526..66033539,-#_e751c663870c04b3e9be3a6d17109921 | p@chr18:66033526..66033539, - |
1.87e-86 | FFCP PHASE2:Mm9::chr7:53496326..53496340,+#_e751c663870c04b3e9be3a6d17109921 | p1@Otog |
1.87e-86 | FFCP PHASE2:Mm9::chr15:89215306..89215315,+#_e751c663870c04b3e9be3a6d17109921 | p@chr15:89215306..89215315, + |
1.87e-86 | FFCP PHASE2:Mm9::chr10:107349392..107349413,-#_e751c663870c04b3e9be3a6d17109921 | p2@Otogl |
1.87e-86 | FFCP PHASE2:Mm9::chr4:151505798..151505818,-#_e751c663870c04b3e9be3a6d17109921 | p21@Espn |
1.87e-86 | FFCP PHASE1:Mm9::chr10:107349430..107349440,-#_e751c663870c04b3e9be3a6d17109921 | p3@Otogl |
1.87e-86 | FFCP PHASE2:Mm9::chr5:68423014..68423037,+#_e751c663870c04b3e9be3a6d17109921 | p1@Grxcr1 |
1.87e-86 | FFCP PHASE1:Mm9::chr2:14685072..14685084,+#_e751c663870c04b3e9be3a6d17109921 | p41@Cacnb2 |
1.87e-86 | FFCP PHASE2:Mm9::chr17:13983102..13983126,+#_e751c663870c04b3e9be3a6d17109921 | p@chr17:13983102..13983126, + |
1.87e-86 | FFCP PHASE1:Mm9::chr1:172843796..172843799,-#_e751c663870c04b3e9be3a6d17109921 | p@chr1:172843796..172843799, - |
1.87e-86 | FFCP PHASE1:Mm9::chr4:115556989..115556997,+#_e751c663870c04b3e9be3a6d17109921 | p1@Kncn |
1.87e-86 | FFCP PHASE2:Mm9::chr2:67011921..67011934,+#_e751c663870c04b3e9be3a6d17109921 | p2@Gm1322 |
1.87e-86 | FFCP PHASE2:Mm9::chr5:3909290..3909299,+#_e751c663870c04b3e9be3a6d17109921 | p@chr5:3909290..3909299, + |
1.87e-86 | FFCP PHASE2:Mm9::chr13:78322370..78322376,-#_e751c663870c04b3e9be3a6d17109921 | p4@uc007rhb.1 |
1.87e-86 | FFCP PHASE1:Mm9::chr9:42207998..42208009,-#_e751c663870c04b3e9be3a6d17109921 | p6@Tecta |
1.87e-86 | FFCP PHASE2:Mm9::chr3:69811606..69811616,+#_e751c663870c04b3e9be3a6d17109921 | p2@Otol1 |
1.87e-86 | FFCP PHASE1:Mm9::chr8:125802236..125802251,-#_e751c663870c04b3e9be3a6d17109921 | p3@Fanca |
1.87e-86 | FFCP PHASE1:Mm9::chr11:8405038..8405048,-#_e751c663870c04b3e9be3a6d17109921 | p@chr11:8405038..8405048, - |
1.87e-86 | FFCP PHASE2:Mm9::chr10:80806047..80806059,-#_e751c663870c04b3e9be3a6d17109921 | p4@Gipc3 |
1.87e-86 | FFCP PHASE2:Mm9::chr1:93235253..93235264,+#_e751c663870c04b3e9be3a6d17109921 | p@chr1:93235253..93235264, + |
1.87e-86 | FFCP PHASE2:Mm9::chr6:30619443..30619450,-#_e751c663870c04b3e9be3a6d17109921 | p13@Tsga14 |
1.87e-86 | FFCP PHASE1:Mm9::chr12:109905468..109905474,+#_e751c663870c04b3e9be3a6d17109921 | p@chr12:109905468..109905474, + |
1.87e-86 | FFCP PHASE1:Mm9::chr16:45693840..45693856,-#_e751c663870c04b3e9be3a6d17109921 | p1@Tmprss7 |
1.87e-86 | FFCP PHASE1:Mm9::chr7:141605556..141605563,-#_e751c663870c04b3e9be3a6d17109921 | p@chr7:141605556..141605563, - |
1.87e-86 | FFCP PHASE2:Mm9::chr9:42208142..42208157,-#_e751c663870c04b3e9be3a6d17109921 | p10@Tecta |
1.87e-86 | FFCP PHASE1:Mm9::chr6:113251570..113251578,+#_e751c663870c04b3e9be3a6d17109921 | p@chr6:113251570..113251578, + |
1.87e-86 | FFCP PHASE1:Mm9::chr17:27252925..27252939,+#_e751c663870c04b3e9be3a6d17109921 | p@chr17:27252925..27252939, + |
1.87e-86 | FFCP PHASE1:Mm9::chr2:121206667..121206674,-#_e751c663870c04b3e9be3a6d17109921 | p2@Strc |
1.87e-86 | FFCP PHASE1:Mm9::chr13:78322383..78322395,-#_e751c663870c04b3e9be3a6d17109921 | p2@uc007rhb.1 |
1.87e-86 | FFCP PHASE2:Mm9::chr4:130461150..130461185,+#_e751c663870c04b3e9be3a6d17109921 | p@chr4:130461150..130461185, + |
1.87e-86 | FFCP PHASE1:Mm9::chr9:92087926..92087938,+#_e751c663870c04b3e9be3a6d17109921 | p2@Plscr5 |
1.87e-86 | FFCP PHASE2:Mm9::chr8:13414289..13414295,+#_e751c663870c04b3e9be3a6d17109921 | p@chr8:13414289..13414295, + |
1.87e-86 | FFCP PHASE2:Mm9::chr19:55255206..55255223,+#_e751c663870c04b3e9be3a6d17109921 | p1@Tectb |
1.87e-86 | FFCP PHASE2:Mm9::chr9:42207777..42207789,-#_e751c663870c04b3e9be3a6d17109921 | p7@Tecta |
1.87e-86 | FFCP PHASE1:Mm9::chr18:81327205..81327211,+#_e751c663870c04b3e9be3a6d17109921 | p@chr18:81327205..81327211, + |
1.87e-86 | FFCP PHASE2:Mm9::chr11:120222470..120222516,+#_e751c663870c04b3e9be3a6d17109921 | p2@Fscn2 |
1.87e-86 | FFCP PHASE1:Mm9::chr9:42207397..42207408,-#_e751c663870c04b3e9be3a6d17109921 | p@chr9:42207397..42207408, - |
1.87e-86 | FFCP PHASE1:Mm9::chr17:13983160..13983167,+#_e751c663870c04b3e9be3a6d17109921 | p@chr17:13983160..13983167, + |
1.87e-86 | FFCP PHASE1:Mm9::chr6:30619443..30619450,-#_e751c663870c04b3e9be3a6d17109921 | p13@Tsga14 |
1.87e-86 | FFCP PHASE2:Mm9::chr1:154246932..154246939,+#_e751c663870c04b3e9be3a6d17109921 | p7@Glt25d2 |
1.87e-86 | FFCP PHASE1:Mm9::chr3:154459231..154459240,+#_e751c663870c04b3e9be3a6d17109921 | p@chr3:154459231..154459240, + |
1.87e-86 | FFCP PHASE2:Mm9::chr10:108316802..108316807,-#_e751c663870c04b3e9be3a6d17109921 | p@chr10:108316802..108316807, - |
1.87e-86 | FFCP PHASE1:Mm9::chr15:89215319..89215330,+#_e751c663870c04b3e9be3a6d17109921 | p@chr15:89215319..89215330, + |
1.87e-86 | FFCP PHASE2:Mm9::chr2:53464168..53464175,+#_e751c663870c04b3e9be3a6d17109921 | p@chr2:53464168..53464175, + |
1.87e-86 | FFCP PHASE2:Mm9::chr4:115556989..115556997,+#_e751c663870c04b3e9be3a6d17109921 | p1@Kncn |
1.87e-86 | FFCP PHASE2:Mm9::chr14:47293487..47293493,-#_e751c663870c04b3e9be3a6d17109921 | p@chr14:47293487..47293493, - |
1.87e-86 | FFCP PHASE2:Mm9::chr10:81091447..81091464,+#_e751c663870c04b3e9be3a6d17109921 | p9@Ankrd24 |
1.87e-86 | FFCP PHASE1:Mm9::chr18:59222033..59222043,+#_e751c663870c04b3e9be3a6d17109921 | p7@A730017C20Rik |
1.87e-86 | FFCP PHASE1:Mm9::chr12:77084875..77084885,+#_e751c663870c04b3e9be3a6d17109921 | p@chr12:77084875..77084885, + |
1.87e-86 | FFCP PHASE1:Mm9::chr2:67011956..67011967,+#_e751c663870c04b3e9be3a6d17109921 | p1@Gm1322 |
1.87e-86 | FFCP PHASE1:Mm9::chr1:93218682..93218691,+#_e751c663870c04b3e9be3a6d17109921 | p2@Espnl |
1.87e-86 | FFCP PHASE1:Mm9::chr13:37195838..37195870,-#_e751c663870c04b3e9be3a6d17109921 | p@chr13:37195838..37195870, - |
1.87e-86 | FFCP PHASE1:Mm9::chr11:11599532..11599539,-#_e751c663870c04b3e9be3a6d17109921 | p@chr11:11599532..11599539, - |
1.87e-86 | FFCP PHASE1:Mm9::chr8:13425469..13425503,+#_e751c663870c04b3e9be3a6d17109921 | p@chr8:13425469..13425503, + |
1.87e-86 | FFCP PHASE1:Mm9::chr6:86745686..86745727,-#_e751c663870c04b3e9be3a6d17109921 | p@chr6:86745686..86745727, - |
1.87e-86 | FFCP PHASE1:Mm9::chr10:107349309..107349318,-#_e751c663870c04b3e9be3a6d17109921 | p4@Otogl |
1.87e-86 | FFCP PHASE1:Mm9::chr2:136942131..136942142,-#_e751c663870c04b3e9be3a6d17109921 | p6@Jag1 |
1.87e-86 | FFCP PHASE2:Mm9::chr2:9811162..9811171,-#_e751c663870c04b3e9be3a6d17109921 | p2@9230102O04Rik |
1.87e-86 | FFCP PHASE1:Mm9::chr14:102297728..102297742,+#_e751c663870c04b3e9be3a6d17109921 | p@chr14:102297728..102297742, + |
1.87e-86 | FFCP PHASE2:Mm9::chr1:94627290..94627299,-#_e751c663870c04b3e9be3a6d17109921 | p@chr1:94627290..94627299, - |
1.87e-86 | FFCP PHASE1:Mm9::chr12:13508046..13508055,+#_e751c663870c04b3e9be3a6d17109921 | p@chr12:13508046..13508055, + |
1.87e-86 | FFCP PHASE2:Mm9::chr3:58626291..58626298,-#_e751c663870c04b3e9be3a6d17109921 | p@chr3:58626291..58626298, - |
1.87e-86 | FFCP PHASE1:Mm9::chr16:93971357..93971363,-#_e751c663870c04b3e9be3a6d17109921 | p@chr16:93971357..93971363, - |