UBERON:0002784
From FANTOM5_SSTAR
| Name: | regional part of diencephalon | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A regional part of brain that is part of a diencephalon [Obol]." [OBOL:automatic] | ||
| Xrefs: |
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| Synonyms: |
"anatomical structure of brain of between brain" EXACT [OBOL:automatic] "anatomical structure of brain of diencephalon" EXACT [OBOL:automatic] "anatomical structure of brain of interbrain" EXACT [OBOL:automatic] "anatomical structure of brain of mature diencephalon" EXACT [OBOL:automatic] "between brain anatomical structure of brain" EXACT [OBOL:automatic] "between brain biological structure of brain" EXACT [OBOL:automatic] "between brain brain anatomical structure" EXACT [OBOL:automatic] "between brain brain biological structure" EXACT [OBOL:automatic] "between brain neuraxis segment" EXACT [OBOL:automatic] "between brain regional part of brain" EXACT [OBOL:automatic] "between brain segment of brain" EXACT [OBOL:automatic] "biological structure of brain of between brain" EXACT [OBOL:automatic] "biological structure of brain of diencephalon" EXACT [OBOL:automatic] "biological structure of brain of interbrain" EXACT [OBOL:automatic] "biological structure of brain of mature diencephalon" EXACT [OBOL:automatic] "brain anatomical structure of between brain" EXACT [OBOL:automatic] "brain anatomical structure of diencephalon" EXACT [OBOL:automatic] "brain anatomical structure of interbrain" EXACT [OBOL:automatic] "brain anatomical structure of mature diencephalon" EXACT [OBOL:automatic] "brain biological structure of between brain" EXACT [OBOL:automatic] "brain biological structure of diencephalon" EXACT [OBOL:automatic] "brain biological structure of interbrain" EXACT [OBOL:automatic] "brain biological structure of mature diencephalon" EXACT [OBOL:automatic] "diencephalon anatomical structure of brain" EXACT [OBOL:automatic] "diencephalon biological structure of brain" EXACT [OBOL:automatic] "diencephalon brain anatomical structure" EXACT [OBOL:automatic] "diencephalon brain biological structure" EXACT [OBOL:automatic] "diencephalon neuraxis segment" EXACT [OBOL:automatic] "diencephalon regional part of brain" EXACT [OBOL:automatic] "diencephalon segment" EXACT [FMA:62005] "diencephalon segment of brain" EXACT [OBOL:automatic] "interbrain anatomical structure of brain" EXACT [OBOL:automatic] "interbrain biological structure of brain" EXACT [OBOL:automatic] "interbrain brain anatomical structure" EXACT [OBOL:automatic] "interbrain brain biological structure" EXACT [OBOL:automatic] "interbrain neuraxis segment" EXACT [OBOL:automatic] "interbrain regional part of brain" EXACT [OBOL:automatic] "interbrain segment of brain" EXACT [OBOL:automatic] "mature diencephalon anatomical structure of brain" EXACT [OBOL:automatic] "mature diencephalon biological structure of brain" EXACT [OBOL:automatic] "mature diencephalon brain anatomical structure" EXACT [OBOL:automatic] "mature diencephalon brain biological structure" EXACT [OBOL:automatic] "mature diencephalon neuraxis segment" EXACT [OBOL:automatic] "mature diencephalon regional part of brain" EXACT [OBOL:automatic] "mature diencephalon segment of brain" EXACT [OBOL:automatic] "neuraxis segment of between brain" EXACT [OBOL:automatic] "neuraxis segment of diencephalon" EXACT [OBOL:automatic] "neuraxis segment of interbrain" EXACT [OBOL:automatic] "neuraxis segment of mature diencephalon" EXACT [OBOL:automatic] "regional part of brain of between brain" EXACT [OBOL:automatic] "regional part of brain of diencephalon" EXACT [OBOL:automatic] "regional part of brain of interbrain" EXACT [OBOL:automatic] "regional part of brain of mature diencephalon" EXACT [OBOL:automatic] "segment of brain of between brain" EXACT [OBOL:automatic] "segment of brain of diencephalon" EXACT [OBOL:automatic] "segment of brain of interbrain" EXACT [OBOL:automatic] "segment of brain of mature diencephalon" EXACT [OBOL:automatic] "segment of diencephalon" EXACT [NIF_GrossAnatomy:birnlex_1685] | ||
| Alt_id: | UBERON:NIF_GrossAnatomy_birnlex_1685-FMA_62005 |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0002780(regional part of forebrain) |
|---|---|
| part_of: | UBERON:0001894(diencephalon) |
Children
| is a: | UBERON:0001897 (dorsal plus ventral thalamus),UBERON:0001899 (epithalamus),UBERON:0002757 (regional part of epithalamus),UBERON:0010225 (thalamic complex) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10154-103A1 (thalamus, adult, donor10252)
- 10160-103A7 (pineal gland, adult, donor10252)
- 10168-103B6 (thalamus - adult, donor10196)
- 10179-103C8 (pineal gland - adult, donor10196)
- 10366-105F6 (thalamus, newborn, donor10223)
- 10370-105G1 (thalamus, adult, donor10258)
- 10377-105G8 (pineal gland, adult, donor10258)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002784 (regional part of diencephalon), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.76e-110 | FFCP PHASE2:Hg19::chr15:75122737..75122741,+#_79d90823136ff9090c698e3c2def78c6 | p@chr15:75122737..75122741, + |
| 2.76e-110 | FFCP PHASE1:Hg19::chr15:75122737..75122741,+#_79d90823136ff9090c698e3c2def78c6 | p@chr15:75122737..75122741, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr15:55470984..55471009,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr15:55470984..55471009, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr1:154540028..154540037,+#_d4b612b81135e7d6f100ad68e256a789 | p4@CHRNB2 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:135473063..135473075,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr8:135473063..135473075, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr1:57914399..57914402,+#_d4b612b81135e7d6f100ad68e256a789 | p@chr1:57914399..57914402, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr10:18580269..18580290,+#_d4b612b81135e7d6f100ad68e256a789 | p@chr10:18580269..18580290, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr11:18067951..18067954,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr11:18067951..18067954, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr5:134871183..134871197,-#_d4b612b81135e7d6f100ad68e256a789 | p3@NEUROG1 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr2:17141934..17141935,+#_d4b612b81135e7d6f100ad68e256a789 | p@chr2:17141934..17141935, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:135504353..135504365,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr8:135504353..135504365, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr5:136328601..136328607,-#_d4b612b81135e7d6f100ad68e256a789 | p25@SPOCK1 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr13:52650530..52650533,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr13:52650530..52650533, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr3:128170725..128170735,+#_d4b612b81135e7d6f100ad68e256a789 | p@chr3:128170725..128170735, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr20:44991864..44991887,-#_d4b612b81135e7d6f100ad68e256a789 | p10@SLC35C2 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr11:72297717..72297725,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr11:72297717..72297725, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr4:20985967..20985972,-#_d4b612b81135e7d6f100ad68e256a789 | p28@KCNIP4 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:121088121..121088131,+#_d4b612b81135e7d6f100ad68e256a789 | p11@CABP1 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:55422565..55422604,+#_d4b612b81135e7d6f100ad68e256a789 | p@chr12:55422565..55422604, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr2:17040158..17040170,+#_d4b612b81135e7d6f100ad68e256a789 | p@chr2:17040158..17040170, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:81859007..81859036,+#_d4b612b81135e7d6f100ad68e256a789 | p@chr12:81859007..81859036, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr7:9178350..9178369,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr7:9178350..9178369, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr9:37692930..37692936,+#_d4b612b81135e7d6f100ad68e256a789 | p@chr9:37692930..37692936, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr1:99860883..99860921,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr1:99860883..99860921, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr5:119867229..119867240,+#_d4b612b81135e7d6f100ad68e256a789 | p9@PRR16 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:49621641..49621650,+#_d4b612b81135e7d6f100ad68e256a789 | p22@TUBA1C |
| 1.55e-98 | FFCP PHASE2:Hg19::chr7:129084265..129084288,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr7:129084265..129084288, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:135522475..135522486,-#_d4b612b81135e7d6f100ad68e256a789 | p16@ZFAT |
| 1.55e-98 | FFCP PHASE1:Hg19::chr5:7338484..7338504,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr5:7338484..7338504, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:135473748..135473753,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr8:135473748..135473753, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr11:18067959..18067962,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr11:18067959..18067962, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:99033409..99033415,+#_d4b612b81135e7d6f100ad68e256a789 | p16@MATN2 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:6954834..6954841,+#_d4b612b81135e7d6f100ad68e256a789 | p9@GNB3 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr13:21399081..21399087,+#_d4b612b81135e7d6f100ad68e256a789 | p@chr13:21399081..21399087, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr5:134871183..134871197,-#_d4b612b81135e7d6f100ad68e256a789 | p3@NEUROG1 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:135504353..135504365,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr8:135504353..135504365, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr16:18066392..18066397,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr16:18066392..18066397, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chrX:146290937..146290942,+#_d4b612b81135e7d6f100ad68e256a789 | p@chrX:146290937..146290942, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:13009334..13009341,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr6:13009334..13009341, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:33087873..33087886,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr6:33087873..33087886, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:81859007..81859036,+#_d4b612b81135e7d6f100ad68e256a789 | p@chr12:81859007..81859036, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr3:54952420..54952425,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr3:54952420..54952425, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:135473063..135473075,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr8:135473063..135473075, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr1:57914399..57914402,+#_d4b612b81135e7d6f100ad68e256a789 | p@chr1:57914399..57914402, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr11:74951707..74951719,+#_d4b612b81135e7d6f100ad68e256a789 | p9@LOC100507050 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr4:20985967..20985972,-#_d4b612b81135e7d6f100ad68e256a789 | p28@KCNIP4 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr16:51174216..51174239,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr16:51174216..51174239, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr9:37692930..37692936,+#_d4b612b81135e7d6f100ad68e256a789 | p@chr9:37692930..37692936, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr3:128170725..128170735,+#_d4b612b81135e7d6f100ad68e256a789 | p@chr3:128170725..128170735, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr11:18053180..18053192,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr11:18053180..18053192, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr7:9202487..9202498,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr7:9202487..9202498, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr20:44991864..44991887,-#_d4b612b81135e7d6f100ad68e256a789 | p10@SLC35C2 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr3:100942376..100942381,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr3:100942376..100942381, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr14:55282406..55282415,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr14:55282406..55282415, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr17:74463567..74463574,+#_d4b612b81135e7d6f100ad68e256a789 | p4@AANAT |
| 1.55e-98 | FFCP PHASE2:Hg19::chr2:108602341..108602352,+#_d4b612b81135e7d6f100ad68e256a789 | p@chr2:108602341..108602352, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr16:18066392..18066397,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr16:18066392..18066397, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr1:99860883..99860921,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr1:99860883..99860921, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr5:119867229..119867240,+#_d4b612b81135e7d6f100ad68e256a789 | p9@PRR16 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr17:74463567..74463574,+#_d4b612b81135e7d6f100ad68e256a789 | p4@AANAT |
| 1.55e-98 | FFCP PHASE2:Hg19::chr13:52650541..52650548,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr13:52650541..52650548, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:6954834..6954841,+#_d4b612b81135e7d6f100ad68e256a789 | p9@GNB3 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:116085391..116085419,+#_d4b612b81135e7d6f100ad68e256a789 | p@chr8:116085391..116085419, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr1:240177602..240177607,+#_d4b612b81135e7d6f100ad68e256a789 | p17@FMN2 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:135473748..135473753,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr8:135473748..135473753, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr3:54952420..54952425,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr3:54952420..54952425, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr18:56962131..56962138,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr18:56962131..56962138, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:121088121..121088131,+#_d4b612b81135e7d6f100ad68e256a789 | p11@CABP1 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr11:18041199..18041200,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr11:18041199..18041200, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr2:108604491..108604499,+#_d4b612b81135e7d6f100ad68e256a789 | p8@SLC5A7 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:99033417..99033423,+#_d4b612b81135e7d6f100ad68e256a789 | p17@MATN2 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr18:56962131..56962138,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr18:56962131..56962138, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr11:18063669..18063678,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr11:18063669..18063678, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chrX:146290937..146290942,+#_d4b612b81135e7d6f100ad68e256a789 | p@chrX:146290937..146290942, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr9:88661694..88661709,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr9:88661694..88661709, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:13009334..13009341,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr6:13009334..13009341, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr2:17065916..17065929,+#_d4b612b81135e7d6f100ad68e256a789 | p@chr2:17065916..17065929, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr13:21399081..21399087,+#_d4b612b81135e7d6f100ad68e256a789 | p@chr13:21399081..21399087, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:87751918..87751928,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr8:87751918..87751928, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:49621641..49621650,+#_d4b612b81135e7d6f100ad68e256a789 | p22@TUBA1C |
| 1.55e-98 | FFCP PHASE1:Hg19::chr3:100942376..100942381,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr3:100942376..100942381, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr14:55282406..55282415,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr14:55282406..55282415, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr16:51174216..51174239,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr16:51174216..51174239, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:99734965..99734976,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr12:99734965..99734976, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr3:107545606..107545631,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr3:107545606..107545631, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr11:18067959..18067962,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr11:18067959..18067962, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr7:9228468..9228494,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr7:9228468..9228494, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr3:101038595..101038604,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr3:101038595..101038604, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:135504405..135504410,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr8:135504405..135504410, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr13:52650541..52650548,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr13:52650541..52650548, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr7:9202487..9202498,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr7:9202487..9202498, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr7:120842768..120842790,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr7:120842768..120842790, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr8:116085391..116085419,+#_d4b612b81135e7d6f100ad68e256a789 | p@chr8:116085391..116085419, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr11:84530787..84530803,+#_d4b612b81135e7d6f100ad68e256a789 | p@chr11:84530787..84530803, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr1:240177602..240177607,+#_d4b612b81135e7d6f100ad68e256a789 | p17@FMN2 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr3:17085717..17085733,-#_d4b612b81135e7d6f100ad68e256a789 | p2@PLCL2-AS1 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:121088132..121088135,+#_d4b612b81135e7d6f100ad68e256a789 | p15@CABP1 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:55422858..55422866,+#_d4b612b81135e7d6f100ad68e256a789 | p@chr12:55422858..55422866, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr2:17064630..17064651,+#_d4b612b81135e7d6f100ad68e256a789 | p@chr2:17064630..17064651, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr7:32468385..32468392,-#_d4b612b81135e7d6f100ad68e256a789 | p@chr7:32468385..32468392, - |
