UBERON:0004209
From FANTOM5_SSTAR
Name: | renal vesicle |
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Namespace: | FANTOM |
Definition: | "The renal vesicle is the primordial structure of the nephron epithelium, and is formed by the condensation of mesenchymal cells. " [GO:0072077] |
Synonyms: | "stage I nephron" EXACT ZFA:0005586 |
Comments: | Editor notes: note that this class includes both metanephric and mesonephric vesicles - ZFA and EHDAA2 associations are placed with these classes. TODO - make a more specific develops_from relationship - see UBERON:0005107 |
Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.
link to ontology dataset
data
Parents
is_a: | UBERON:0007497(developing epithelial placode),UBERON:0007503(epithelial vesicle) |
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develops_from: | UBERON:0004208(nephrogenic mesenchyme) |
part_of: | UBERON:0010536(nephron progenitor) |
Children
develops from: | UBERON:0004198 (comma-shaped body),UBERON:0010532 (primitive nephron) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004209 (renal vesicle), sorted by p-values
Analyst: Hideya Kawaji
link to source dataset
human : data
mouse : data
P-value | FFCP | Short description |
---|---|---|
6.87e-64 | FFCP PHASE1:Hg19::chr2:120409486..120409492,+#_2c37c430723ed188cee7769131b6ee56 | p@chr2:120409486..120409492, + |
6.87e-64 | FFCP PHASE2:Hg19::chr2:120409486..120409492,+#_2c37c430723ed188cee7769131b6ee56 | p@chr2:120409486..120409492, + |
9.62e-40 | FFCP PHASE2:Hg19::chr1:94713418..94713436,+#_be70af6ff884ac6f15aaff1dacfe819c | p1@ENST00000413103 |
9.62e-40 | FFCP PHASE1:Hg19::chr1:94713418..94713436,+#_be70af6ff884ac6f15aaff1dacfe819c | p1@ENST00000413103 |
1.16e-36 | FFCP PHASE2:Hg19::chr17:79426453..79426462,+#_a6382e286dbdf1b5d2081fb4cb4af070 | p@chr17:79426453..79426462, + |
1.16e-36 | FFCP PHASE1:Hg19::chr17:79426453..79426462,+#_a6382e286dbdf1b5d2081fb4cb4af070 | p@chr17:79426453..79426462, + |
1.31e-36 | FFCP PHASE2:Hg19::chr8:77557753..77557755,-#_61498b375dc84a822ddbd50162324775 | p@chr8:77557753..77557755, - |
1.31e-36 | FFCP PHASE1:Hg19::chr8:77557753..77557755,-#_61498b375dc84a822ddbd50162324775 | p@chr8:77557753..77557755, - |
5.58e-32 | FFCP PHASE1:Hg19::chr1:32042764..32042776,+#_2392da3b90616dd328db4ebaddbc500f | p6@TINAGL1 |
5.58e-32 | FFCP PHASE2:Hg19::chr1:32042764..32042776,+#_2392da3b90616dd328db4ebaddbc500f | p6@TINAGL1 |
1.53e-30 | FFCP PHASE1:Hg19::chr15:91416076..91416089,+#_b9a660d495a350ee924a854156fcafdb | p9@FURIN |
1.53e-30 | FFCP PHASE2:Hg19::chr15:91416076..91416089,+#_b9a660d495a350ee924a854156fcafdb | p9@FURIN |
3.83e-30 | FFCP PHASE2:Hg19::chr20:6034598..6034603,-#_888028d57e6b6ea0cc9e5044ba6ffb8b | p7@LRRN4 |
3.83e-30 | FFCP PHASE1:Hg19::chr20:6034598..6034603,-#_888028d57e6b6ea0cc9e5044ba6ffb8b | p7@LRRN4 |
1.78e-29 | FFCP PHASE1:Hg19::chr22:47030082..47030087,+#_908f1ab254a86780c2bcd5b584a1faa8 | p@chr22:47030082..47030087, + |
1.78e-29 | FFCP PHASE2:Hg19::chr22:47030082..47030087,+#_908f1ab254a86780c2bcd5b584a1faa8 | +, p@chr22:47030082..47030087 |
1.78e-29 | FFCP PHASE2:Hg19::chr1:42777312..42777314,+#_908f1ab254a86780c2bcd5b584a1faa8 | +, p@chr1:42777312..42777314 |
1.78e-29 | FFCP PHASE2:Hg19::chr2:26700984..26700993,-#_908f1ab254a86780c2bcd5b584a1faa8 | p7@OTOF |
1.78e-29 | FFCP PHASE2:Hg19::chr2:26700331..26700340,-#_908f1ab254a86780c2bcd5b584a1faa8 | p@chr2:26700331..26700340, - |
1.78e-29 | FFCP PHASE2:Hg19::chr6:18225523..18225534,-#_908f1ab254a86780c2bcd5b584a1faa8 | p@chr6:18225523..18225534, - |
1.78e-29 | FFCP PHASE1:Hg19::chr6:18225523..18225534,-#_908f1ab254a86780c2bcd5b584a1faa8 | p@chr6:18225523..18225534, - |
1.78e-29 | FFCP PHASE1:Hg19::chr2:26700984..26700993,-#_908f1ab254a86780c2bcd5b584a1faa8 | p7@OTOF |
1.78e-29 | FFCP PHASE1:Hg19::chr1:42777312..42777314,+#_908f1ab254a86780c2bcd5b584a1faa8 | p@chr1:42777312..42777314, + |
1.78e-29 | FFCP PHASE1:Hg19::chr2:26700331..26700340,-#_908f1ab254a86780c2bcd5b584a1faa8 | p@chr2:26700331..26700340, - |
7.96e-27 | FFCP PHASE1:Hg19::chr10:3477893..3477912,-#_d6eed8dd14fec1a57a2250b83477a28b | p@chr10:3477893..3477912, - |
7.96e-27 | FFCP PHASE2:Hg19::chr10:3477893..3477912,-#_d6eed8dd14fec1a57a2250b83477a28b | p@chr10:3477893..3477912, - |
6.29e-26 | FFCP PHASE1:Hg19::chr1:172926077..172926120,-#_738f99ca439b716f5376a47eba1cbcd2 | p@chr1:172926077..172926120, - |
6.29e-26 | FFCP PHASE2:Hg19::chr1:172926077..172926120,-#_738f99ca439b716f5376a47eba1cbcd2 | p@chr1:172926077..172926120, - |
6.32e-26 | FFCP PHASE2:Hg19::chrX:128782722..128782738,-#_a41099eee94908a51cc8a52e21fb7ed7 | p5@APLN |
6.32e-26 | FFCP PHASE1:Hg19::chrX:128782722..128782738,-#_a41099eee94908a51cc8a52e21fb7ed7 | p5@APLN |
9.89e-26 | FFCP PHASE2:Hg19::chr2:693380..693398,+#_62f44026e6e772a4ddba62ffef7db8d7 | p@chr2:693380..693398, + |
9.89e-26 | FFCP PHASE1:Hg19::chr2:693380..693398,+#_62f44026e6e772a4ddba62ffef7db8d7 | p@chr2:693380..693398, + |
1.28e-23 | FFCP PHASE2:Hg19::chr6:84849252..84849259,+#_5c8ffea96fb24557565cceb0b47707cf | p@chr6:84849252..84849259, + |
1.28e-23 | FFCP PHASE1:Hg19::chr6:84849252..84849259,+#_5c8ffea96fb24557565cceb0b47707cf | p@chr6:84849252..84849259, + |
1.28e-23 | FFCP PHASE1:Hg19::chr2:133426030..133426041,-#_5c8ffea96fb24557565cceb0b47707cf | p@chr2:133426030..133426041, - |
1.28e-23 | FFCP PHASE2:Hg19::chr2:133426030..133426041,-#_5c8ffea96fb24557565cceb0b47707cf | p@chr2:133426030..133426041, - |
1.44e-23 | FFCP PHASE1:Hg19::chr7:28998254..28998261,-#_e2a0a2508ab60241a1199a56699e04ee | p10@TRIL |
1.44e-23 | FFCP PHASE2:Hg19::chr1:51791596..51791607,-#_e2a0a2508ab60241a1199a56699e04ee | p23@TTC39A |
1.44e-23 | FFCP PHASE2:Hg19::chr7:28998254..28998261,-#_e2a0a2508ab60241a1199a56699e04ee | p10@TRIL |
1.44e-23 | FFCP PHASE1:Hg19::chr1:51791596..51791607,-#_e2a0a2508ab60241a1199a56699e04ee | p23@TTC39A |
1.61e-23 | FFCP PHASE2:Hg19::chr15:85403302..85403304,+#_0e6bc5a6ec836d5cc1d023f47e2427f1 | p@chr15:85403302..85403304, + |
1.61e-23 | FFCP PHASE1:Hg19::chr7:4051097..4051112,+#_0e6bc5a6ec836d5cc1d023f47e2427f1 | +, p@chr7:4051097..4051112 |
1.61e-23 | FFCP PHASE2:Hg19::chr7:4051097..4051112,+#_0e6bc5a6ec836d5cc1d023f47e2427f1 | p@chr7:4051097..4051112, + |
1.61e-23 | FFCP PHASE1:Hg19::chr15:85403302..85403304,+#_0e6bc5a6ec836d5cc1d023f47e2427f1 | p@chr15:85403302..85403304, + |
1.8e-23 | FFCP PHASE2:Hg19::chr16:2141529..2141537,+#_e9df6dec30a6e8fa7e2cbc571e98d27b | p@chr16:2141529..2141537, + |
1.8e-23 | FFCP PHASE1:Hg19::chr16:2141529..2141537,+#_e9df6dec30a6e8fa7e2cbc571e98d27b | p@chr16:2141529..2141537, + |
2.92e-22 | FFCP PHASE2:Hg19::chr5:74244100..74244117,+#_7535efc392a784eaf5f537cadbfa46f7 | p@chr5:74244100..74244117, + |
2.92e-22 | FFCP PHASE1:Hg19::chr5:74244100..74244117,+#_7535efc392a784eaf5f537cadbfa46f7 | p@chr5:74244100..74244117, + |
5.69e-22 | FFCP PHASE1:Hg19::chr5:148651758..148651769,-#_4f3b5e662c2a76585b790444f2a0a192 | p@chr5:148651758..148651769, - |
5.69e-22 | FFCP PHASE2:Hg19::chr5:148651758..148651769,-#_4f3b5e662c2a76585b790444f2a0a192 | p@chr5:148651758..148651769, - |
2.9e-21 | FFCP PHASE1:Hg19::chr16:86768403..86768437,+#_6e23282ea5d05012d781d29e27cc2e47 | p@chr16:86768403..86768437, + |
2.9e-21 | FFCP PHASE2:Hg19::chr16:86768403..86768437,+#_6e23282ea5d05012d781d29e27cc2e47 | p@chr16:86768403..86768437, + |
4.78e-21 | FFCP PHASE1:Hg19::chr17:2076002..2076026,-#_4ca89d0ccd55799e5320184d0b6dc7b0 | p@chr17:2076002..2076026, - |
4.78e-21 | FFCP PHASE2:Hg19::chr17:2076002..2076026,-#_4ca89d0ccd55799e5320184d0b6dc7b0 | -, p@chr17:2076002..2076026 |
1.26e-20 | FFCP PHASE1:Hg19::chr1:32712897..32712909,+#_40cdc7d43231e3e268048af041dce42e | p3@FAM167B |
1.26e-20 | FFCP PHASE2:Hg19::chr1:32712897..32712909,+#_40cdc7d43231e3e268048af041dce42e | p3@FAM167B |
2.32e-20 | FFCP PHASE2:Hg19::chr11:124628392..124628427,-#_966bc2426ab5830fc1bb9e9d52161a09 | p@chr11:124628392..124628427, - |
2.32e-20 | FFCP PHASE1:Hg19::chr11:124628392..124628427,-#_966bc2426ab5830fc1bb9e9d52161a09 | p@chr11:124628392..124628427, - |
3.42e-20 | FFCP PHASE1:Hg19::chr3:98591021..98591026,-#_0567382b7c7058264906e7bcb35a5418 | p1@ENST00000487339 |
3.42e-20 | FFCP PHASE2:Hg19::chr3:98591021..98591026,-#_0567382b7c7058264906e7bcb35a5418 | p1@ENST00000487339 |
3.44e-20 | FFCP PHASE1:Hg19::chr19:47231340..47231383,-#_8b2d59947a9f822c6c79e8b359174a0a | p@chr19:47231340..47231383, - |
3.44e-20 | FFCP PHASE2:Hg19::chr19:47231340..47231383,-#_8b2d59947a9f822c6c79e8b359174a0a | p@chr19:47231340..47231383, - |
3.58e-20 | FFCP PHASE2:Hg19::chr19:1826957..1826984,-#_526136fcb33d10e19c62b4ed5226b243 | p@chr19:1826957..1826984, - |
3.58e-20 | FFCP PHASE1:Hg19::chr19:1826957..1826984,-#_526136fcb33d10e19c62b4ed5226b243 | p@chr19:1826957..1826984, - |
4.39e-20 | FFCP PHASE2:Hg19::chr4:38057595..38057624,-#_309ec1f01286eeb09a36f3b50be0ac32 | p@chr4:38057595..38057624, - |
4.39e-20 | FFCP PHASE1:Hg19::chr4:38057595..38057624,-#_309ec1f01286eeb09a36f3b50be0ac32 | p@chr4:38057595..38057624, - |
7.13e-20 | FFCP PHASE1:Hg19::chr2:133426106..133426117,-#_f68f7d14345215f83342f048020dd227 | p@chr2:133426106..133426117, - |
7.13e-20 | FFCP PHASE2:Hg19::chr2:133426106..133426117,-#_f68f7d14345215f83342f048020dd227 | p@chr2:133426106..133426117, - |
7.84e-20 | FFCP PHASE1:Hg19::chr9:35753821..35753835,-#_d26403ab91a979cb8e3320c99acd137a | p@chr9:35753821..35753835, - |
7.84e-20 | FFCP PHASE1:Hg19::chr15:36653709..36653720,-#_d26403ab91a979cb8e3320c99acd137a | p@chr15:36653709..36653720, - |
7.84e-20 | FFCP PHASE2:Hg19::chr9:35753821..35753835,-#_d26403ab91a979cb8e3320c99acd137a | p@chr9:35753821..35753835, - |
7.84e-20 | FFCP PHASE2:Hg19::chr15:36653709..36653720,-#_d26403ab91a979cb8e3320c99acd137a | p@chr15:36653709..36653720, - |
8.62e-20 | FFCP PHASE2:Hg19::chr4:145568170..145568180,-#_a85f81853b5fb9a2e647b8792afffc7c | p@chr4:145568170..145568180, - |
8.62e-20 | FFCP PHASE1:Hg19::chr4:145568170..145568180,-#_a85f81853b5fb9a2e647b8792afffc7c | p@chr4:145568170..145568180, - |
1.04e-19 | FFCP PHASE2:Hg19::chr19:38397228..38397266,-#_b8700712e088a4d231c578f215353fba | p1@WDR87 |
1.04e-19 | FFCP PHASE1:Hg19::chr19:38397228..38397266,-#_b8700712e088a4d231c578f215353fba | p1@WDR87 |
1.15e-19 | FFCP PHASE2:Hg19::chr14:91270270..91270281,-#_f8e606f9bba856b3ce2fcd8a6941b75a | p@chr14:91270270..91270281, - |
1.15e-19 | FFCP PHASE1:Hg19::chr14:91270270..91270281,-#_f8e606f9bba856b3ce2fcd8a6941b75a | p@chr14:91270270..91270281, - |
2.44e-19 | FFCP PHASE2:Hg19::chr12:52306196..52306215,+#_f07375e17eaafcdce8394d1434ce5a8d | p6@ACVRL1 |
2.44e-19 | FFCP PHASE1:Hg19::chr12:52306196..52306215,+#_f07375e17eaafcdce8394d1434ce5a8d | p6@ACVRL1 |
3.27e-19 | FFCP PHASE1:Hg19::chr3:43538305..43538325,-#_666b8df3b5ee86e43fd252dd91eeb28a | p@chr3:43538305..43538325, - |
3.27e-19 | FFCP PHASE2:Hg19::chr3:43538305..43538325,-#_666b8df3b5ee86e43fd252dd91eeb28a | p@chr3:43538305..43538325, - |
4.64e-19 | FFCP PHASE2:Hg19::chr17:171147..171161,+#_47d30c285a726633e095c245057ca97e | p@chr17:171147..171161, + |
4.64e-19 | FFCP PHASE1:Hg19::chr17:171147..171161,+#_47d30c285a726633e095c245057ca97e | p@chr17:171147..171161, + |
5.39e-19 | FFCP PHASE2:Hg19::chr1:22211913..22211920,+#_7a11c370c32093a82038b23370ab028b | p@chr1:22211913..22211920, + |
5.39e-19 | FFCP PHASE1:Hg19::chr1:22211913..22211920,+#_7a11c370c32093a82038b23370ab028b | p@chr1:22211913..22211920, + |
1.99e-18 | FFCP PHASE2:Hg19::chr7:27219833..27219845,-#_8b5c38414a97e98ddc3167e164f65ba9 | p7@HOXA10 |
1.99e-18 | FFCP PHASE1:Hg19::chr7:27219833..27219845,-#_8b5c38414a97e98ddc3167e164f65ba9 | p7@HOXA10 |
2.69e-18 | FFCP PHASE1:Hg19::chr1:32041957..32041990,+#_437f69039b68a603a7443320ba173005 | p3@TINAGL1 |
2.69e-18 | FFCP PHASE2:Hg19::chr1:32041957..32041990,+#_437f69039b68a603a7443320ba173005 | p3@TINAGL1 |
4.1e-18 | FFCP PHASE1:Hg19::chr6:132270228..132270243,-#_46bb073926f33dca0b244d507842e642 | p17@CTGF |
4.1e-18 | FFCP PHASE2:Hg19::chr6:132270228..132270243,-#_46bb073926f33dca0b244d507842e642 | p17@CTGF |
5.7e-18 | FFCP PHASE2:Hg19::chr11:940729..940745,+#_4f16e872073068a950497cd2235ec0ef | p5@AP2A2 |
5.7e-18 | FFCP PHASE1:Hg19::chr11:940729..940745,+#_4f16e872073068a950497cd2235ec0ef | p5@AP2A2 |
6.5e-18 | FFCP PHASE2:Hg19::chr19:42007093..42007107,-#_b66200b48c2a2eb30ddbb903b71e6353 | p@chr19:42007093..42007107, - |
6.5e-18 | FFCP PHASE1:Hg19::chr19:42007093..42007107,-#_b66200b48c2a2eb30ddbb903b71e6353 | p@chr19:42007093..42007107, - |
6.99e-18 | FFCP PHASE1:Hg19::chrX:128781853..128781866,-#_4cf2c3d56bd6ace541bafa41a145a276 | p@chrX:128781853..128781866, - |
6.99e-18 | FFCP PHASE2:Hg19::chrX:128781853..128781866,-#_4cf2c3d56bd6ace541bafa41a145a276 | p@chrX:128781853..128781866, - |
1.24e-17 | FFCP PHASE2:Hg19::chr16:86604624..86604648,+#_4dbe9cb22c612065409af4327614dd68 | p@chr16:86604624..86604648, + |
1.24e-17 | FFCP PHASE1:Hg19::chr16:86604624..86604648,+#_4dbe9cb22c612065409af4327614dd68 | p@chr16:86604624..86604648, + |