Personal tools

UBERON:0003067

From FANTOM5_SSTAR

Jump to: navigation, search

Name:dorsolateral placode
Namespace:FANTOM
Definition:"Lateral neurogenic placodes positioned dorsal of the epibranchial placodes." [ZFIN:curator]
Xrefs:
links:

TAO:0001310
VHOG:0000103
XAO:0000187

ZFA:0001310
Synonyms: "dorsolateral placodes" EXACT PLURAL [ZFA:0001310]
Alt_id: UBERON:XAO_0000187-ZFA_0001310

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0009955(neurogenic placode)



Children

is a:UBERON:0003069 (otic placode)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003067 (dorsolateral placode), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE1:Mm9::chr1:154246932..154246939,+#_6f69956b8073250c371333dfea6820cep7@Glt25d2
1.87e-86FFCP PHASE1:Mm9::chr14:102297747..102297765,+#_6f69956b8073250c371333dfea6820cep@chr14:102297747..102297765, +
1.87e-86FFCP PHASE2:Mm9::chr5:144115382..144115389,+#_6f69956b8073250c371333dfea6820cep@chr5:144115382..144115389, +
1.87e-86FFCP PHASE1:Mm9::chr5:30710455..30710464,-#_6f69956b8073250c371333dfea6820cep9@Otof
1.87e-86FFCP PHASE2:Mm9::chr1:172843813..172843834,-#_6f69956b8073250c371333dfea6820cep@chr1:172843813..172843834, -
1.87e-86FFCP PHASE1:Mm9::chr9:42207375..42207384,-#_6f69956b8073250c371333dfea6820cep@chr9:42207375..42207384, -
1.87e-86FFCP PHASE1:Mm9::chr2:67011956..67011967,+#_6f69956b8073250c371333dfea6820cep1@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr4:130461150..130461185,+#_6f69956b8073250c371333dfea6820cep@chr4:130461150..130461185, +
1.87e-86FFCP PHASE2:Mm9::chr3:100724698..100724706,+#_6f69956b8073250c371333dfea6820cep@chr3:100724698..100724706, +
1.87e-86FFCP PHASE2:Mm9::chr6:30619378..30619412,-#_6f69956b8073250c371333dfea6820cep11@Tsga14
1.87e-86FFCP PHASE1:Mm9::chr17:31335953..31335957,-#_6f69956b8073250c371333dfea6820cep3@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr19:10536797..10536802,-#_6f69956b8073250c371333dfea6820cep@chr19:10536797..10536802, -
1.87e-86FFCP PHASE2:Mm9::chr9:56208792..56208814,-#_6f69956b8073250c371333dfea6820cep@chr9:56208792..56208814, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207887..42207960,-#_6f69956b8073250c371333dfea6820cep1@Tecta
1.87e-86FFCP PHASE1:Mm9::chr3:154459231..154459240,+#_6f69956b8073250c371333dfea6820cep@chr3:154459231..154459240, +
1.87e-86FFCP PHASE1:Mm9::chr10:107156949..107156956,-#_6f69956b8073250c371333dfea6820cep3@Ptprq
1.87e-86FFCP PHASE2:Mm9::chr11:102123535..102123544,+#_6f69956b8073250c371333dfea6820cep5@BC030867
1.87e-86FFCP PHASE1:Mm9::chr18:38104702..38104718,-#_6f69956b8073250c371333dfea6820cep@chr18:38104702..38104718, -
1.87e-86FFCP PHASE1:Mm9::chr7:141605556..141605563,-#_6f69956b8073250c371333dfea6820cep@chr7:141605556..141605563, -
1.87e-86FFCP PHASE1:Mm9::chr1:194818647..194818660,-#_6f69956b8073250c371333dfea6820cep@chr1:194818647..194818660, -
1.87e-86FFCP PHASE2:Mm9::chr3:35012425..35012439,+#_6f69956b8073250c371333dfea6820cep@chr3:35012425..35012439, +
1.87e-86FFCP PHASE2:Mm9::chr4:115556989..115556997,+#_6f69956b8073250c371333dfea6820cep1@Kncn
1.87e-86FFCP PHASE1:Mm9::chr19:22767090..22767099,+#_6f69956b8073250c371333dfea6820cep18@Trpm3
1.87e-86FFCP PHASE2:Mm9::chr14:102297747..102297765,+#_6f69956b8073250c371333dfea6820cep@chr14:102297747..102297765, +
1.87e-86FFCP PHASE2:Mm9::chr9:42206745..42206774,-#_6f69956b8073250c371333dfea6820cep@chr9:42206745..42206774, -
1.87e-86FFCP PHASE2:Mm9::chr19:55255206..55255223,+#_6f69956b8073250c371333dfea6820cep1@Tectb
1.87e-86FFCP PHASE2:Mm9::chr3:106986057..106986062,+#_6f69956b8073250c371333dfea6820cep1@Kcna10
1.87e-86FFCP PHASE2:Mm9::chr2:14685072..14685084,+#_6f69956b8073250c371333dfea6820cep41@Cacnb2
1.87e-86FFCP PHASE1:Mm9::chr2:136942131..136942142,-#_6f69956b8073250c371333dfea6820cep6@Jag1
1.87e-86FFCP PHASE2:Mm9::chr7:109052297..109052300,-#_6f69956b8073250c371333dfea6820cep2@Tomt
1.87e-86FFCP PHASE2:Mm9::chr5:30710416..30710440,-#_6f69956b8073250c371333dfea6820cep2@Otof
1.87e-86FFCP PHASE1:Mm9::chr6:113251570..113251578,+#_6f69956b8073250c371333dfea6820cep@chr6:113251570..113251578, +
1.87e-86FFCP PHASE2:Mm9::chr4:151505798..151505818,-#_6f69956b8073250c371333dfea6820cep21@Espn
1.87e-86FFCP PHASE2:Mm9::chr1:93218694..93218705,+#_6f69956b8073250c371333dfea6820cep1@Espnl
1.87e-86FFCP PHASE1:Mm9::chr2:9811162..9811171,-#_6f69956b8073250c371333dfea6820cep2@9230102O04Rik
1.87e-86FFCP PHASE1:Mm9::chr13:43699188..43699216,+#_6f69956b8073250c371333dfea6820cep@chr13:43699188..43699216, +
1.87e-86FFCP PHASE2:Mm9::chr18:42158627..42158630,-#_6f69956b8073250c371333dfea6820cep@chr18:42158627..42158630, -
1.87e-86FFCP PHASE1:Mm9::chr8:13414289..13414295,+#_6f69956b8073250c371333dfea6820cep@chr8:13414289..13414295, +
1.87e-86FFCP PHASE1:Mm9::chr19:55255206..55255223,+#_6f69956b8073250c371333dfea6820cep1@Tectb
1.87e-86FFCP PHASE1:Mm9::chr13:78257491..78257498,+#_6f69956b8073250c371333dfea6820cep@chr13:78257491..78257498, +
1.87e-86FFCP PHASE2:Mm9::chr13:78257491..78257498,+#_6f69956b8073250c371333dfea6820cep@chr13:78257491..78257498, +
1.87e-86FFCP PHASE2:Mm9::chr16:93971367..93971379,-#_6f69956b8073250c371333dfea6820cep@chr16:93971367..93971379, -
1.87e-86FFCP PHASE1:Mm9::chr1:16651649..16651655,+#_6f69956b8073250c371333dfea6820cep@chr1:16651649..16651655, +
1.87e-86FFCP PHASE2:Mm9::chr10:107156949..107156956,-#_6f69956b8073250c371333dfea6820cep3@Ptprq
1.87e-86FFCP PHASE1:Mm9::chr10:80806020..80806031,-#_6f69956b8073250c371333dfea6820cep3@Gipc3
1.87e-86FFCP PHASE2:Mm9::chr17:13983095..13983100,+#_6f69956b8073250c371333dfea6820cep@chr17:13983095..13983100, +
1.87e-86FFCP PHASE1:Mm9::chr2:75320183..75320189,+#_6f69956b8073250c371333dfea6820cep@chr2:75320183..75320189, +
1.87e-86FFCP PHASE2:Mm9::chr12:13508046..13508055,+#_6f69956b8073250c371333dfea6820cep@chr12:13508046..13508055, +
1.87e-86FFCP PHASE1:Mm9::chr1:93218694..93218705,+#_6f69956b8073250c371333dfea6820cep1@Espnl
1.87e-86FFCP PHASE2:Mm9::chr3:154693281..154693317,-#_6f69956b8073250c371333dfea6820cep@chr3:154693281..154693317, -
1.87e-86FFCP PHASE2:Mm9::chr9:42208142..42208157,-#_6f69956b8073250c371333dfea6820cep10@Tecta
1.87e-86FFCP PHASE1:Mm9::chr10:107349392..107349413,-#_6f69956b8073250c371333dfea6820cep2@Otogl
1.87e-86FFCP PHASE1:Mm9::chr11:75421384..75421397,+#_6f69956b8073250c371333dfea6820cep@chr11:75421384..75421397, +
1.87e-86FFCP PHASE2:Mm9::chr3:69811590..69811601,+#_6f69956b8073250c371333dfea6820cep1@Otol1
1.87e-86FFCP PHASE2:Mm9::chr4:63079735..63079745,-#_6f69956b8073250c371333dfea6820cep@chr4:63079735..63079745, -
1.87e-86FFCP PHASE1:Mm9::chr1:60561636..60561645,-#_6f69956b8073250c371333dfea6820cep@chr1:60561636..60561645, -
1.87e-86FFCP PHASE2:Mm9::chr2:121206695..121206711,-#_6f69956b8073250c371333dfea6820cep1@Strc
1.87e-86FFCP PHASE1:Mm9::chr6:30619443..30619450,-#_6f69956b8073250c371333dfea6820cep13@Tsga14
1.87e-86FFCP PHASE2:Mm9::chr17:31335903..31335921,-#_6f69956b8073250c371333dfea6820cep2@Tmprss3
1.87e-86FFCP PHASE1:Mm9::chr11:102123554..102123566,+#_6f69956b8073250c371333dfea6820cep4@BC030867
1.87e-86FFCP PHASE2:Mm9::chr6:86746562..86746579,-#_6f69956b8073250c371333dfea6820cep@chr6:86746562..86746579, -
1.87e-86FFCP PHASE2:Mm9::chr15:58480061..58480066,+#_6f69956b8073250c371333dfea6820cep5@Fer1l6
1.87e-86FFCP PHASE2:Mm9::chr9:42207777..42207789,-#_6f69956b8073250c371333dfea6820cep7@Tecta
1.87e-86FFCP PHASE1:Mm9::chr15:65641779..65641790,+#_6f69956b8073250c371333dfea6820cep@chr15:65641779..65641790, +
1.87e-86FFCP PHASE2:Mm9::chr14:31283085..31283097,-#_6f69956b8073250c371333dfea6820cep@chr14:31283085..31283097, -
1.87e-86FFCP PHASE2:Mm9::chr11:114603036..114603048,+#_6f69956b8073250c371333dfea6820cep@chr11:114603036..114603048, +
1.87e-86FFCP PHASE1:Mm9::chr3:69811590..69811601,+#_6f69956b8073250c371333dfea6820cep1@Otol1
1.87e-86FFCP PHASE2:Mm9::chr16:96494788..96494801,+#_6f69956b8073250c371333dfea6820cep12@B3galt5
1.87e-86FFCP PHASE2:Mm9::chr1:154246932..154246939,+#_6f69956b8073250c371333dfea6820cep7@Glt25d2
1.87e-86FFCP PHASE2:Mm9::chr8:13414266..13414279,+#_6f69956b8073250c371333dfea6820cep@chr8:13414266..13414279, +
1.87e-86FFCP PHASE2:Mm9::chr16:45693840..45693856,-#_6f69956b8073250c371333dfea6820cep1@Tmprss7
1.87e-86FFCP PHASE2:Mm9::chr2:53464168..53464175,+#_6f69956b8073250c371333dfea6820cep@chr2:53464168..53464175, +
1.87e-86FFCP PHASE2:Mm9::chr5:72652660..72652667,+#_6f69956b8073250c371333dfea6820cep@chr5:72652660..72652667, +
1.87e-86FFCP PHASE1:Mm9::chr17:13983198..13983203,+#_6f69956b8073250c371333dfea6820cep@chr17:13983198..13983203, +
1.87e-86FFCP PHASE1:Mm9::chr15:12848147..12848162,+#_6f69956b8073250c371333dfea6820cep@chr15:12848147..12848162, +
1.87e-86FFCP PHASE1:Mm9::chr13:48087761..48087775,-#_6f69956b8073250c371333dfea6820cep@chr13:48087761..48087775, -
1.87e-86FFCP PHASE1:Mm9::chr6:86745686..86745727,-#_6f69956b8073250c371333dfea6820cep@chr6:86745686..86745727, -
1.87e-86FFCP PHASE1:Mm9::chr11:4689776..4689785,-#_6f69956b8073250c371333dfea6820cep@chr11:4689776..4689785, -
1.87e-86FFCP PHASE1:Mm9::chr10:108316802..108316807,-#_6f69956b8073250c371333dfea6820cep@chr10:108316802..108316807, -
1.87e-86FFCP PHASE1:Mm9::chr1:172843847..172843880,-#_6f69956b8073250c371333dfea6820cep@chr1:172843847..172843880, -
1.87e-86FFCP PHASE2:Mm9::chr10:107349392..107349413,-#_6f69956b8073250c371333dfea6820cep2@Otogl
1.87e-86FFCP PHASE1:Mm9::chr16:96494788..96494801,+#_6f69956b8073250c371333dfea6820cep12@B3galt5
1.87e-86FFCP PHASE2:Mm9::chr8:13435173..13435186,+#_6f69956b8073250c371333dfea6820cep6@Fam70b
1.87e-86FFCP PHASE1:Mm9::chr9:42207998..42208009,-#_6f69956b8073250c371333dfea6820cep6@Tecta
1.87e-86FFCP PHASE1:Mm9::chr1:94627290..94627299,-#_6f69956b8073250c371333dfea6820cep@chr1:94627290..94627299, -
1.87e-86FFCP PHASE1:Mm9::chr8:125802236..125802251,-#_6f69956b8073250c371333dfea6820cep3@Fanca
1.87e-86FFCP PHASE2:Mm9::chr10:81091447..81091464,+#_6f69956b8073250c371333dfea6820cep9@Ankrd24
1.87e-86FFCP PHASE1:Mm9::chr2:121206677..121206683,-#_6f69956b8073250c371333dfea6820cep3@Strc
1.87e-86FFCP PHASE2:Mm9::chr1:78523144..78523177,+#_6f69956b8073250c371333dfea6820cep@chr1:78523144..78523177, +
1.87e-86FFCP PHASE2:Mm9::chr7:53496326..53496340,+#_6f69956b8073250c371333dfea6820cep1@Otog
1.87e-86FFCP PHASE1:Mm9::chr9:92087926..92087938,+#_6f69956b8073250c371333dfea6820cep2@Plscr5
1.87e-86FFCP PHASE2:Mm9::chr5:3909310..3909321,+#_6f69956b8073250c371333dfea6820cep@chr5:3909310..3909321, +
1.87e-86FFCP PHASE1:Mm9::chr11:89702580..89702593,-#_6f69956b8073250c371333dfea6820cep@chr11:89702580..89702593, -
1.87e-86FFCP PHASE2:Mm9::chr1:172843847..172843880,-#_6f69956b8073250c371333dfea6820cep@chr1:172843847..172843880, -
1.87e-86FFCP PHASE1:Mm9::chr9:42207397..42207408,-#_6f69956b8073250c371333dfea6820cep@chr9:42207397..42207408, -
1.87e-86FFCP PHASE1:Mm9::chr1:78523144..78523177,+#_6f69956b8073250c371333dfea6820cep@chr1:78523144..78523177, +
1.87e-86FFCP PHASE2:Mm9::chr6:30619443..30619450,-#_6f69956b8073250c371333dfea6820cep13@Tsga14
1.87e-86FFCP PHASE2:Mm9::chr2:67011921..67011934,+#_6f69956b8073250c371333dfea6820cep2@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr9:42207965..42207978,-#_6f69956b8073250c371333dfea6820cep5@Tecta
1.87e-86FFCP PHASE1:Mm9::chr3:154459246..154459253,+#_6f69956b8073250c371333dfea6820cep@chr3:154459246..154459253, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0003067&oldid=3277502"