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UBERON:0007497

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Name:developing epithelial placode
Namespace:FANTOM
Definition:"A domain of columnar epithelium in an embryo that represents the early stage of the development of the epithelial component of a new anatomical structure." [JB:DEF]
Xrefs:
links:

AEO:0000112
AEO:0000218

EHDAA2:0003112
Synonyms: "epithelial placode" EXACT [AEO:0000112]
Alt_id: EHDAA2:0003112

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data

Parents

is_a:UBERON:0000485(simple columnar epithelium),UBERON:0001048(primordium)



Children

is a:UBERON:0001049 (neural tube),UBERON:0003050 (olfactory placode),UBERON:0003051 (ear vesicle),UBERON:0003071 (eye primordium),UBERON:0003075 (neural plate),UBERON:0003894 (liver primordium),UBERON:0004209 (renal vesicle),UBERON:0005081 (ureter ureteric bud),UBERON:0010532 (primitive nephron)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples
It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007497 (developing epithelial placode), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data

P-valueFFCPShort description
1.55e-98FFCP PHASE2:Hg19::chr8:90366581..90366594,-#_bb89b382ec01bf7b8e5f3f2edd211187p@chr8:90366581..90366594, -
1.55e-98FFCP PHASE1:Hg19::chr8:90366581..90366594,-#_bb89b382ec01bf7b8e5f3f2edd211187p@chr8:90366581..90366594, -
1.55e-98FFCP PHASE1:Hg19::chr6:21648948..21648949,+#_bb89b382ec01bf7b8e5f3f2edd211187p@chr6:21648948..21648949, +
1.55e-98FFCP PHASE2:Hg19::chr4:70707713..70707716,-#_bb89b382ec01bf7b8e5f3f2edd211187p@chr4:70707713..70707716, -
1.55e-98FFCP PHASE1:Hg19::chr4:70707713..70707716,-#_bb89b382ec01bf7b8e5f3f2edd211187p@chr4:70707713..70707716, -
1.55e-98FFCP PHASE2:Hg19::chr6:21648948..21648949,+#_bb89b382ec01bf7b8e5f3f2edd211187p@chr6:21648948..21648949, +
1.87e-86FFCP PHASE2:Mm9::chr3:106986057..106986062,+#_43170746cb22dd0005a9ffd1c223da97p1@Kcna10
1.87e-86FFCP PHASE2:Mm9::chr2:121206667..121206674,-#_43170746cb22dd0005a9ffd1c223da97p2@Strc
1.87e-86FFCP PHASE1:Mm9::chr19:10536767..10536777,-#_43170746cb22dd0005a9ffd1c223da97p@chr19:10536767..10536777, -
1.87e-86FFCP PHASE2:Mm9::chr16:93971357..93971363,-#_43170746cb22dd0005a9ffd1c223da97p@chr16:93971357..93971363, -
1.87e-86FFCP PHASE2:Mm9::chr18:42158627..42158630,-#_43170746cb22dd0005a9ffd1c223da97p@chr18:42158627..42158630, -
1.87e-86FFCP PHASE2:Mm9::chr8:94180607..94180619,-#_43170746cb22dd0005a9ffd1c223da97p@chr8:94180607..94180619, -
1.87e-86FFCP PHASE1:Mm9::chr15:65641779..65641790,+#_43170746cb22dd0005a9ffd1c223da97p@chr15:65641779..65641790, +
1.87e-86FFCP PHASE2:Mm9::chr14:20649897..20649907,+#_43170746cb22dd0005a9ffd1c223da97p@chr14:20649897..20649907, +
1.87e-86FFCP PHASE2:Mm9::chr13:58283583..58283607,-#_43170746cb22dd0005a9ffd1c223da97p@chr13:58283583..58283607, -
1.87e-86FFCP PHASE2:Mm9::chr19:55255206..55255223,+#_43170746cb22dd0005a9ffd1c223da97p1@Tectb
1.87e-86FFCP PHASE2:Mm9::chr16:96494788..96494801,+#_43170746cb22dd0005a9ffd1c223da97p12@B3galt5
1.87e-86FFCP PHASE2:Mm9::chr1:93235253..93235264,+#_43170746cb22dd0005a9ffd1c223da97p@chr1:93235253..93235264, +
1.87e-86FFCP PHASE2:Mm9::chr1:78523144..78523177,+#_43170746cb22dd0005a9ffd1c223da97p@chr1:78523144..78523177, +
1.87e-86FFCP PHASE1:Mm9::chr1:63733478..63733491,-#_43170746cb22dd0005a9ffd1c223da97p1@Dytn
1.87e-86FFCP PHASE1:Mm9::chr9:66860888..66860899,+#_43170746cb22dd0005a9ffd1c223da97p@chr9:66860888..66860899, +
1.87e-86FFCP PHASE1:Mm9::chr10:107349378..107349390,-#_43170746cb22dd0005a9ffd1c223da97p1@Otogl
1.87e-86FFCP PHASE1:Mm9::chr9:42208142..42208157,-#_43170746cb22dd0005a9ffd1c223da97p10@Tecta
1.87e-86FFCP PHASE2:Mm9::chr4:101908153..101908163,+#_43170746cb22dd0005a9ffd1c223da97p@chr4:101908153..101908163, +
1.87e-86FFCP PHASE1:Mm9::chr12:77084875..77084885,+#_43170746cb22dd0005a9ffd1c223da97p@chr12:77084875..77084885, +
1.87e-86FFCP PHASE1:Mm9::chr11:4689837..4689845,-#_43170746cb22dd0005a9ffd1c223da97p@chr11:4689837..4689845, -
1.87e-86FFCP PHASE2:Mm9::chr19:22767090..22767099,+#_43170746cb22dd0005a9ffd1c223da97p18@Trpm3
1.87e-86FFCP PHASE1:Mm9::chr3:154459231..154459240,+#_43170746cb22dd0005a9ffd1c223da97p@chr3:154459231..154459240, +
1.87e-86FFCP PHASE1:Mm9::chr1:93235228..93235249,+#_43170746cb22dd0005a9ffd1c223da97p@chr1:93235228..93235249, +
1.87e-86FFCP PHASE1:Mm9::chr19:55256373..55256384,+#_43170746cb22dd0005a9ffd1c223da97p@chr19:55256373..55256384, +
1.87e-86FFCP PHASE1:Mm9::chr4:130461150..130461185,+#_43170746cb22dd0005a9ffd1c223da97p@chr4:130461150..130461185, +
1.87e-86FFCP PHASE2:Mm9::chr8:13435173..13435186,+#_43170746cb22dd0005a9ffd1c223da97p6@Fam70b
1.87e-86FFCP PHASE2:Mm9::chr2:14685072..14685084,+#_43170746cb22dd0005a9ffd1c223da97p41@Cacnb2
1.87e-86FFCP PHASE1:Mm9::chr5:147854240..147854249,-#_43170746cb22dd0005a9ffd1c223da97p@chr5:147854240..147854249, -
1.87e-86FFCP PHASE1:Mm9::chr14:63099970..63099980,-#_43170746cb22dd0005a9ffd1c223da97p@chr14:63099970..63099980, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207792..42207805,-#_43170746cb22dd0005a9ffd1c223da97p11@Tecta
1.87e-86FFCP PHASE2:Mm9::chr15:89215306..89215315,+#_43170746cb22dd0005a9ffd1c223da97p@chr15:89215306..89215315, +
1.87e-86FFCP PHASE2:Mm9::chr12:13508046..13508055,+#_43170746cb22dd0005a9ffd1c223da97p@chr12:13508046..13508055, +
1.87e-86FFCP PHASE2:Mm9::chr9:42207983..42207995,-#_43170746cb22dd0005a9ffd1c223da97p3@Tecta
1.87e-86FFCP PHASE2:Mm9::chr17:13983160..13983167,+#_43170746cb22dd0005a9ffd1c223da97p@chr17:13983160..13983167, +
1.87e-86FFCP PHASE2:Mm9::chr11:4689837..4689845,-#_43170746cb22dd0005a9ffd1c223da97p@chr11:4689837..4689845, -
1.87e-86FFCP PHASE1:Mm9::chr13:76964459..76964469,+#_43170746cb22dd0005a9ffd1c223da97p15@Mctp1
1.87e-86FFCP PHASE1:Mm9::chr7:109265277..109265288,-#_43170746cb22dd0005a9ffd1c223da97p4@Chrna10
1.87e-86FFCP PHASE1:Mm9::chr9:42207777..42207789,-#_43170746cb22dd0005a9ffd1c223da97p7@Tecta
1.87e-86FFCP PHASE2:Mm9::chr4:133802857..133802884,+#_43170746cb22dd0005a9ffd1c223da97p@chr4:133802857..133802884, +
1.87e-86FFCP PHASE2:Mm9::chr4:115556972..115556979,+#_43170746cb22dd0005a9ffd1c223da97p3@Kncn
1.87e-86FFCP PHASE1:Mm9::chr11:75421384..75421397,+#_43170746cb22dd0005a9ffd1c223da97p@chr11:75421384..75421397, +
1.87e-86FFCP PHASE1:Mm9::chr14:102297728..102297742,+#_43170746cb22dd0005a9ffd1c223da97p@chr14:102297728..102297742, +
1.87e-86FFCP PHASE1:Mm9::chr7:133957514..133957529,+#_43170746cb22dd0005a9ffd1c223da97p@chr7:133957514..133957529, +
1.87e-86FFCP PHASE1:Mm9::chr15:85334335..85334353,+#_43170746cb22dd0005a9ffd1c223da97p@chr15:85334335..85334353, +
1.87e-86FFCP PHASE2:Mm9::chr10:107349309..107349318,-#_43170746cb22dd0005a9ffd1c223da97p4@Otogl
1.87e-86FFCP PHASE1:Mm9::chr17:31335953..31335957,-#_43170746cb22dd0005a9ffd1c223da97p3@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr10:67371994..67372010,+#_43170746cb22dd0005a9ffd1c223da97p@chr10:67371994..67372010, +
1.87e-86FFCP PHASE2:Mm9::chr13:43699228..43699239,+#_43170746cb22dd0005a9ffd1c223da97p@chr13:43699228..43699239, +
1.87e-86FFCP PHASE2:Mm9::chr11:102123554..102123566,+#_43170746cb22dd0005a9ffd1c223da97p4@BC030867
1.87e-86FFCP PHASE2:Mm9::chrX:154140781..154140788,+#_43170746cb22dd0005a9ffd1c223da97p@chrX:154140781..154140788, +
1.87e-86FFCP PHASE2:Mm9::chr5:144115382..144115389,+#_43170746cb22dd0005a9ffd1c223da97p@chr5:144115382..144115389, +
1.87e-86FFCP PHASE2:Mm9::chr12:109905399..109905416,+#_43170746cb22dd0005a9ffd1c223da97p@chr12:109905399..109905416, +
1.87e-86FFCP PHASE2:Mm9::chr9:41495920..41495928,-#_43170746cb22dd0005a9ffd1c223da97p@chr9:41495920..41495928, -
1.87e-86FFCP PHASE1:Mm9::chr2:121206677..121206683,-#_43170746cb22dd0005a9ffd1c223da97p3@Strc
1.87e-86FFCP PHASE1:Mm9::chr1:182528371..182528385,+#_43170746cb22dd0005a9ffd1c223da97p@chr1:182528371..182528385, +
1.87e-86FFCP PHASE1:Mm9::chr4:154208086..154208123,+#_43170746cb22dd0005a9ffd1c223da97p@chr4:154208086..154208123, +
1.87e-86FFCP PHASE1:Mm9::chr17:13983095..13983100,+#_43170746cb22dd0005a9ffd1c223da97p@chr17:13983095..13983100, +
1.87e-86FFCP PHASE2:Mm9::chr19:4140290..4140321,+#_43170746cb22dd0005a9ffd1c223da97p2@Gpr152
1.87e-86FFCP PHASE2:Mm9::chr1:172843885..172843890,-#_43170746cb22dd0005a9ffd1c223da97p@chr1:172843885..172843890, -
1.87e-86FFCP PHASE2:Mm9::chr17:31335903..31335921,-#_43170746cb22dd0005a9ffd1c223da97p2@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr18:38104702..38104718,-#_43170746cb22dd0005a9ffd1c223da97p@chr18:38104702..38104718, -
1.87e-86FFCP PHASE1:Mm9::chr3:100724698..100724706,+#_43170746cb22dd0005a9ffd1c223da97p@chr3:100724698..100724706, +
1.87e-86FFCP PHASE1:Mm9::chrX:154140800..154140810,+#_43170746cb22dd0005a9ffd1c223da97p@chrX:154140800..154140810, +
1.87e-86FFCP PHASE1:Mm9::chr18:81314626..81314636,+#_43170746cb22dd0005a9ffd1c223da97+, p@chr18:81314626..81314636
1.87e-86FFCP PHASE1:Mm9::chr1:172843885..172843890,-#_43170746cb22dd0005a9ffd1c223da97p@chr1:172843885..172843890, -
1.87e-86FFCP PHASE1:Mm9::chr1:94627290..94627299,-#_43170746cb22dd0005a9ffd1c223da97p@chr1:94627290..94627299, -
1.87e-86FFCP PHASE1:Mm9::chr11:8405038..8405048,-#_43170746cb22dd0005a9ffd1c223da97-, p@chr11:8405038..8405048
1.87e-86FFCP PHASE1:Mm9::chr10:80806020..80806031,-#_43170746cb22dd0005a9ffd1c223da97p3@Gipc3
1.87e-86FFCP PHASE2:Mm9::chr3:35012397..35012405,+#_43170746cb22dd0005a9ffd1c223da97p@chr3:35012397..35012405, +
1.87e-86FFCP PHASE1:Mm9::chr18:66033526..66033539,-#_43170746cb22dd0005a9ffd1c223da97p@chr18:66033526..66033539, -
1.87e-86FFCP PHASE2:Mm9::chr10:80806020..80806031,-#_43170746cb22dd0005a9ffd1c223da97p3@Gipc3
1.87e-86FFCP PHASE2:Mm9::chr5:21371424..21371435,-#_43170746cb22dd0005a9ffd1c223da97p2@Slc26a5
1.87e-86FFCP PHASE2:Mm9::chr9:92087926..92087938,+#_43170746cb22dd0005a9ffd1c223da97p2@Plscr5
1.87e-86FFCP PHASE1:Mm9::chr8:13425469..13425503,+#_43170746cb22dd0005a9ffd1c223da97p@chr8:13425469..13425503, +
1.87e-86FFCP PHASE2:Mm9::chr3:69811590..69811601,+#_43170746cb22dd0005a9ffd1c223da97p1@Otol1
1.87e-86FFCP PHASE1:Mm9::chr10:107156949..107156956,-#_43170746cb22dd0005a9ffd1c223da97p3@Ptprq
1.87e-86FFCP PHASE1:Mm9::chr13:78322370..78322376,-#_43170746cb22dd0005a9ffd1c223da97p4@uc007rhb.1
1.87e-86FFCP PHASE1:Mm9::chr9:42207965..42207978,-#_43170746cb22dd0005a9ffd1c223da97p5@Tecta
1.87e-86FFCP PHASE2:Mm9::chr1:182528371..182528385,+#_43170746cb22dd0005a9ffd1c223da97p@chr1:182528371..182528385, +
1.87e-86FFCP PHASE1:Mm9::chr5:3909310..3909321,+#_43170746cb22dd0005a9ffd1c223da97p@chr5:3909310..3909321, +
1.87e-86FFCP PHASE1:Mm9::chr15:12848147..12848162,+#_43170746cb22dd0005a9ffd1c223da97p@chr15:12848147..12848162, +
1.87e-86FFCP PHASE1:Mm9::chr3:69811590..69811601,+#_43170746cb22dd0005a9ffd1c223da97p1@Otol1
1.87e-86FFCP PHASE1:Mm9::chr14:47293487..47293493,-#_43170746cb22dd0005a9ffd1c223da97p@chr14:47293487..47293493, -
1.87e-86FFCP PHASE2:Mm9::chr15:97806034..97806061,+#_43170746cb22dd0005a9ffd1c223da97p@chr15:97806034..97806061, +
1.87e-86FFCP PHASE2:Mm9::chr8:13414266..13414279,+#_43170746cb22dd0005a9ffd1c223da97p@chr8:13414266..13414279, +
1.87e-86FFCP PHASE2:Mm9::chr10:107349430..107349440,-#_43170746cb22dd0005a9ffd1c223da97p3@Otogl
1.87e-86FFCP PHASE2:Mm9::chr9:42207397..42207408,-#_43170746cb22dd0005a9ffd1c223da97p@chr9:42207397..42207408, -
1.87e-86FFCP PHASE1:Mm9::chr2:14685072..14685084,+#_43170746cb22dd0005a9ffd1c223da97p41@Cacnb2
1.87e-86FFCP PHASE1:Mm9::chr6:113251614..113251623,+#_43170746cb22dd0005a9ffd1c223da97p@chr6:113251614..113251623, +
1.87e-86FFCP PHASE1:Mm9::chr11:120222470..120222516,+#_43170746cb22dd0005a9ffd1c223da97p2@Fscn2
1.87e-86FFCP PHASE2:Mm9::chr11:4689776..4689785,-#_43170746cb22dd0005a9ffd1c223da97p@chr11:4689776..4689785, -
1.87e-86FFCP PHASE2:Mm9::chr6:30619378..30619412,-#_43170746cb22dd0005a9ffd1c223da97p11@Tsga14
1.87e-86FFCP PHASE1:Mm9::chr9:42207375..42207384,-#_43170746cb22dd0005a9ffd1c223da97p@chr9:42207375..42207384, -
1.87e-86FFCP PHASE2:Mm9::chr2:67011956..67011967,+#_43170746cb22dd0005a9ffd1c223da97p1@Gm1322

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