UBERON:0003057
From FANTOM5_SSTAR
| Name: | chordal neural plate | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "The portion of neural plate posterior to the mid-hindbrain junction." [XB:curator] | ||
| Xrefs: |
| ||
| Synonyms: | "posterior neural plate" RELATED [] | ||
| Comments: | This class was created automatically from a combination of ontologies | ||
| Alt_id: | UBERON:XAO_0000046-ZFA_0007017 |
Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.
link to ontology dataset
data
Parents
| is_a: | UBERON:0005423(developing anatomical structure) |
|---|---|
| part_of: | UBERON:0003075(neural plate) |
Children
| develops from: | UBERON:0003076 (posterior neural tube) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003057 (chordal neural plate), sorted by p-values
Analyst: Hideya Kawaji
link to source dataset
human : data
mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.31e-117 | FFCP PHASE1:Hg19::chr11:20621148..20621166,+#_652bfd2b9d37248d039b0178a0da7d63 | p1@SLC6A5 |
| 2.31e-117 | FFCP PHASE2:Hg19::chr11:20621148..20621166,+#_652bfd2b9d37248d039b0178a0da7d63 | p1@SLC6A5 |
| 5.68e-99 | FFCP PHASE2:Hg19::chr9:73736442..73736451,-#_1ef39a3320d90e9ad7127418c8adc2f1 | p9@TRPM3 |
| 5.68e-99 | FFCP PHASE1:Hg19::chr9:73736442..73736451,-#_1ef39a3320d90e9ad7127418c8adc2f1 | p9@TRPM3 |
| 2.92e-96 | FFCP PHASE2:Hg19::chr10:130489605..130489614,-#_42482adf9a499861174a6d4d1b0ec6aa | p@chr10:130489605..130489614, - |
| 2.92e-96 | FFCP PHASE1:Hg19::chr10:130489605..130489614,-#_42482adf9a499861174a6d4d1b0ec6aa | p@chr10:130489605..130489614, - |
| 1.43e-91 | FFCP PHASE1:Hg19::chr2:69741832..69741847,-#_6a91f8af51f1c9a0e5690b9bac33c7e7 | p@chr2:69741832..69741847, - |
| 1.43e-91 | FFCP PHASE2:Hg19::chr2:69741832..69741847,-#_6a91f8af51f1c9a0e5690b9bac33c7e7 | p@chr2:69741832..69741847, - |
| 2.4e-88 | FFCP PHASE2:Hg19::chr2:72381655..72381673,-#_42be2dc86faa84033d4da29fcb4d7190 | p@chr2:72381655..72381673, - |
| 2.4e-88 | FFCP PHASE1:Hg19::chr2:72381655..72381673,-#_42be2dc86faa84033d4da29fcb4d7190 | p@chr2:72381655..72381673, - |
| 3.88e-87 | FFCP PHASE1:Hg19::chr5:151304948..151304984,-#_d7e37ffc7c20cd655bc04cdf486c4002 | p@chr5:151304948..151304984, - |
| 3.88e-87 | FFCP PHASE2:Hg19::chr5:151304948..151304984,-#_d7e37ffc7c20cd655bc04cdf486c4002 | p@chr5:151304948..151304984, - |
| 4.42e-84 | FFCP PHASE2:Hg19::chr5:151304337..151304405,-#_24c21c67783f3b98d78fd06568658804 | p1@GLRA1 |
| 4.42e-84 | FFCP PHASE1:Hg19::chr5:151304337..151304405,-#_24c21c67783f3b98d78fd06568658804 | p1@GLRA1 |
| 1.7e-81 | FFCP PHASE1:Hg19::chrX:106692537..106692551,+#_bd339801162dd52a3cd272d79f8f081e | p@chrX:106692537..106692551, + |
| 1.7e-81 | FFCP PHASE2:Hg19::chrX:106692537..106692551,+#_bd339801162dd52a3cd272d79f8f081e | p@chrX:106692537..106692551, + |
| 1.74e-81 | FFCP PHASE2:Hg19::chr9:8779377..8779397,-#_2f59db7decb06231a4a76d1771783a07 | p@chr9:8779377..8779397, - |
| 1.74e-81 | FFCP PHASE1:Hg19::chr9:8779377..8779397,-#_2f59db7decb06231a4a76d1771783a07 | p@chr9:8779377..8779397, - |
| 2.77e-80 | FFCP PHASE1:Hg19::chr9:128998376..128998387,-#_ff8974e12be8cc7c3bcb38c45b529377 | p@chr9:128998376..128998387, - |
| 2.77e-80 | FFCP PHASE2:Hg19::chr9:128998376..128998387,-#_ff8974e12be8cc7c3bcb38c45b529377 | p@chr9:128998376..128998387, - |
| 3.36e-79 | FFCP PHASE2:Hg19::chr19:29493486..29493497,+#_063c1aeeecef954af86444a89605200d | p2@LOC100505835 |
| 3.36e-79 | FFCP PHASE1:Hg19::chr19:29493486..29493497,+#_063c1aeeecef954af86444a89605200d | p2@LOC100505835 |
| 1.03e-78 | FFCP PHASE1:Hg19::chr2:25720324..25720333,-#_b00ac2007be06e97c28c60d169400dd5 | p15@DTNB |
| 1.03e-78 | FFCP PHASE2:Hg19::chr2:25720324..25720333,-#_b00ac2007be06e97c28c60d169400dd5 | p15@DTNB |
| 2.25e-76 | FFCP PHASE1:Hg19::chr17:42983316..42983326,-#_e3f5893f6126ff4373813a5e7694ae7c | p@chr17:42983316..42983326, - |
| 2.25e-76 | FFCP PHASE2:Hg19::chr17:42983316..42983326,-#_e3f5893f6126ff4373813a5e7694ae7c | p@chr17:42983316..42983326, - |
| 1.02e-75 | FFCP PHASE2:Hg19::chr17:10741337..10741344,-#_d2e2868c6005563cd3a2fd617b94990f | p3@PIRT |
| 1.02e-75 | FFCP PHASE1:Hg19::chr17:10741337..10741344,-#_d2e2868c6005563cd3a2fd617b94990f | p3@PIRT |
| 1.18e-75 | FFCP PHASE1:Hg19::chr17:11143564..11143575,+#_8bb2bcc7a6819837fb26bed99f447bf6 | p@chr17:11143564..11143575, + |
| 1.18e-75 | FFCP PHASE2:Hg19::chr17:11143564..11143575,+#_8bb2bcc7a6819837fb26bed99f447bf6 | p@chr17:11143564..11143575, + |
| 6.09e-73 | FFCP PHASE2:Hg19::chr2:25720352..25720388,-#_6d6c0bf7116e5b3bdcb6f54024aa941f | p7@DTNB |
| 6.09e-73 | FFCP PHASE1:Hg19::chr2:25720352..25720388,-#_6d6c0bf7116e5b3bdcb6f54024aa941f | p7@DTNB |
| 7.63e-73 | FFCP PHASE1:Hg19::chr1:62417735..62417748,+#_7e0fc2ac46acff2863e01f2281c3117d | p9@INADL |
| 7.63e-73 | FFCP PHASE2:Hg19::chr1:62417735..62417748,+#_7e0fc2ac46acff2863e01f2281c3117d | p9@INADL |
| 4.62e-72 | FFCP PHASE1:Hg19::chr6:138959885..138959912,-#_98ecb79c09860e754245bcdfb20ca9e4 | p@chr6:138959885..138959912, - |
| 4.62e-72 | FFCP PHASE2:Hg19::chr6:138959885..138959912,-#_98ecb79c09860e754245bcdfb20ca9e4 | p@chr6:138959885..138959912, - |
| 8.09e-70 | FFCP PHASE1:Hg19::chrX:106692569..106692585,+#_d44bdb9c8df69edb2b92cbc3e8018370 | +, p@chrX:106692569..106692585 |
| 8.09e-70 | FFCP PHASE2:Hg19::chr16:290098..290109,+#_d44bdb9c8df69edb2b92cbc3e8018370 | p13@ITFG3 |
| 8.09e-70 | FFCP PHASE2:Hg19::chrX:106692569..106692585,+#_d44bdb9c8df69edb2b92cbc3e8018370 | p@chrX:106692569..106692585, + |
| 8.09e-70 | FFCP PHASE1:Hg19::chr16:290098..290109,+#_d44bdb9c8df69edb2b92cbc3e8018370 | p13@ITFG3 |
| 4.02e-69 | FFCP PHASE1:Hg19::chr12:41136144..41136158,+#_2312beaf9d3a9d39487fb993bcf5227b | p14@CNTN1 |
| 4.02e-69 | FFCP PHASE2:Hg19::chr12:41136144..41136158,+#_2312beaf9d3a9d39487fb993bcf5227b | p14@CNTN1 |
| 1.26e-67 | FFCP PHASE1:Hg19::chr5:151304987..151304998,-#_ea0844a663489faa6ac38c22177df64c | p@chr5:151304987..151304998, - |
| 1.26e-67 | FFCP PHASE2:Hg19::chr5:151304987..151304998,-#_ea0844a663489faa6ac38c22177df64c | p@chr5:151304987..151304998, - |
| 1.41e-67 | FFCP PHASE2:Hg19::chr17:42993851..42993858,-#_1bed52849e7d74f4341e3ca939399598 | p@chr17:42993851..42993858, - |
| 1.41e-67 | FFCP PHASE1:Hg19::chr17:42993851..42993858,-#_1bed52849e7d74f4341e3ca939399598 | p@chr17:42993851..42993858, - |
| 1.41e-67 | FFCP PHASE1:Hg19::chr11:122733138..122733178,+#_1bed52849e7d74f4341e3ca939399598 | p3@CRTAM |
| 1.41e-67 | FFCP PHASE2:Hg19::chr11:122733138..122733178,+#_1bed52849e7d74f4341e3ca939399598 | p3@CRTAM |
| 1.58e-67 | FFCP PHASE2:Hg19::chr9:135457981..135458003,+#_5cc356945565bb4ca8571f2d8288e2ec | p1@BARHL1 |
| 1.58e-67 | FFCP PHASE1:Hg19::chr9:135457981..135458003,+#_5cc356945565bb4ca8571f2d8288e2ec | p1@BARHL1 |
| 1.99e-67 | FFCP PHASE2:Hg19::chr4:117675601..117675614,+#_c824f89275be9db0a21387178d0f3b8c | p@chr4:117675601..117675614, + |
| 1.99e-67 | FFCP PHASE1:Hg19::chr4:117675601..117675614,+#_c824f89275be9db0a21387178d0f3b8c | p@chr4:117675601..117675614, + |
| 1.58e-66 | FFCP PHASE1:Hg19::chr6:132937878..132937891,-#_e4f0001b705f0be07d91a787a5412fc2 | p@chr6:132937878..132937891, - |
| 1.58e-66 | FFCP PHASE2:Hg19::chr6:132937878..132937891,-#_e4f0001b705f0be07d91a787a5412fc2 | p@chr6:132937878..132937891, - |
| 4.89e-66 | FFCP PHASE2:Hg19::chr10:130489635..130489656,-#_d4b2124df94313484a6a16ab0726acfd | p@chr10:130489635..130489656, - |
| 4.89e-66 | FFCP PHASE1:Hg19::chr10:130489635..130489656,-#_d4b2124df94313484a6a16ab0726acfd | p@chr10:130489635..130489656, - |
| 7.04e-66 | FFCP PHASE1:Hg19::chr11:114146042..114146050,-#_d4c0752ef6502dc269d1e7fec3d548de | p@chr11:114146042..114146050, - |
| 7.04e-66 | FFCP PHASE1:Hg19::chr11:31788840..31788847,-#_d4c0752ef6502dc269d1e7fec3d548de | p@chr11:31788840..31788847, - |
| 7.04e-66 | FFCP PHASE1:Hg19::chr6:152884391..152884402,-#_d4c0752ef6502dc269d1e7fec3d548de | p@chr6:152884391..152884402, - |
| 7.04e-66 | FFCP PHASE1:Hg19::chr4:117873850..117873861,-#_d4c0752ef6502dc269d1e7fec3d548de | p@chr4:117873850..117873861, - |
| 7.04e-66 | FFCP PHASE2:Hg19::chr4:117873850..117873861,-#_d4c0752ef6502dc269d1e7fec3d548de | p@chr4:117873850..117873861, - |
| 7.04e-66 | FFCP PHASE2:Hg19::chr11:114146042..114146050,-#_d4c0752ef6502dc269d1e7fec3d548de | p@chr11:114146042..114146050, - |
| 7.04e-66 | FFCP PHASE2:Hg19::chr11:31788840..31788847,-#_d4c0752ef6502dc269d1e7fec3d548de | p@chr11:31788840..31788847, - |
| 7.04e-66 | FFCP PHASE2:Hg19::chr6:152884391..152884402,-#_d4c0752ef6502dc269d1e7fec3d548de | p@chr6:152884391..152884402, - |
| 2.03e-65 | FFCP PHASE2:Hg19::chr11:17172327..17172344,-#_91ab23cde3ceb515b526a3aea6dde932 | p@chr11:17172327..17172344, - |
| 2.03e-65 | FFCP PHASE1:Hg19::chr11:17172327..17172344,-#_91ab23cde3ceb515b526a3aea6dde932 | p@chr11:17172327..17172344, - |
| 2.32e-65 | FFCP PHASE1:Hg19::chr17:26902537..26902548,-#_b8a883eb302e88476c79e5a8b42a6d5d | p3@ALDOC |
| 2.32e-65 | FFCP PHASE2:Hg19::chr17:26902537..26902548,-#_b8a883eb302e88476c79e5a8b42a6d5d | p3@ALDOC |
| 3.04e-65 | FFCP PHASE2:Hg19::chr16:290135..290154,+#_bd445acec3454d6a483735ac6ee18a63 | p10@ITFG3 |
| 3.04e-65 | FFCP PHASE1:Hg19::chr16:290135..290154,+#_bd445acec3454d6a483735ac6ee18a63 | p10@ITFG3 |
| 3.8e-64 | FFCP PHASE1:Hg19::chr18:77014816..77014819,-#_f79aff5977fef861f42558e5118149e7 | p@chr18:77014816..77014819, - |
| 3.8e-64 | FFCP PHASE2:Hg19::chr18:77014816..77014819,-#_f79aff5977fef861f42558e5118149e7 | p@chr18:77014816..77014819, - |
| 4.17e-64 | FFCP PHASE1:Hg19::chr14:62010202..62010207,-#_3eb2a9dd74b4b35bfaff2d6d80a0a156 | p@chr14:62010202..62010207, - |
| 4.17e-64 | FFCP PHASE2:Hg19::chr14:62010202..62010207,-#_3eb2a9dd74b4b35bfaff2d6d80a0a156 | p@chr14:62010202..62010207, - |
| 4.32e-64 | FFCP PHASE2:Hg19::chr5:136070614..136070625,+#_6866b05e9da74deaf1ffb0e5dc736a1f | p1@ENST00000502421 |
| 4.32e-64 | FFCP PHASE1:Hg19::chr5:136070614..136070625,+#_6866b05e9da74deaf1ffb0e5dc736a1f | p1@ENST00000502421 |
| 5.53e-64 | FFCP PHASE2:Hg19::chr2:179739649..179739660,-#_53a62636f3fe1fbda15df9c2633efe83 | p@chr2:179739649..179739660, - |
| 5.53e-64 | FFCP PHASE1:Hg19::chr1:62417689..62417701,+#_53a62636f3fe1fbda15df9c2633efe83 | p10@INADL |
| 5.53e-64 | FFCP PHASE1:Hg19::chr2:179739649..179739660,-#_53a62636f3fe1fbda15df9c2633efe83 | p@chr2:179739649..179739660, - |
| 5.53e-64 | FFCP PHASE2:Hg19::chr1:62417689..62417701,+#_53a62636f3fe1fbda15df9c2633efe83 | p10@INADL |
| 7.09e-64 | FFCP PHASE1:Hg19::chr15:79356984..79356998,-#_16eb6ee85b0c07ab7aa72fd8032c372d | p8@RASGRF1 |
| 7.09e-64 | FFCP PHASE2:Hg19::chr15:79356984..79356998,-#_16eb6ee85b0c07ab7aa72fd8032c372d | p8@RASGRF1 |
| 6.57e-63 | FFCP PHASE1:Hg19::chr2:25720404..25720435,-#_653363687ea066244a7d35aa1cc0e87f | p8@DTNB |
| 6.57e-63 | FFCP PHASE2:Hg19::chr2:25720404..25720435,-#_653363687ea066244a7d35aa1cc0e87f | p8@DTNB |
| 4.25e-62 | FFCP PHASE1:Hg19::chr5:72570629..72570651,-#_6d1ef3b15020b7822bf0c95d98667b29 | p@chr5:72570629..72570651, - |
| 4.25e-62 | FFCP PHASE2:Hg19::chr5:72570629..72570651,-#_6d1ef3b15020b7822bf0c95d98667b29 | p@chr5:72570629..72570651, - |
| 9.47e-62 | FFCP PHASE2:Hg19::chr17:68101098..68101109,+#_77564d21b5966a31a6738b492941e850 | p6@KCNJ16 |
| 9.47e-62 | FFCP PHASE1:Hg19::chr17:68101098..68101109,+#_77564d21b5966a31a6738b492941e850 | p6@KCNJ16 |
| 9.66e-62 | FFCP PHASE1:Hg19::chr5:20575812..20575831,-#_872474e13bb963589a8f8b8e12d124f0 | p4@CDH18 |
| 9.66e-62 | FFCP PHASE2:Hg19::chr5:20575812..20575831,-#_872474e13bb963589a8f8b8e12d124f0 | p4@CDH18 |
| 1.29e-60 | FFCP PHASE1:Mm9::chr7:57167425..57167443,+#_32cd34303bb738a6eaf2cb10cb93f08b | p@chr7:57167425..57167443, + |
| 1.29e-60 | FFCP PHASE2:Mm9::chr7:57167425..57167443,+#_32cd34303bb738a6eaf2cb10cb93f08b | p@chr7:57167425..57167443, + |
| 7.99e-60 | FFCP PHASE2:Hg19::chr1:90885681..90885693,-#_d65aa569cdd0ee4054f8edcc13aa4afe | p@chr1:90885681..90885693, - |
| 7.99e-60 | FFCP PHASE1:Hg19::chr1:90885681..90885693,-#_d65aa569cdd0ee4054f8edcc13aa4afe | p@chr1:90885681..90885693, - |
| 9.54e-60 | FFCP PHASE1:Hg19::chr6:158438086..158438095,+#_366a6b9a538bc521de3d22a7ef6d06db | p8@SYNJ2 |
| 9.54e-60 | FFCP PHASE2:Hg19::chr12:26765770..26765792,-#_366a6b9a538bc521de3d22a7ef6d06db | p@chr12:26765770..26765792, - |
| 9.54e-60 | FFCP PHASE1:Hg19::chr12:26765770..26765792,-#_366a6b9a538bc521de3d22a7ef6d06db | p@chr12:26765770..26765792, - |
| 9.54e-60 | FFCP PHASE2:Hg19::chr6:158438086..158438095,+#_366a6b9a538bc521de3d22a7ef6d06db | p8@SYNJ2 |
| 1.03e-59 | FFCP PHASE2:Hg19::chr17:43035276..43035287,+#_6f8ca14b0cb56ece3331bfdedc1f9f04 | p@chr17:43035276..43035287, + |
| 1.03e-59 | FFCP PHASE1:Hg19::chr17:43035276..43035287,+#_6f8ca14b0cb56ece3331bfdedc1f9f04 | p@chr17:43035276..43035287, + |
